BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0504000 Os09g0504000|AK068607
(498 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0504000 Similar to Nucleotide sugar epimerase-like pro... 760 0.0
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 651 0.0
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 485 e-137
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 452 e-127
Os06g0187200 Similar to Nucleotide sugar epimerase-like pro... 396 e-110
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 93 4e-19
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 88 2e-17
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 80 3e-15
Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 77 3e-14
Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 77 4e-14
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 75 2e-13
Os01g0837300 UDP-glucuronic acid decarboxylase 67 3e-11
Os04g0618200 UDP-glucose 4-epimerase family protein 67 3e-11
>Os09g0504000 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 498
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/469 (82%), Positives = 387/469 (82%)
Query: 1 MPADAAAKGMKLERYXXXXXXXXXXXXXXXXKVVSASSHLLFRATVLATMALVFLFTFHY 60
MPADAAAKGMKLERY KVVSASSHLLFRATVLATMALVFLFTFHY
Sbjct: 1 MPADAAAKGMKLERYASGAGAMLLLRRAASGKVVSASSHLLFRATVLATMALVFLFTFHY 60
Query: 61 PSLLSRSFTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEKEVRRSAKP 120
PSLLSRSFTL WEKEVRRSAKP
Sbjct: 61 PSLLSRSFTLSSGAGAGEGGAAAHASHRSLLMSSSSASASAASVYGGAAWEKEVRRSAKP 120
Query: 121 RKDGGIAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVL 180
RKDGGIAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVL
Sbjct: 121 RKDGGIAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVL 180
Query: 181 VLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAK 240
VLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAK
Sbjct: 181 VLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAK 240
Query: 241 HADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHTYNHIYGLSI 300
HADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHTYNHIYGLSI
Sbjct: 241 HADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHTYNHIYGLSI 300
Query: 301 TGLRFFTVYGPWGRPDMAYFFFAKSIVSGEPITLFXXXXXXXXXXXFTYIDDVVKGCLGA 360
TGLRFFTVYGPWGRPDMAYFFFAKSIVSGEPITLF FTYIDDVVKGCLGA
Sbjct: 301 TGLRFFTVYGPWGRPDMAYFFFAKSIVSGEPITLFRAADGADARRDFTYIDDVVKGCLGA 360
Query: 361 LDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPSN 420
LD PAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPSN
Sbjct: 361 LDTSGKSTGSSKSGKKSGPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPSN 420
Query: 421 GDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYYKLKLDVPKI 469
GDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYYKLKLDVPKI
Sbjct: 421 GDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYYKLKLDVPKI 469
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/466 (71%), Positives = 352/466 (75%), Gaps = 10/466 (2%)
Query: 4 DAAAKGMKLERYXXXXXXXXXXXXXXXXKVVSASSHLLFRATVLATMALVFLFTFHYPSL 63
DAAAKG+KL K++SASSHLLFRAT+LAT+ LV LFT HYPSL
Sbjct: 9 DAAAKGVKLG---GGGGGALMVRRVASGKLLSASSHLLFRATILATLCLVCLFTVHYPSL 65
Query: 64 LSRSFTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEKEVRRSAKPRKD 123
LS SF L WEKEVRRSA PR+D
Sbjct: 66 LSHSFHLSSAAAAANGKHRAASRSSHRSLLGSSAAVAYGGAA----WEKEVRRSAAPRRD 121
Query: 124 GGIAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVLVLD 183
GG++VLVTGAAGFVG HCSLALRARGDGV+GLDNFN+YYDP LKRARQRLLA RGV VLD
Sbjct: 122 GGLSVLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSYYDPSLKRARQRLLASRGVAVLD 181
Query: 184 ADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHAD 243
ADINDA LLE+LFD FTHVLHLAAQAGVRYAM APQTYVASNVAGLV+V EVAAKHAD
Sbjct: 182 ADINDAALLERLFDAARFTHVLHLAAQAGVRYAMRAPQTYVASNVAGLVSVFEVAAKHAD 241
