BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0631200 Os12g0631200|AK101710
(510 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0631200 Zinc finger, RING-type domain containing protein 974 0.0
Os08g0451800 Zinc finger, RING-type domain containing protein 123 3e-28
Os09g0420000 Zinc finger, RING-type domain containing protein 115 1e-25
Os09g0419600 Zinc finger, RING-type domain containing protein 114 2e-25
Os09g0419500 Zinc finger, RING-type domain containing protein 110 3e-24
Os09g0283600 Zinc finger, RING-type domain containing protein 109 5e-24
Os11g0103400 Zinc finger, RING-type domain containing protein 108 7e-24
Os09g0420100 Zinc finger, RING-type domain containing protein 97 3e-20
Os08g0451900 Zinc finger, RING-type domain containing protein 93 4e-19
Os12g0102900 Zinc finger, RING-type domain containing protein 82 7e-16
Os09g0435200 75 1e-13
Os09g0434900 Zinc finger, RING-type domain containing protein 75 2e-13
>Os12g0631200 Zinc finger, RING-type domain containing protein
Length = 510
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/510 (95%), Positives = 485/510 (95%)
Query: 1 MEERLADVEGSFACNSRGEDDFRSCCGDEDEWEDTEESFTAGVAKGELDESSVRLFFKGV 60
MEERLADVEGSFACNSRGEDDFRSCCGDEDEWEDTEESFTAGVAKGELDESSVRLFFKGV
Sbjct: 1 MEERLADVEGSFACNSRGEDDFRSCCGDEDEWEDTEESFTAGVAKGELDESSVRLFFKGV 60
Query: 61 SSPEAEGKKLSGIGVVMERSPGVPMLQVQKKLDFYVDELVADHLALMDGLLVALQNGIRK 120
SSPEAEGKKLSGIGVVMERSPGVPMLQVQKKLDFYVDELVADHLALMDGLLVALQNGIRK
Sbjct: 61 SSPEAEGKKLSGIGVVMERSPGVPMLQVQKKLDFYVDELVADHLALMDGLLVALQNGIRK 120
Query: 121 IFAFTNSEKLYFQIAEAEILEDQLLVALGHRILELVEKLEDFDIILLPSFELERPLQLAK 180
IFAFTNSEKLYFQIAEAEILEDQLLVALGHRILELVEKLEDFDIILLPSFELERPLQLAK
Sbjct: 121 IFAFTNSEKLYFQIAEAEILEDQLLVALGHRILELVEKLEDFDIILLPSFELERPLQLAK 180
Query: 181 EAIGIMYLSPYEVGTCSICCEEKRGAQMIKVGCAHTFCYSCLTSYTQEKLQTNKVPIRCP 240
EAIGIMYLSPYEVGTCSICCEEKRGAQMIKVGCAHTFCYSCLTSYTQEKLQTNKVPIRCP
Sbjct: 181 EAIGIMYLSPYEVGTCSICCEEKRGAQMIKVGCAHTFCYSCLTSYTQEKLQTNKVPIRCP 240
Query: 241 QLRCKYHISASECKSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRA 300
QLRCKYHISASECKSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRA
Sbjct: 241 QLRCKYHISASECKSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRA 300
Query: 301 STSSQSDLNCVECPECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAXXXX 360
STSSQSDLNCVECPECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLA
Sbjct: 301 STSSQSDLNCVECPECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAQNNR 360
Query: 361 XXXXXXXXXMIELTQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQCVFWDXXXXXXXXXXX 420
MIELTQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQCVFWD
Sbjct: 361 WRRCQRCRRMIELTQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQCVFWDEESIEAASAAH 420
Query: 421 XTQASEIWAWDTFDCMPTAIEGYSEQERAQLALIQRFLSGGFNLGEPPSQSPPRCADSYI 480
TQASEIWAWDTFDCMPTAIEGYSEQERAQLALIQRFLSGGFNLGEPPSQSPPRCADSYI
