BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0420000 Os09g0420000|Os09g0420000
(328 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0420000 Zinc finger, RING-type domain containing protein 584 e-167
Os09g0420100 Zinc finger, RING-type domain containing protein 347 8e-96
Os09g0419500 Zinc finger, RING-type domain containing protein 261 4e-70
Os09g0419600 Zinc finger, RING-type domain containing protein 255 3e-68
Os08g0451800 Zinc finger, RING-type domain containing protein 203 2e-52
Os08g0451900 Zinc finger, RING-type domain containing protein 164 8e-41
Os09g0283600 Zinc finger, RING-type domain containing protein 154 9e-38
Os09g0435200 121 7e-28
Os12g0631200 Zinc finger, RING-type domain containing protein 115 4e-26
Os09g0434900 Zinc finger, RING-type domain containing protein 102 3e-22
Os09g0559000 Zinc finger, RING-type domain containing protein 80 1e-15
Os04g0594000 RWD domain containing protein 78 7e-15
Os03g0626100 Zinc finger, RING-type domain containing protein 73 3e-13
Os11g0103400 Zinc finger, RING-type domain containing protein 68 1e-11
Os04g0492100 Similar to ARIADNE-like protein 66 3e-11
>Os09g0420000 Zinc finger, RING-type domain containing protein
Length = 328
Score = 584 bits (1505), Expect = e-167, Method: Compositional matrix adjust.
Identities = 290/328 (88%), Positives = 290/328 (88%)
Query: 1 MENSXXXXXXXXXXXXVIYISSDDEDEEIRILSADPYSPEEIQIQEVILLSLDYXXXXXX 60
MENS VIYISSDDEDEEIRILSADPYSPEEIQIQEVILLSLDY
Sbjct: 1 MENSAADAAAAAGGADVIYISSDDEDEEIRILSADPYSPEEIQIQEVILLSLDYSRAAAA 60
Query: 61 XXXXXXXXXXXXXXXXXXXXFGEPSSLPDRKGKSKLLSEDGPSESTTTRRWRKRGFTCII 120
FGEPSSLPDRKGKSKLLSEDGPSESTTTRRWRKRGFTCII
Sbjct: 61 DADTAQSSASSSRPSAAASTFGEPSSLPDRKGKSKLLSEDGPSESTTTRRWRKRGFTCII 120
Query: 121 CMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIGQCRDI 180
CMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIGQCRDI
Sbjct: 121 CMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIGQCRDI 180
Query: 181 VPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIAETECPHCHRMF 240
VPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIAETECPHCHRMF
Sbjct: 181 VPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIAETECPHCHRMF 240
Query: 241 CASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKSAGCTFM 300
CASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKSAGCTFM
Sbjct: 241 CASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKSAGCTFM 300
Query: 301 RCRCGFFFCYNCAAPMTKLVHYCKKCNR 328
RCRCGFFFCYNCAAPMTKLVHYCKKCNR
Sbjct: 301 RCRCGFFFCYNCAAPMTKLVHYCKKCNR 328
>Os09g0420100 Zinc finger, RING-type domain containing protein
Length = 292