Query: 244 PQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHTYNHIYGLSITGL 303
PQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAH YNHIYGLSITGL
Sbjct: 242 PQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHAYNHIYGLSITGL 301
Query: 304 RFFTVYGPWGRPDMAYFFFAKSIVSGEPITLFXXXXXXXXXXXFTYIDDVVKGCLGALDX 363
RFFTVYGPWGRPDMAYF FA+SIV+GEPITLF FTYIDDVVKGCLGALD
Sbjct: 302 RFFTVYGPWGRPDMAYFSFARSIVAGEPITLFRTADGADARRDFTYIDDVVKGCLGALD- 360
Query: 364 XXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPSNGDV 423
PAPLRVYNLGNTSPVPVTRMVAILEKLLG+KANKR+V MPSNGDV
Sbjct: 361 TAGESTGTKSGKKRGPAPLRVYNLGNTSPVPVTRMVAILEKLLGRKANKRVVTMPSNGDV 420
Query: 424 PFTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYYKLKLDVPKI 469
PFTHANV+HAA DFGYRP T LDAGLR FVDWF YY KLD KI
Sbjct: 421 PFTHANVSHAARDFGYRPATPLDAGLRRFVDWFVHYY--KLDTAKI 464
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/357 (65%), Positives = 273/357 (76%), Gaps = 9/357 (2%)
Query: 110 WEKEVRRSAKPRK------DGGIAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYD 163
WE+++R SA PR+ G++VLVTGAAGFVGTHCSLALR RGDGV+G+DNFN+YYD
Sbjct: 75 WERQIRASAAPRRPPGSAAGAGMSVLVTGAAGFVGTHCSLALRKRGDGVVGIDNFNSYYD 134
Query: 164 PELKRARQRLLAGRGVLVLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTY 223
P LK+AR+ LLA GV V++ DIND LL KLFD+VPFTHVLHLAAQAGVRYAME P +Y
Sbjct: 135 PSLKKARRSLLASHGVFVIEGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASY 194
Query: 224 VASNVAGLVTVLEVAAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKK 283
V SN+AGLVT+LE A K ADPQPAIVWASSSSVYGLN PF+E RTD+PASLYAATKK
Sbjct: 195 VHSNIAGLVTLLE-ACKDADPQPAIVWASSSSVYGLNDKVPFTESDRTDQPASLYAATKK 253
Query: 284 AGEAIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFAKSIVSGEPITLFXXXXXXXX 343
AGE I HTYNHIYGLSITGLRFFTVYGPWGRPDMAYF F ++I+ G+PIT++
Sbjct: 254 AGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNRVDL 313
Query: 344 XXXFTYIDDVVKGCLGALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILE 403
FTYIDD+VKGCLG+LD PAP R++NLGNTSPV V +V+ILE
Sbjct: 314 ARDFTYIDDIVKGCLGSLD--TAGKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILE 371
Query: 404 KLLGKKANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYY 460
K L KA K +V MP NGDVPFTHAN++ A GY+PTT+LD GL+ FV W+ YY
Sbjct: 372 KHLRVKAKKNVVEMPGNGDVPFTHANISLARQQLGYKPTTNLDVGLKKFVKWYLSYY 428
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/356 (64%), Positives = 265/356 (74%), Gaps = 9/356 (2%)
Query: 111 EKEVRRSAKPRKDGG--IAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKR 168
EK+VR SA+ R+ G + VLVTGAAGFVG H + ALR RGDGVLGLDNFN YYDP LKR
Sbjct: 102 EKKVRASARVRRANGRGLTVLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKR 161
Query: 169 ARQRLLAGRGVLVLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNV 228
R LLA GV V+D DI DA LL KLFD+VPFTHVLHLAAQAGVR+A+ P +YV +NV
Sbjct: 162 GRAALLARSGVYVVDGDIADAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANV 221
Query: 229 AGLVTVLEVAAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAI 288
G V +LE AA+ A+PQPAIVWASSSSVYGLN+ PFSE RTDRPASLYAATKKAGE I
Sbjct: 222 GGFVALLE-AARMANPQPAIVWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEI 280
Query: 289 AHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFAKSIVSGEPITLFXX----XXXXXXX 344
AH YNHIYGLS+T LRFFTVYGPWGRPDMAYFFF + I++G PIT++
Sbjct: 281 AHAYNHIYGLSLTALRFFTVYGPWGRPDMAYFFFTRDILAGRPITVYESAGGGTHQTTIS 340
Query: 345 XXFTYIDDVVKGCLGALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEK 404
FTYIDD+VKGC+GALD PAP R YNLGNTSPVPVT++V +LEK
Sbjct: 341 RDFTYIDDIVKGCVGALD--TAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEK 398
Query: 405 LLGKKANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYY 460
LL KA ++IV MP NGDVP+THAN++ A + GYRP+T L G++ FV W+ +YY
Sbjct: 399 LLKVKAVRKIVKMPRNGDVPYTHANISLAQRELGYRPSTDLQTGVKKFVRWYLEYY 454
>Os06g0187200 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 309
