Os12g0631200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os12g0631200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.47 | 0.237 | 8.94 | 0.0266 | 0.629 | 0.305 | -0.0574 | -0.177 | 0.366 | 9.41 | 73 | 1231 | -- | -- |
| 25.5 | 0.235 | 8.94 | 0.0527 | 0.643 | 0.3 | -0.0293 | -- | 0.374 | 9.44 | 72.52 | 1188 | -- | -- |
| 25.45 | 0.235 | 8.94 | 0.0227 | 0.642 | 0.307 | -- | -0.18 | 0.366 | 9.44 | 72.88 | 1196 | -- | -- |
| 25.5 | 0.235 | 8.94 | 0.0519 | 0.645 | 0.305 | -- | -- | 0.374 | 9.44 | 72.53 | 1188 | -- | -- |
| 46.5 | 0.319 | 8.95 | 0.0938 | -- | 0.142 | -- | -0.0781 | 0.416 | -- | 72.88 | 1196 | -- | -- |
| 28.48 | 0.25 | 8.93 | 0.111 | 0.589 | -- | -0.0777 | -- | 0.411 | 9.06 | -- | -- | -- | -- |
| 28.51 | 0.25 | 8.93 | 0.109 | 0.59 | -- | -- | -- | 0.411 | 9.06 | -- | -- | -- | -- |
| 45.97 | 0.316 | 8.96 | 0.0637 | -- | 0.273 | -- | -- | 0.381 | -- | 74 | 1457 | -- | -- |
| 25.57 | 0.236 | 8.94 | -- | 0.647 | 0.312 | -- | -- | 0.367 | 9.44 | 72.21 | 1188 | -- | -- |
| 48.53 | 0.326 | 8.95 | 0.108 | -- | -- | -- | -- | 0.415 | -- | -- | -- | -- | -- |
| 28.82 | 0.251 | 8.93 | -- | 0.59 | -- | -- | -- | 0.399 | 9.04 | -- | -- | -- | -- |
| 46.07 | 0.316 | 8.95 | -- | -- | 0.277 | -- | -- | 0.376 | -- | 74 | 1457 | -- | -- |
| 48.83 | 0.326 | 8.95 | -- | -- | -- | -- | -- | 0.403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.68 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 16 |
| 5 | 23.79 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 17 | 24.07 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 23 | 24.11 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 35 | 24.24 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 49 | 24.29 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 60 | 24.38 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 63 | 24.40 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 67 | 24.42 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 15 | 13 |
| 76 | 24.44 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 80 | 24.47 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 97 | 24.50 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 143 | 24.66 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 157 | 24.69 | humidity | 70.0 | 90 | > th | dose independent | rect. | 12 | 16 |
| 159 | 24.69 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 184 | 24.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 188 | 24.77 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 197 | 24.79 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 211 | 24.81 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 240 | 24.87 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 248 | 24.89 | humidity | 60.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 254 | 24.90 | humidity | 80.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 263 | 24.92 | humidity | 60.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 281 | 24.95 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 285 | 24.95 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 290 | 24.97 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 315 | 25.00 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 331 | 25.02 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 344 | 25.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 365 | 25.06 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 13 |
| 428 | 25.14 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 8 |
| 453 | 25.17 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 455 | 25.17 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 17 |
| 463 | 25.18 | temperature | 30.0 | 90 | < th | dose independent | rect. | 11 | 17 |
| 476 | 25.19 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 11 | 17 |
| 497 | 25.21 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 498 | 25.21 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 519 | 25.23 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 527 | 25.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 529 | 25.24 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 536 | 25.25 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 595 | 25.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 604 | 25.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 9 |
| 605 | 25.31 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 614 | 25.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 9 |
| 628 | 25.32 | radiation | 1.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 640 | 25.33 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 652 | 25.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 663 | 25.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 678 | 25.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 679 | 25.37 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 15 |
| 686 | 25.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 692 | 25.37 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 702 | 25.38 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 704 | 25.38 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 711 | 25.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 712 | 25.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 715 | 25.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 716 | 25.39 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 719 | 25.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 720 | 25.39 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 722 | 25.39 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 727 | 25.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 728 | 25.39 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 736 | 25.39 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 743 | 25.40 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 745 | 25.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 5 |
| 752 | 25.40 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 755 | 25.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 763 | 25.41 | wind | 7.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 766 | 25.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 770 | 25.41 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 771 | 25.41 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 774 | 25.41 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 776 | 25.41 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 789 | 25.41 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 801 | 25.42 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 17 |
| 830 | 25.44 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 836 | 25.44 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 851 | 25.45 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
| 853 | 25.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 6 |
| 863 | 25.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 879 | 25.46 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 902 | 25.47 | humidity | 80.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 918 | 25.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 942 | 25.49 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 947 | 25.49 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 951 | 25.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 954 | 25.49 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 965 | 25.50 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 983 | 25.51 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 998 | 25.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 9 |
| 1000 | 25.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 15 |