Score = 347 bits (890), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 181/288 (62%), Positives = 213/288 (73%), Gaps = 8/288 (2%)
Query: 17 VIYISSDDEDEEIRILSADPYSPEEIQIQEVILLSLDYXXXXXXXXXXXXXXXXXXXXXX 76
+IY+SSDDE++E R+L A+ YS EEIQIQ+ ILLSLD
Sbjct: 12 LIYVSSDDEEDETRVLLAESYSAEEIQIQQAILLSLDPSSDADAAHSSASSSRPSGAAST 71
Query: 77 XXXXFGEPSSLPDRKGKSKLLS-EDGPSESTTTRRWRKRGFTCIICMDKVQASEEFLVNV 135
EPSSLPDRKGK KL S EDGP EST +R ++ F C +CM+K+Q SE+F V+
Sbjct: 72 S----DEPSSLPDRKGKRKLSSEEDGPIESTRKKRRKRGRFKCSVCMEKLQVSEQFTVSF 127
Query: 136 CSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIGQCRDIVPPELFGRWSVSLWE 195
C+HAFC SCIG YVAAK+S+NVA IGCPDPGCEEG VE+ CRDI+PPELF RWSVSL E
Sbjct: 128 CAHAFCNSCIGRYVAAKISENVAVIGCPDPGCEEGFVEMDTCRDIIPPELFDRWSVSLCE 187
Query: 196 SSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIAETECPHCHRMFCASCRVPWHDGIDCK 255
++GE K YCPFKDCSA+LINDN G ++I ETECPHCHRMFCA CRVPWHDGI CK
Sbjct: 188 LALGE-KKYYCPFKDCSALLINDN--DGAEKKIRETECPHCHRMFCARCRVPWHDGIKCK 244
Query: 256 EFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKSAGCTFMRCR 303
EFRKLG+DEKG+EDLM KKLAGKKKWQRCP C+M+V + GC ++CR
Sbjct: 245 EFRKLGDDEKGEEDLMFKKLAGKKKWQRCPNCKMFVSRIDGCLQIKCR 292
>Os09g0419500 Zinc finger, RING-type domain containing protein
Length = 317
Score = 261 bits (668), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 158/214 (73%), Gaps = 6/214 (2%)
Query: 118 CIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEE---GSVEI 174
C ICM+ V A E F + C+HAFC SC+ Y+AAKV +NV +IGCPDPGC++ G++
Sbjct: 105 CTICMETVDAIERFAIPGCTHAFCASCVRQYIAAKVEENVLSIGCPDPGCKDSGGGALHP 164
Query: 175 GQCRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIAETECP 234
CRD++PP+LF RW +L +S++ + K YCPF DCSA+L++D GDG E I + ECP
Sbjct: 165 EACRDVIPPQLFQRWGDALCDSAL-SSLKFYCPFSDCSALLVDDPGDG--EEAITDAECP 221
Query: 235 HCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKS 294
HC RMFCA C+VPWH G C EF+KLG DE+G++DL+L+K+A KWQRCP+C+MYVE+
Sbjct: 222 HCSRMFCAQCKVPWHGGATCAEFQKLGKDERGRDDLLLRKVAKDSKWQRCPKCKMYVERV 281
Query: 295 AGCTFMRCRCGFFFCYNCAAPMTKLVHYCKKCNR 328
GC F+ CRCG FCY CA+PM++ H+CKKC R
Sbjct: 282 EGCVFIICRCGHCFCYLCASPMSRDNHHCKKCKR 315
>Os09g0419600 Zinc finger, RING-type domain containing protein
Length = 221
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 116 FTCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIG 175
F C ICM+ V + +F V+ C HAFC CIG YVAAK+ +N A + CPDPGC G VE
Sbjct: 13 FYCSICMETVPGALKFSVSPCLHAFCVCCIGQYVAAKIGENTADVRCPDPGCG-GGVEPE 71
Query: 176 QCRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLIND-NGDGGDAEEIAETECP 234
CR +VP E+ RW + L E+++ + +CPF+DCS L+ D +G+GG +AE ECP
Sbjct: 72 SCRGVVPSEVLDRWGLLLCEAAI-VARRLHCPFRDCSEPLLADADGEGGG---VAEAECP 127
Query: 235 HCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKS 294