Sbjct: 421 STQASEIWAWDTFDCMPTAIEGYSEQERAQLALIQRFLSGGFNLGEPPSQSPPRCADSYI 480
Query: 481 IDTMKDLHQLPWLERFVSVISDSYNEDYIQ 510
IDTMKDLHQLPWLERFVSVISDSYNEDYIQ
Sbjct: 481 IDTMKDLHQLPWLERFVSVISDSYNEDYIQ 510
>Os08g0451800 Zinc finger, RING-type domain containing protein
Length = 315
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 196 CSICCEE--KRGAQMIKVGCAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKYHISASEC 253
C IC + A GC H FC +CL Y K+Q +RCP+ RC+ + C
Sbjct: 112 CKICMDAVPPSAAHRASRGCDHAFCAACLAGYVGAKIQERIADVRCPEERCRGALDPELC 171
Query: 254 KSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVEC 313
+ LP +D A EA R YCPF +CS ++ A T S EC
Sbjct: 172 QGILPREVFDRWGAALCEAMVLAAPRAYCPFKDCSAMM--LDDAGEAVTES-------EC 222
Query: 314 PECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIEL 373
P C R C C VPWH + C Y+ L +R DL + +A +E
Sbjct: 223 PSCRRLFCAQCAVPWHAGVDCAAYKKLGKGDRGKEDLLVVEMAKGKKWKRCPKCKYFVEK 282
Query: 374 TQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQ 404
+QGC H+ C CG EFCY CG ++ +C
Sbjct: 283 SQGCLHITCRCGFEFCYGCGGQWGVTHASCS 313
>Os09g0420000 Zinc finger, RING-type domain containing protein
Length = 328
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 6/212 (2%)
Query: 195 TCSICCEEKRGAQMIKVG-CAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKY-HISASE 252
TC IC ++ + ++ V C+H FC SC+ Y K+ N I CP C+ + +
Sbjct: 117 TCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNVAAIGCPDPGCEEGSVEIGQ 176
Query: 253 CKSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVE 312
C+ +P + + E+ + + YCPF +CS +L ++ E
Sbjct: 177 CRDIVPPELFGRWSVSLWESSMGETTKCYCPFKDCSAMLINDN----GDGGDAEEIAETE 232
Query: 313 CPECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIE 372
CP CHR C +C VPWH + C E++ L DE+ DL L +LA +E
Sbjct: 233 CPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRCPQCRMYVE 292
Query: 373 LTQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQ 404
+ GC M C CG FCY+C A T + C+
Sbjct: 293 KSAGCTFMRCRCGFFFCYNCAAPMTKLVHYCK 324
>Os09g0419600 Zinc finger, RING-type domain containing protein
Length = 221
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Query: 196 CSICCEEKRGAQMIKVG-CAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKYHISASECK 254
CSIC E GA V C H FC C+ Y K+ N +RCP C + C+
Sbjct: 15 CSICMETVPGALKFSVSPCLHAFCVCCIGQYVAAKIGENTADVRCPDPGCGGGVEPESCR 74
Query: 255 SFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVECP 314
+P D EA R +CPF +CS L L+ +++ ECP
Sbjct: 75 GVVPSEVLDRWGLLLCEAAIV-ARRLHCPFRDCSEPL-LADADGEGGGVAEA-----ECP 127
Query: 315 ECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIELT 374
CHR C C VPWH +GC+E+Q L DER D+ + RLA +E +
Sbjct: 128 SCHRLFCARCMVPWHDGVGCEEFQELGEDERGREDVMVRRLAGRERWQRCPQCRMYVEKS 187
Query: 375 QGCFHMNCWCGHEFCYSCGAEYTNGIQTCQ 404
+GC M C CG+ FCY+C + + + C+
Sbjct: 188 EGCMFMKCRCGYCFCYACASPMSKELHYCK 217
>Os09g0419500 Zinc finger, RING-type domain containing protein
Length = 317