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/299 (64%), Positives = 226/299 (75%), Gaps = 3/299 (1%)
Query: 162 YDPELKRARQRLLAGRGVLVLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQ 221
YDP LK+AR+ LL GV V+D DIND LL KLFD+VPFTHVLHLAAQAGVRYAME P
Sbjct: 1 YDPSLKKARRALLGSHGVFVVDGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPS 60
Query: 222 TYVASNVAGLVTVLEVAAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAAT 281
+YV SNVAGLV++LE + K ADPQPA+VWASSSSVYGLN PFSE HRTD+PASLYAAT
Sbjct: 61 SYVRSNVAGLVSLLE-SCKDADPQPAVVWASSSSVYGLNDAVPFSEAHRTDKPASLYAAT 119
Query: 282 KKAGEAIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFAKSIVSGEPITLFXXXXXX 341
KKAGEAI HTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFF ++I+ G+P+T++
Sbjct: 120 KKAGEAITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRNILQGKPVTVYRGRDHV 179
Query: 342 XXXXXFTYIDDVVKGCLGALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAI 401
FTYIDD+V+GCL ALD AP R++NLGNTSPV V +VA+
Sbjct: 180 DIARDFTYIDDIVRGCLAALDTAGRSTGGGGRKRGA--APYRIFNLGNTSPVTVPALVAM 237
Query: 402 LEKLLGKKANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYY 460
LE+ L KA + +V MP NGDVPFTHAN++ A GY+PTTSL+ GL+ FV W+ YY
Sbjct: 238 LERCLMVKARRHVVEMPGNGDVPFTHANISLAREQLGYKPTTSLEMGLKKFVRWYLSYY 296
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 145/346 (41%), Gaps = 35/346 (10%)
Query: 128 VLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAG---RGVLVLDA 184
VLVTG AG++G+H L L A G V+ D+ EL R LAG R + +
Sbjct: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGN--SSELAVRRVAALAGDKARNLSLHKV 77
Query: 185 DINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADP 244
DI D LEK+F F V+H A V +++ P Y NVAG + +LEV A H
Sbjct: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCK 137
Query: 245 QPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAH-TYNHIYGLSITGL 303
+ +V++SS++VYG ++P +EE P + Y TK E I Y+ SI L
Sbjct: 138 K--LVFSSSAAVYGSPKNSPCTEEFPLT-PHNPYGRTKLIAEEICRDIYHSDSEWSIILL 194
Query: 304 RFFTVYG----------PWGRPDMAYFFFAKSIVSGEP-ITLFX---XXXXXXXXXXFTY 349
R+F G P G P+ F + V P +T+F + +
Sbjct: 195 RYFNPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIH 254
Query: 350 IDDVVKGCLGALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEKLLGKK 409
+ D+ +G + AL + YNLG V +V EK+ GKK
Sbjct: 255 VVDLAEGHIAALRKLFESSIG-----------CQAYNLGTGKGTSVLEIVNAFEKVSGKK 303
Query: 410 ANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDW 455
++ GD ++ A +F ++ ++ R +W
Sbjct: 304 I-PLVIGPRRPGDAEILFSSAAKAEREFKWKAKYGIEEMCRDQWNW 348
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 141/346 (40%), Gaps = 33/346 (9%)
Query: 128 VLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVLVLD---A 184
+LVTG AG++G+H L L G V+ LDN + EL R R LAG LD
Sbjct: 9 ILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNA--SELAILRVRELAGHNANNLDFRKV 66
Query: 185 DINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADP 244
D+ D L+++F F V+H A V +++ P Y +N+ G +T+L+V A H
Sbjct: 67 DLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCT 126
Query: 245 QPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHT-YNHIYGLSITGL 303
+ +V++SS++VYG + P +EE + Y TK E + + I L
Sbjct: 127 K--LVFSSSATVYGWPKEVPCTEESPL-CAMNPYGRTKLVIEDMCRDLHASDPNWKIILL 183
Query: 304 RFFTVYG----------PWGRPDMAYFFFAKSIVSGEP-ITLFXX---XXXXXXXXXFTY 349
R+F G P G P+ F + V P +T++ + +
Sbjct: 184 RYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIH 243
Query: 350 IDDVVKGCLGALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEKLLGKK 409
+ D+ G + AL VYNLG V MVA EK GKK
Sbjct: 244 VVDLADGHIAALRKLYEDSDRIG---------CEVYNLGTGKGTSVLEMVAAFEKASGKK 294
Query: 410 ANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDW 455
+ A GD +A A + ++ ++ R +W
Sbjct: 295 I-PLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNW 339