CHR+FCA C VPWHDG+ C+EF++LG DE+G+ED+M+++LAG+++WQRCPQCRMYVEKS
Sbjct: 128 SCHRLFCARCMVPWHDGVGCEEFQELGEDERGREDVMVRRLAGRERWQRCPQCRMYVEKS 187
Query: 295 AGCTFMRCRCGFFFCYNCAAPMTKLVHYCKKCNR 328
GC FM+CRCG+ FCY CA+PM+K +HYCK+C R
Sbjct: 188 EGCMFMKCRCGYCFCYACASPMSKELHYCKRCKR 221
>Os08g0451800 Zinc finger, RING-type domain containing protein
Length = 315
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 137/212 (64%), Gaps = 13/212 (6%)
Query: 102 PSESTTTRRWRKRGFTCIICMDKVQASEEFLVNV-CSHAFCKSCIGGYVAAKVSDNVAAI 160
P+ + TT + C ICMD V S + C HAFC +C+ GYV AK+ + +A +
Sbjct: 102 PAAAATTLVF------CKICMDAVPPSAAHRASRGCDHAFCAACLAGYVGAKIQERIADV 155
Query: 161 GCPDPGCEEGSVEIGQCRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNG 220
CP+ C G+++ C+ I+P E+F RW +L E+ + + YCPFKDCSAM+++D G
Sbjct: 156 RCPEERCR-GALDPELCQGILPREVFDRWGAALCEAMVLAAPRAYCPFKDCSAMMLDDAG 214
Query: 221 DGGDAEEIAETECPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKK 280
E + E+ECP C R+FCA C VPWH G+DC ++KLG ++GKEDL++ ++A KK
Sbjct: 215 -----EAVTESECPSCRRLFCAQCAVPWHAGVDCAAYKKLGKGDRGKEDLLVVEMAKGKK 269
Query: 281 WQRCPQCRMYVEKSAGCTFMRCRCGFFFCYNC 312
W+RCP+C+ +VEKS GC + CRCGF FCY C
Sbjct: 270 WKRCPKCKYFVEKSQGCLHITCRCGFEFCYGC 301
>Os08g0451900 Zinc finger, RING-type domain containing protein
Length = 228
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 117/194 (60%), Gaps = 6/194 (3%)
Query: 117 TCIICMDKVQASEEFLVNV--CSHAFCKSCIGGYVAAKV--SDNVAAIGCPDPGCEEGSV 172
+C ICM+ + SE C+HAFC++C+ G+V AKV A+ CPDP C G++
Sbjct: 29 SCGICMEPMPPSEAHRGGGGGCAHAFCRACLAGHVRAKVESGGGAGAVRCPDPSCG-GAL 87
Query: 173 EIGQCRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIAETE 232
+ CR +P ++F RW +L E+ + YCP+ CS M++ D D G A + ++E
Sbjct: 88 DPELCRGALPGDVFERWCAALCEAMFAGARRTYCPYPGCSEMMVADADDEGCAG-VTQSE 146
Query: 233 CPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVE 292
C C R+FCA C VPWH G+ C EF +LG E+G+EDL+L + A W+RCP+CR YVE
Sbjct: 147 CQACRRLFCARCGVPWHAGVSCAEFGRLGEGERGREDLLLVQAARNGGWKRCPRCRFYVE 206
Query: 293 KSAGCTFMRCRCGF 306
KS GC + CRC
Sbjct: 207 KSHGCLHITCRCAI 220
>Os09g0283600 Zinc finger, RING-type domain containing protein
Length = 331
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 102 PSESTTTRRWRKRGFTCIICMDKVQASEEFL-VNVCSHAFCKSCIGGYVAAKVSDNVAAI 160
PS +TT+ + C ICMD V AS+ + C+HAFC +C+ G++AAK+ +
Sbjct: 116 PSATTTSFLF------CKICMDDVPASDAHRGSHGCAHAFCAACLAGHIAAKLHSG-GGV 168
Query: 161 GCPDPGCEEGSVEIGQCRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNG 220
CP+ GC +V+ C+ I+P + F RW +L + + YCPF DC+ ++ ++ G
Sbjct: 169 YCPEDGCAS-AVDPELCQPILPEDNFERWCAALCRAMVLGGRHVYCPFTDCAEIIADERG 227
Query: 221 DGGDAEEIAETECPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKK 280