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 126/301 (41%), Gaps = 27/301 (8%)
Query: 122 FAFTNSEKLYFQIAEAEILEDQLLVALGHRILEL--VEKLEDFDIILLPSFELERPLQLA 179
A +++L + L Q++ + ++ V ++ D D++ +LE ++ +
Sbjct: 20 LALAIADELPQEAVAKPALMSQVMAGNSSMVAKMDEVSRVAD-DLMFAEDLQLEEVIRFS 78
Query: 180 KEAIGIMYL----------SPYEVGTCSICCEEKRGAQMIKV-GCAHTFCYSCLTSYTQE 228
+ G + ++ C+IC E + + GC H FC SC+ Y
Sbjct: 79 AHSAGPNCAVCGQATPSVDASWKPDYCTICMETVDAIERFAIPGCTHAFCASCVRQYIAA 138
Query: 229 KLQTNKVPIRCPQLRCK----YHISASECKSFLPVSCYDSLERAFAEAGTSDMERFYCPF 284
K++ N + I CP CK + C+ +P + A ++ S + +FYCPF
Sbjct: 139 KVEENVLSIGCPDPGCKDSGGGALHPEACRDVIPPQLFQRWGDALCDSALSSL-KFYCPF 197
Query: 285 PNCSVLL-DLSQHFSRASTSSQSDLNCVECPECHRDICINCGVPWHVMMGCDEYQSLPVD 343
+CS LL D A T + ECP C R C C VPWH C E+Q L D
Sbjct: 198 SDCSALLVDDPGDGEEAITDA-------ECPHCSRMFCAQCKVPWHGGATCAEFQKLGKD 250
Query: 344 ERDAGDLSLHRLAXXXXXXXXXXXXXMIELTQGCFHMNCWCGHEFCYSCGAEYTNGIQTC 403
ER DL L ++A +E +GC + C CGH FCY C + + C
Sbjct: 251 ERGRDDLLLRKVAKDSKWQRCPKCKMYVERVEGCVFIICRCGHCFCYLCASPMSRDNHHC 310
Query: 404 Q 404
+
Sbjct: 311 K 311
>Os09g0283600 Zinc finger, RING-type domain containing protein
Length = 331
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 196 CSICCEE--KRGAQMIKVGCAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKYHISASEC 253
C IC ++ A GCAH FC +CL + KL + + CP+ C + C
Sbjct: 126 CKICMDDVPASDAHRGSHGCAHAFCAACLAGHIAAKLHSGG-GVYCPEDGCASAVDPELC 184
Query: 254 KSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVEC 313
+ LP ++ A A YCPF +C+ ++ + SD EC
Sbjct: 185 QPILPEDNFERWCAALCRAMVLGGRHVYCPFTDCAEIIADER-------GGDSDGQPTEC 237
Query: 314 PECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIEL 373
P C R C CGV WH + C EY L V +R GDL++ +A ++
Sbjct: 238 PACRRRFCERCGVAWHGGVSCGEYGELAVGDRGEGDLAVVEMAKGSRWRRCPRCKFFVDR 297
Query: 374 TQGCFHMNCWCGHEFCYSCGAEYT-NGIQTCQ 404
+GC H+ C CG EFCY CG E+ G +CQ
Sbjct: 298 YEGCSHITCRCGLEFCYGCGQEWGPTGHSSCQ 329
>Os11g0103400 Zinc finger, RING-type domain containing protein
Length = 551
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 174/403 (43%), Gaps = 57/403 (14%)
Query: 29 EDEWEDTEESFTAGVAKGELDESSVRLFFKGVSSPEAEGKKLS--GIGVVMER---SPGV 83
ED+W + F + E + R+ FKG++S E G + G+GV+ G
Sbjct: 119 EDKWAHDGDYFERPLPL-EGGGALFRVLFKGMASREVVGPRDRDPGVGVLAVAICGPRGE 177
Query: 84 PMLQVQKKLDFYVDE--LVADHLALMDGLLVALQNGIRKIFAFTNSEKLYFQIAEAEILE 141
+L++ K + + ++ + +AL++GL AL GIR + T+++ L+ ++
Sbjct: 178 VVLRIHKPVQAQAQQGRMMLEAMALVEGLNAALALGIRTLNVLTDNKPLHNHMSGIWRPR 237
Query: 142 DQLLVALGHRILELVEKLEDFDIILLPSFELERPLQLAKEAI-------GIMYLSPYEVG 194
+ LV L + +K E +I+ + ++ +LA +++ ++ +
Sbjct: 238 QKRLVDLINEAFSAKQKFEQSEILCVARTQVNYVTKLATDSLHTQIAKAAVVSAGKEKKE 297
Query: 195 TCSICCEEKRGAQMIKV-GCAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKYHISASEC 253
C+IC E+ +++ V GCAH FC+SC+ + + KL +P CPQ C ++ C
Sbjct: 298 NCTICLEDTDVSKIHAVEGCAHRFCFSCMKEHVKVKLLHGMLPA-CPQDGCTTKLN---C 353