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 139/351 (39%), Gaps = 35/351 (9%)
Query: 124 GGI-AVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAG---RGV 179
GG+ VLVTG AG++G+H L L G + +DN N EL R LAG R +
Sbjct: 9 GGVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNN--SSELAVRRVAALAGDHSRNL 66
Query: 180 LVLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAA 239
D+ D LEK+F F V+H A V +++ P Y +NV G V +LEV +
Sbjct: 67 AFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMS 126
Query: 240 KHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAH-TYNHIYGL 298
H + +V++SS++VYG ++P +EE P + Y TK E I Y
Sbjct: 127 AHGCKK--LVFSSSAAVYGSPKNSPCTEEFPL-TPNNPYGKTKLVVEDICRDIYRTDPEW 183
Query: 299 SITGLRFFTVYG----------PWGRPDMAYFFFAKSIVSGEP-ITLFXX---XXXXXXX 344
I LR+F G P G P+ + + V P +T+
Sbjct: 184 KIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGV 243
Query: 345 XXFTYIDDVVKGCLGALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEK 404
+ ++ D+ G + AL YNLG V +V EK
Sbjct: 244 RDYIHVVDLADGHIAALQKLFESSSIG----------CEAYNLGTGKGTSVLEIVKAFEK 293
Query: 405 LLGKKANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLRHFVDW 455
GKK I+ GD + A + ++ +D R +W
Sbjct: 294 ASGKKI-PLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGIDEMCRDQWNW 343
>Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 425
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 131/338 (38%), Gaps = 42/338 (12%)
Query: 126 IAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVLVLDAD 185
+ VLVTG AGFVG+H L RGD V+ +DNF + LA V+ D
Sbjct: 113 LRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHH----LANPRFEVIRHD 168
Query: 186 INDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADPQ 245
+ + +LLE + HLA A + P + +NV G + +L +A +
Sbjct: 169 VVEPILLE-------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIG--- 218
Query: 246 PAIVWASSSSVYGLNTDAPFSEEHRTD-RP---ASLYAATKKAGEAIAHTYNHIYGLSIT 301
+ S+S VYG P E + + P S Y K+ E + Y+ L +
Sbjct: 219 AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVR 278
Query: 302 GLRFFTVYGPWGRPDMAYFF--FAKSIVSGEPITLFXXXXXXXXXXXFTYIDDVVKGCLG 359
R F YGP D F + EP+T++ F Y+ D+V+G +
Sbjct: 279 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY---GDGKQTRSFQYVSDLVEGLMS 335
Query: 360 ALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPS 419
++ + +NLGN + + +++ + N RI P+
Sbjct: 336 LMEGEH----------------IGPFNLGNPGEFTMLELAKVVQDTI--DPNARIEFRPN 377
Query: 420 NGDVPFTHA-NVTHAAHDFGYRPTTSLDAGLRHFVDWF 456
D P ++T A G+ P L GL V F
Sbjct: 378 TADDPHKRKPDITRAKELLGWEPKVPLREGLPLMVTDF 415
>Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 396
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 139/347 (40%), Gaps = 45/347 (12%)
Query: 126 IAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVLVLDAD 185
+ V+VTG AGFVG+H L ARGD V+ +DNF K R LA ++ D
Sbjct: 85 LRVVVTGGAGFVGSHLVDELLARGDSVIVVDNFFTGR----KENVARHLADPRFELIRHD 140
Query: 186 INDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADPQ 245
+ + +LLE + HLA A + P + +NV G + +L +A +
Sbjct: 141 VVEPILLE-------VDQIYHLACPASPVHYKFNPIKTIKTNVMGTLNMLGLAKRVG--- 190
Query: 246 PAIVWASSSSVYGLNTDAPFSEEHRTD-RP---ASLYAATKKAGEAIAHTYNHIYGLSIT 301
+ S+S VYG + P E + P S Y K+ E + Y+ G+ +
Sbjct: 191 ARFLLTSTSEVYGDPLEHPQKESYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 250
Query: 302 GLRFFTVYGPWGRPDMAYFF--FAKSIVSGEPITLFXXXXXXXXXXXFTYIDDVVKGCLG 359
R F YGP D F + +P+T++ F Y+ D+V G +
Sbjct: 251 IARIFNTYGPRMCLDDGRVVSNFVAQTLRKQPMTVY---GDGKQTRSFQYVSDLVDGLIT 307
Query: 360 ALDXXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPS 419
++ + +NLGN + + ++++ + A R+ P+
Sbjct: 308 LMESEH----------------IGPFNLGNPGEFTMLELAQVVKETIDPSA--RVEFKPN 349
Query: 420 NGDVP-FTHANVTHAAHDFGYRPTTSLDAGLRHFVDWFADYYKLKLD 465
D P +++ A + P SL GL V +D+ K +D
Sbjct: 350 TADDPHMRKPDISKAKSLLHWEPKISLKQGLPRMV---SDFQKRIMD 393