D + TECP C R FC C V WH G+ C E+ +L ++G+ DL + ++A +
Sbjct: 228 GDSDGQP---TECPACRRRFCERCGVAWHGGVSCGEYGELAVGDRGEGDLAVVEMAKGSR 284
Query: 281 WQRCPQCRMYVEKSAGCTFMRCRCGFFFCYNCA 313
W+RCP+C+ +V++ GC+ + CRCG FCY C
Sbjct: 285 WRRCPRCKFFVDRYEGCSHITCRCGLEFCYGCG 317
>Os09g0435200
Length = 887
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 116 FTCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGS---- 171
F C IC D + + F C H +C C+ Y+ KV + + CPDP C +G
Sbjct: 438 FDCGICFDTLPMLDLFRGLPCDHKYCLECMTTYIDGKVREGAVPVACPDPECADGGDGGA 497
Query: 172 --VEIGQCRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIA 229
+ C+ + F W + L E ++ + YCP + C +L+ +G+ E A
Sbjct: 498 GVLHPEGCKKAIDFAAFTDWGLRLAEGAVPHDRRAYCPNRRC-GILLETSGEA----EPA 552
Query: 230 ETECPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRM 289
CP C + CA+C W D + KG E M+KKLA +++W+ CP+CRM
Sbjct: 553 MAACPACQHLLCATCGGEWSTADDADHR----DCSKGPEAAMVKKLADERRWKACPKCRM 608
Query: 290 YVEKSAGCTFMRCRCGFFFCYNCAAPMTKLVHYCKKCN 327
VE++AGC M CRC FCY C + ++ +KC
Sbjct: 609 LVERTAGCRVMSCRCRMVFCYLCGLQIGAVLEGKEKCQ 646
>Os12g0631200 Zinc finger, RING-type domain containing protein
Length = 510
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 6/212 (2%)
Query: 117 TCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIGQ 176
TC IC ++ + ++ V C+H FC SC+ Y K+ N I CP C+ + +
Sbjct: 195 TCSICCEEKRGAQMIKVG-CAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKY-HISASE 252
Query: 177 CRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAML----INDNGDGGDAEEIAETE 232
C+ +P + + E+ + + YCPF +CS +L ++ E
Sbjct: 253 CKSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVE 312
Query: 233 CPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVE 292
CP CHR C +C VPWH + C E++ L DE+ DL L +LA +W+RC +CR +E
Sbjct: 313 CPECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAQNNRWRRCQRCRRMIE 372
Query: 293 KSAGCTFMRCRCGFFFCYNCAAPMTKLVHYCK 324
+ GC M C CG FCY+C A T + C+
Sbjct: 373 LTQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQ 404
>Os09g0434900 Zinc finger, RING-type domain containing protein
Length = 296
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 27/250 (10%)
Query: 84 PSSLPDRKGKSKLLSEDGPSESTTTRRWRKRGFTCIICMDKVQASEEFLV-NVCSHAFCK 142
PSS R G+ + L++D F C +CM+ + F V + C HAFC
Sbjct: 34 PSSSSSRAGRVRPLTDDEIGR-----------FYCEVCMEWKLVFDRFRVSDGCPHAFCV 82
Query: 143 SCIGGYVAAKVSDNVAAIGC----PDPGCEEGSVEIGQCRDIVPPELFGRWSVSLWESSM 198
+C+ G++ A+V+ + C G + +C+ ++ ++F RW V+L E ++
Sbjct: 83 ACVVGHIEARVAAGSVPVPCLLAGGGGCSGGGVMHPERCKKLLDIDVFDRWCVALCERAV 142
Query: 199 GETTKCYCPFKDCSAMLINDNGDGGDAEEI----AETECPHCHRMFCASCRVPWHDGIDC 254
G + CP++DC M + A + ++ CP C R FC C PW D