Query: 254 KSF--LPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFS-----RASTSSQS 306
F +P+S + A + T+ N LL +SQ S R TS+
Sbjct: 354 GGFKDVPISTVITDHGAAYQGSTNS--------SNSQDLLPISQVLSLDVHERTDTSNAR 405
Query: 307 DLNCVECPECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXX 366
+ + M C +Y+ R D L LA
Sbjct: 406 II---------------------LKMTCYDYKRRYRHAR-LEDAYLQNLAQQRLWRQCIR 443
Query: 367 XXXMIELTQGCFHMNCWCGHEFCYSCGAEYTNGIQTCQCVFWD 409
MIEL +GC+HM C CG+EFCY+CG E+ TC C WD
Sbjct: 444 CKHMIELAEGCYHMTCVCGYEFCYTCGKEWKEKKATCSCPLWD 486
>Os09g0420100 Zinc finger, RING-type domain containing protein
Length = 292
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 196 CSICCEEKRGAQMIKVG-CAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKY-HISASEC 253
CS+C E+ + ++ V CAH FC SC+ Y K+ N I CP C+ + C
Sbjct: 110 CSVCMEKLQVSEQFTVSFCAHAFCNSCIGRYVAAKISENVAVIGCPDPGCEEGFVEMDTC 169
Query: 254 KSFLPVSCYDSLERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVEC 313
+ +P +D + E + +++YCPF +CS LL + ++ + EC
Sbjct: 170 RDIIPPELFDRWSVSLCELALGE-KKYYCPFKDCSALL------INDNDGAEKKIRETEC 222
Query: 314 PECHRDICINCGVPWHVMMGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIEL 373
P CHR C C VPWH + C E++ L DE+ DL +LA +
Sbjct: 223 PHCHRMFCARCRVPWHDGIKCKEFRKLGDDEKGEEDLMFKKLAGKKKWQRCPNCKMFVSR 282
Query: 374 TQGCFHMNC 382
GC + C
Sbjct: 283 IDGCLQIKC 291
>Os08g0451900 Zinc finger, RING-type domain containing protein
Length = 228
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 212 GCAHTFCYSCLTSYTQEKLQTN--KVPIRCPQLRCKYHISASECKSFLPVSCYDSLERAF 269
GCAH FC +CL + + K+++ +RCP C + C+ LP ++ A
Sbjct: 49 GCAHAFCRACLAGHVRAKVESGGGAGAVRCPDPSCGGALDPELCRGALPGDVFERWCAAL 108
Query: 270 AEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVECPECHRDICINCGVPWH 329
EA + R YCP+P CS ++ + +QS EC C R C CGVPWH
Sbjct: 109 CEAMFAGARRTYCPYPGCSEMMVADADDEGCAGVTQS-----ECQACRRLFCARCGVPWH 163
Query: 330 VMMGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIELTQGCFHMNCWC 384
+ C E+ L ER DL L + A +E + GC H+ C C
Sbjct: 164 AGVSCAEFGRLGEGERGREDLLLVQAARNGGWKRCPRCRFYVEKSHGCLHITCRC 218
>Os12g0102900 Zinc finger, RING-type domain containing protein
Length = 515
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 153/378 (40%), Gaps = 80/378 (21%)
Query: 54 RLFFKGVSSPEAEGKKLS--GIGVVMER---SPGVPMLQVQKKLDFYVDE--LVADHLAL 106
R+ FKG++S E G + G+GV+ G +L++ K + + ++ + +AL
Sbjct: 131 RVLFKGMASREVVGPRDRDPGVGVLAVAICGPRGEVVLRIHKPVQAQAQQGRMMLEAMAL 190
Query: 107 MDGLLVALQNGIRKIFAFTNSEKLYFQIAEAEILEDQLLVALGHRILELVEKLEDFDIIL 166
++GL AL GIR + T+++ L+ ++ + LV L + +K E +I+
Sbjct: 191 VEGLNAALALGIRTLNVLTDNKPLHNHMSGIWRPRQKRLVDLINEAFSTKQKFEQCEILC 250
Query: 167 LPSFELERPLQLAKEAIGIMYLSPYEVG-------TCSICCEEKRGAQMIKV-GCAHTFC 218
+ ++ +LA +++ V C+IC E+ +++ V GCAH FC
Sbjct: 251 VARTQVNYVTKLATDSLHTQIAKAAAVSAGKEKKENCTICLEDTDVSKIHAVEGCAHRFC 310
Query: 219 YSCLTSYTQEKLQTNKVPIRCPQLRCKYHISASECKSF--LPVSCYDSLERAFAEAGTSD 276