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 146/365 (40%), Gaps = 41/365 (11%)
Query: 113 EVRRSAKPRKDGGIAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQR 172
E+ + + RK G +VLVTG AG++GTH L L +G V +DNF+ L R R
Sbjct: 13 EMVGNGEGRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRV--R 70
Query: 173 LLAGRGVLV----LDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNV 228
L+AG + + D+ +EK+F + V+H A V ++ PQ Y +NV
Sbjct: 71 LIAGAALSARLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNV 130
Query: 229 AGLVTVLEVAAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAI 288
AG + + K+ + IV++SS++VYG P E+ + + Y TK +
Sbjct: 131 AGTMNLYSAMTKYGCKK--IVFSSSATVYGQPEKTPCVEDSKLS-ALNPYGTTKL---VL 184
Query: 289 AHTYNHIYG----LSITGLRFFTVYG----------PWGRPDMAYFFFAKSIVSGEP-IT 333
+ + + + + LR+F G P G P+ + + V P +
Sbjct: 185 ENYFRQVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELN 244
Query: 334 LFXX---XXXXXXXXXFTYIDDVVKGCLGALDXXXXXXXXXXXXXXXXPAPLRVYNLGNT 390
++ + ++ D+ G + AL+ YNLG
Sbjct: 245 VYGVDYPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCV----------AYNLGTG 294
Query: 391 SPVPVTRMVAILEKLLGKKANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPTTSLDAGLR 450
V +V E+ GKK +I GD +A+ A + G+ ++ R
Sbjct: 295 CGTTVLEVVKAFEEASGKKIPIKICPRRP-GDCTEVYASTDKAKKELGWSARFGIEDMCR 353
Query: 451 HFVDW 455
+W
Sbjct: 354 DQWNW 358
>Os01g0837300 UDP-glucuronic acid decarboxylase
Length = 410
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 42/335 (12%)
Query: 129 LVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVLVLDADIND 188
+VTG AGFVG+H L +GD V+ +DNF + L R L L D+ +
Sbjct: 104 VVTGGAGFVGSHLVDRLLEQGDSVIVVDNF---FTGRKDNVAHHLRNPRFEL-LRHDVVE 159
Query: 189 ALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADPQPAI 248
+LLE + HLA A + P + +NV G + +L +A +
Sbjct: 160 PILLE-------VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG---ARF 209
Query: 249 VWASSSSVYGLNTDAPFSEEHRTD-RPA---SLYAATKKAGEAIAHTYNHIYGLSITGLR 304
+ S+S VYG + P E + P S Y K+ E + Y+ G+ + R
Sbjct: 210 LLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVEVRIAR 269
Query: 305 FFTVYGPWGRPDMAYFF--FAKSIVSGEPITLFXXXXXXXXXXXFTYIDDVVKGCLGALD 362
F YGP D F + +P+T++ F Y+ D+V G + ++
Sbjct: 270 IFNTYGPRMCLDDGRVVSNFVAQALRRQPMTVY---GDGKQTRSFQYVSDLVAGLMALME 326
Query: 363 XXXXXXXXXXXXXXXXPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPSNGD 422
+ +NLGN + + ++++ + A I P+ D
Sbjct: 327 GDH----------------IGPFNLGNPGEFTMLELAQVVKETIDPMAT--IEFKPNTAD 368
Query: 423 VP-FTHANVTHAAHDFGYRPTTSLDAGLRHFVDWF 456
P ++T A H + P SL GL V F
Sbjct: 369 DPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDF 403
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 128 VLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVL-VLDADI 186
VLVTG AG++G+H +L L V +DN + + R QRL G L + AD+
Sbjct: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNL-SRGNMGAVRVLQRLFPEPGRLQFIYADL 147
Query: 187 NDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADPQP 246
DA + K+F F V+H AA A V + P Y + + +TVLE A +
Sbjct: 148 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYN--VK 205
Query: 247 AIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHTYNHIYGLSITGLRFF 306
++++S+ + YG P +E + P + Y KK E I ++ +++ LR+F
Sbjct: 206 TLIYSSTCATYGEPDTMPITEATPQN-PINPYGKAKKMAEDIILDFSKRSEMAVMILRYF 264
Query: 307 TVYG--PWGR 314
V G P GR
Sbjct: 265 NVIGSDPGGR 274
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,043,695
Number of extensions: 507561
Number of successful extensions: 1210
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1197
Number of HSP's successfully gapped: 14
Length of query: 498
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 393
Effective length of database: 11,553,331
Effective search space: 4540459083
Effective search space used: 4540459083
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)