Os02g0248200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os02g0248200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283.05 | 0.79 | 5.11 | 0.221 | 3.79 | -1.87 | -0.0148 | 1.19 | -0.348 | 12.5 | 1 | 4 | -- | -- |
| 284.08 | 0.785 | 5.14 | -0.000581 | 3.83 | -1.89 | 0.25 | -- | -0.397 | 12.5 | -5.702 | 252 | -- | -- |
| 283.07 | 0.784 | 5.12 | 0.209 | 3.8 | -1.87 | -- | 1.1 | -0.358 | 12.5 | -7.136 | 263 | -- | -- |
| 284.01 | 0.785 | 5.14 | 0.0385 | 3.8 | -1.85 | -- | -- | -0.397 | 12.5 | -5.412 | 258 | -- | -- |
| 900.49 | 1.4 | 5.1 | 0.766 | -- | -3.77 | -- | 1.06 | -0.0548 | -- | 5.631 | 899 | -- | -- |
| 320 | 0.839 | 5.19 | -0.359 | 3.58 | -- | -0.00771 | -- | -0.66 | 12 | -- | -- | -- | -- |
| 320 | 0.838 | 5.19 | -0.359 | 3.58 | -- | -- | -- | -0.66 | 12 | -- | -- | -- | -- |
| 900.67 | 1.4 | 5.13 | 0.538 | -- | -3.56 | -- | -- | -0.109 | -- | 15.8 | 900 | -- | -- |
| 284.04 | 0.785 | 5.14 | -- | 3.8 | -1.83 | -- | -- | -0.404 | 12.5 | -5.573 | 258 | -- | -- |
| 1127.53 | 1.57 | 5.26 | -0.47 | -- | -- | -- | -- | -0.71 | -- | -- | -- | -- | -- |
| 323.4 | 0.841 | 5.18 | -- | 3.59 | -- | -- | -- | -0.62 | 12 | -- | -- | -- | -- |
| 907.65 | 1.4 | 5.15 | -- | -- | -3.31 | -- | -- | -0.197 | -- | 16.14 | 898 | -- | -- |
| 1133.35 | 1.57 | 5.25 | -- | -- | -- | -- | -- | -0.658 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 270.22 | humidity | 70 | 30 | > th | dose dependent | rect. | 18 | 2 |
| 2 | 271.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 5 | 273.21 | temperature | 10 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 6 | 273.26 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 2 |
| 19 | 275.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 25 | 276.86 | humidity | 70 | 90 | > th | dose independent | rect. | 18 | 2 |
| 37 | 277.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 21 |
| 44 | 278.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 19 |
| 53 | 278.81 | temperature | 15 | 90 | > th | dose dependent | rect. | 2 | 16 |
| 56 | 279.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 64 | 279.43 | humidity | 50 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 65 | 279.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 88 | 280.36 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 22 |
| 109 | 281.00 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 113 | 281.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 117 | 281.17 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 22 |
| 122 | 281.37 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 127 | 281.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 140 | 281.76 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 16 |
| 145 | 281.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 147 | 281.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 165 | 282.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 200 | 282.42 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 211 | 282.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 269 | 282.89 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 10 |
| 284 | 283.05 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 289 | 283.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 331 | 283.39 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 351 | 283.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 356 | 283.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 359 | 283.66 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 361 | 283.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 365 | 283.72 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 390 | 283.86 | radiation | 1 | 720 | > th | dose independent | rect. | 6 | 13 |
| 412 | 283.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 20 |
| 422 | 283.96 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 443 | 284.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 477 | 284.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 479 | 284.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 484 | 284.18 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 533 | 284.30 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 544 | 284.34 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 561 | 284.39 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 562 | 284.40 | temperature | 20 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 566 | 284.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 23 |
| 581 | 284.48 | temperature | 20 | 4320 | < th | dose dependent | rect. | 20 | 7 |
| 584 | 284.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 586 | 284.49 | radiation | 1 | 720 | < th | dose independent | rect. | 4 | 22 |
| 612 | 284.54 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 723 | 284.85 | radiation | 1 | 720 | < th | dose independent | rect. | 4 | 16 |
| 848 | 285.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 16 |
| 874 | 285.20 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 880 | 285.22 | radiation | 20 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 943 | 285.39 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 21 |
| 954 | 285.41 | radiation | 10 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 958 | 285.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 18 |
| 962 | 285.42 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 19 | 1 |