Sbjct: 143 G-PARARCPYRDCGEMAALEGEAAAAALPLRAAASKASCPTCSRAFCLQCEEPWDDR--- 198
Query: 255 KEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKSAGCTFMRCRCGFFFCYNCAA 314
G G L +LA ++W+RCP CR ++K GC M CRCG FCY+C +
Sbjct: 199 ---HGGGGGGDGGARCALTQLAKGREWRRCPSCRAMIDKIDGCKRMTCRCGTVFCYDCGS 255
Query: 315 PMTKLVHYCK 324
++ CK
Sbjct: 256 SFNPRMYSCK 265
>Os09g0559000 Zinc finger, RING-type domain containing protein
Length = 525
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 99/232 (42%), Gaps = 18/232 (7%)
Query: 91 KGKSKLLSEDGPSESTTTRRWRKRGFTCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVA 150
+ + LL DG R R+R TC IC D V + CSH +C SC GYV
Sbjct: 107 RDAAGLLPADGGGGEVPARVNRRR-LTCAICFD-VFDTGGMRSAGCSHFYCVSCWRGYVR 164
Query: 151 AKVSDNV--AAIGCPDPGCEEGSVE--IGQCRDIVPPELFGRWSV-SLWESSMGETTKCY 205
A V D ++ CPDP C V + D E FG +++ S E S G +
Sbjct: 165 AAVGDGARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMR---W 221
Query: 206 CPFKDCSAMLINDNGDGGDAEEIAETECPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEK 265
CP CS + + GGD EE +E C C C C H + CK K
Sbjct: 222 CPGPGCSRAV--EFVGGGDGEESSEVFCS-CGHGLCWRCGEEAHRPVSCKTVAKWVEKNS 278
Query: 266 GKEDLMLKKLAGKKKWQRCPQCRMYVEKSAGCTFMRCR--CGFFFCYNCAAP 315
+ + LA K CP+CR+ +EK+ GC M CR C FC+ C P
Sbjct: 279 SESETATWLLAHTKH---CPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKP 327
>Os04g0594000 RWD domain containing protein
Length = 492
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 34/259 (13%)
Query: 84 PSSLPDRKGKSKLLSEDG--PSESTTTRRWRKRGF-----TCIICMDKVQASEEFLVNVC 136
P D + S+ LS + PS + + + R + F C+IC+ + + S F+ C
Sbjct: 159 PMQKGDNRAISRSLSLESVIPSMLSYSSKKRYQAFLEDLHMCMICLSQSKGSN-FIRLPC 217
Query: 137 SHAFCKSCIGGYVAAKVSD-NVAAIGCPDPGCEEGSVEIGQCRDIVPPELFGRWSVSLWE 195
H FC C+G V + +V + CPD C S+ + ++ + F RW E
Sbjct: 218 QHLFCVKCLGTLCRMHVKEGSVFQLVCPDTKCN-ASIPPYVLKRLLTEDEFERWDRLTLE 276
Query: 196 SSMGETTKC-YCPFKDCSAMLINDNGDGGDAEEIAETECPHCHRMFCASCRVPWHDGIDC 254
++ + YCP C + D + +CP C FC+ C+ P H C
Sbjct: 277 KALDSMSDVVYCP--RCVIGCLEDEDNNA--------QCPKCSFFFCSFCKEPCHPRRQC 326
Query: 255 ----------KEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKSAGCTFMRC-R 303
+ ++ E +E L +K L + CP+CRM + K+AGC M C
Sbjct: 327 LTPEEKLQRRQASGRMSEREVAQEILNIKALYNDVRL--CPKCRMAISKTAGCNKMVCGN 384
Query: 304 CGFFFCYNCAAPMTKLVHY 322
CG FFC+ C + H+
Sbjct: 385 CGQFFCFRCGKAIKGYDHF 403
>Os03g0626100 Zinc finger, RING-type domain containing protein
Length = 570
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 86/219 (39%), Gaps = 13/219 (5%)
Query: 115 GFTCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGC----EEG 170
TC +C ++ ++ C H FC C Y AA VSD + C + C +E
Sbjct: 144 AVTCNVCFEEYPLGSVSAMD-CGHCFCNDCWTEYFAAAVSDGSKQMRCMEVKCTAICDEA 202