+SC+ + KL +P CPQ C ++ C F +P+S S A + T+
Sbjct: 311 FSCMKERVKVKLLHGMLPA-CPQDGCTTKLN---CGGFKDVPISTVISDHGAAYQGSTNS 366
Query: 277 MERFYCPFPNCSVLLDLSQHFS-----RASTSSQSDLNCVECPECHRDICINCGVPWHVM 331
N LL +SQ FS R TS+ S + +
Sbjct: 367 --------SNSQDLLPISQVFSLDVHERTDTSNASII---------------------LK 397
Query: 332 MGCDEYQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIELTQGCFHMNCWCGHEFCYS 391
M C +Y+ R D L LA CG+EFCY+
Sbjct: 398 MTCYDYKRRYPHAR-LEDAYLQNLARQR------------------------CGYEFCYT 432
Query: 392 CGAEYTNGIQTCQCVFWD 409
CG E+ TC C WD
Sbjct: 433 CGKEWKEKKATCSCPLWD 450
>Os09g0435200
Length = 887
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 79/211 (37%), Gaps = 37/211 (17%)
Query: 213 CAHTFCYSCLTSYTQEKLQTNKVPIRCPQLRCKYH-------ISASECKSFLPVSCYDSL 265
C H +C C+T+Y K++ VP+ CP C + CK + + +
Sbjct: 458 CDHKYCLECMTTYIDGKVREGAVPVACPDPECADGGDGGAGVLHPEGCKKAIDFAAFTDW 517
Query: 266 ERAFAEAGTSDMERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVECPECHRDICINCG 325
AE R YCP C +LL+ TS +++ CP C +C CG
Sbjct: 518 GLRLAEGAVPHDRRAYCPNRRCGILLE---------TSGEAEPAMAACPACQHLLCATCG 568
Query: 326 VPWHVMMGCDEYQSLPVDERDAGDLS-------LHRLAXXXXXXXXXXXXXMIELTQGCF 378
W D+ D D S + +LA ++E T GC
Sbjct: 569 GEWST-----------ADDADHRDCSKGPEAAMVKKLADERRWKACPKCRMLVERTAGCR 617
Query: 379 HMNCWCGHEFCYSCGAEYT---NGIQTCQCV 406
M+C C FCY CG + G + CQC+
Sbjct: 618 VMSCRCRMVFCYLCGLQIGAVLEGKEKCQCL 648
>Os09g0434900 Zinc finger, RING-type domain containing protein
Length = 296
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 96/250 (38%), Gaps = 16/250 (6%)
Query: 166 LLPSFELERPLQLAKEAIGIMYLSPYEVGT--CSICCEEKRGAQMIKV--GCAHTFCYSC 221
L+ L+ P + A + L+ E+G C +C E K +V GC H FC +C
Sbjct: 25 LIRGSMLDPPSSSSSRAGRVRPLTDDEIGRFYCEVCMEWKLVFDRFRVSDGCPHAFCVAC 84
Query: 222 LTSYTQEKLQTNKVPIRC-----PQLRCKYHISASECKSFLPVSCYDSLERAFAEAGTSD 276
+ + + ++ VP+ C + CK L + +D A E
Sbjct: 85 VVGHIEARVAAGSVPVPCLLAGGGGCSGGGVMHPERCKKLLDIDVFDRWCVALCERAVGP 144
Query: 277 MERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVECPECHRDICINCGVPWHVMMGCDE 336
R CP+ +C + L + A+ ++ + CP C R C+ C PW D+
Sbjct: 145 A-RARCPYRDCGEMAALEGEAAAAALPLRAAASKASCPTCSRAFCLQCEEPW------DD 197
Query: 337 YQSLPVDERDAGDLSLHRLAXXXXXXXXXXXXXMIELTQGCFHMNCWCGHEFCYSCGAEY 396
+L +LA MI+ GC M C CG FCY CG+ +
Sbjct: 198 RHGGGGGGDGGARCALTQLAKGREWRRCPSCRAMIDKIDGCKRMTCRCGTVFCYDCGSSF 257
Query: 397 TNGIQTCQCV 406
+ +C+C
Sbjct: 258 NPRMYSCKCT 267
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,015,418
Number of extensions: 692292
Number of successful extensions: 1902
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1867
Number of HSP's successfully gapped: 13
Length of query: 510
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 405
Effective length of database: 11,553,331
Effective search space: 4679099055
Effective search space used: 4679099055
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)