Query: 171 SVEIGQCRDIVPPELFGRWSVSLWESSMGETTKC-YCPFKDCSAMLINDNGDGGDAEEIA 229
V + P R L E+ + + +CP I +G GG E A
Sbjct: 203 VVRL--LLHGKHPGAAARLDRRLLEACVEASDAVRWCPSAPHCGRAIRVDGGGGGEERYA 260
Query: 230 ETECPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRM 289
E CP C +FC C H C + K G G E LK + K CP+C
Sbjct: 261 EVSCP-CGAVFCFRCGGGAHSPCPCPMWDKWGAMRGGGEVDNLKWIVANTK--SCPKCSK 317
Query: 290 YVEKSAGCTFMRCRCGFFFCYNCAAPMTKLVHYCKKCNR 328
+EK+ GC + C CG CY C A L Y CNR
Sbjct: 318 PIEKNGGCNHVTCTCGQHLCYACGAATGTL--YMHICNR 354
>Os11g0103400 Zinc finger, RING-type domain containing protein
Length = 551
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 117 TCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIGQ 176
C IC++ S+ V C+H FC SC+ +V K+ + CP GC + G
Sbjct: 298 NCTICLEDTDVSKIHAVEGCAHRFCFSCMKEHVKVKLLHGMLP-ACPQDGCTT-KLNCGG 355
Query: 177 CRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDNGDGGDAEEIAETECPHC 236
+D+ + + S+ ++ P ++ +++ D +A I + C
Sbjct: 356 FKDVPISTVITDHGAAYQGSTNSSNSQDLLPISQVLSLDVHERTDTSNARIILKMTCYDY 415
Query: 237 HRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVEKSAG 296
R + R+ ED L+ LA ++ W++C +C+ +E + G
Sbjct: 416 KRRY-RHARL---------------------EDAYLQNLAQQRLWRQCIRCKHMIELAEG 453
Query: 297 CTFMRCRCGFFFCYNC 312
C M C CG+ FCY C
Sbjct: 454 CYHMTCVCGYEFCYTC 469
>Os04g0492100 Similar to ARIADNE-like protein
Length = 464
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 20/212 (9%)
Query: 114 RGFTCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVA--AIGCPDPGCEE-- 169
R TC IC + + C H FC +C GY++ ++D + CPDP C
Sbjct: 5 RELTCGICFENCPRTS-MSAAACGHPFCSACWRGYISTSINDGPGCLMLRCPDPSCTAAV 63
Query: 170 GSVEIGQCRDIVPPELFGRWSVSLWESSMGETTKC-YCPFKDCSAMLINDNGDGGDAEEI 228
G I D E +GR+ L S + + K +CP C + G G
Sbjct: 64 GQDMINSLADDEDREKYGRY---LRRSYIEDNRKTKWCPAPGCEYAVEFVMGSGS----- 115
Query: 229 AETECPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCR 288
+ C +C FC +C H +DC K + + M LA K CP+C+
Sbjct: 116 YDVNC-NCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKP---CPKCK 171
Query: 289 MYVEKSAGCTFMRCR--CGFFFCYNCAAPMTK 318
+EK+ GC + C C F FC+ C P ++
Sbjct: 172 RPIEKNQGCMHITCTPPCKFEFCWLCLGPWSE 203
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,586,101
Number of extensions: 478150
Number of successful extensions: 1644
Number of sequences better than 1.0e-10: 22
Number of HSP's gapped: 1591
Number of HSP's successfully gapped: 22
Length of query: 328
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 227
Effective length of database: 11,762,187
Effective search space: 2670016449
Effective search space used: 2670016449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)