Os04g0594000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RWD domain containing protein.
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Os04g0594000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RWD domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.44 | 0.478 | 6.72 | 1.81 | 1.1 | 0.557 | -0.257 | -1.77 | 0.0997 | 20.7 | 82 | 1351 | -- | -- |
| 106.36 | 0.48 | 6.72 | 1.73 | 1.06 | 0.55 | -0.212 | -- | 0.0898 | 20.6 | 83.99 | 1414 | -- | -- |
| 103.64 | 0.474 | 6.72 | 1.82 | 1.09 | 0.57 | -- | -1.79 | 0.101 | 20.7 | 82.11 | 1368 | -- | -- |
| 106.39 | 0.48 | 6.72 | 1.69 | 1.09 | 0.491 | -- | -- | 0.0707 | 20.7 | 83 | 1414 | -- | -- |
| 169.61 | 0.607 | 6.69 | 1.81 | -- | 0.693 | -- | -1.98 | 0.101 | -- | 83.15 | 1432 | -- | -- |
| 109.52 | 0.491 | 6.72 | 1.69 | 1.1 | -- | -0.319 | -- | 0.0499 | 20.6 | -- | -- | -- | -- |
| 109.84 | 0.491 | 6.72 | 1.7 | 1.1 | -- | -- | -- | 0.0495 | 20.7 | -- | -- | -- | -- |
| 173.63 | 0.614 | 6.69 | 1.67 | -- | 0.593 | -- | -- | 0.0765 | -- | 83 | 1435 | -- | -- |
| 176.95 | 0.62 | 6.75 | -- | 1.1 | 0.683 | -- | -- | 0.0141 | 20.8 | 87.99 | 1481 | -- | -- |
| 178.52 | 0.624 | 6.69 | 1.69 | -- | -- | -- | -- | 0.04 | -- | -- | -- | -- | -- |
| 185.77 | 0.638 | 6.77 | -- | 1.1 | -- | -- | -- | -0.14 | 20.8 | -- | -- | -- | -- |
| 243.07 | 0.726 | 6.71 | -- | -- | 0.821 | -- | -- | -0.0459 | -- | 87.82 | 1476 | -- | -- |
| 254.26 | 0.744 | 6.74 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.37 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 6 |
| 3 | 91.48 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 6 | 92.34 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 9 | 92.83 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 11 | 93.17 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 30 | 94.17 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 38 | 94.52 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 93 | 96.13 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 109 | 96.49 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 19 |
| 129 | 97.07 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 130 | 97.10 | humidity | 90.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 138 | 97.19 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 17 |
| 144 | 97.26 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 152 | 97.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 153 | 97.37 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 160 | 97.44 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 161 | 97.44 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 17 |
| 165 | 97.53 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 174 | 97.61 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 203 | 97.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 206 | 97.90 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 2 | 6 |
| 215 | 97.98 | wind | 5.0 | 30 | < th | dose independent | rect. | 3 | 5 |
| 227 | 98.05 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 234 | 98.09 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 237 | 98.12 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 5 |
| 239 | 98.12 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 240 | 98.13 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 246 | 98.16 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 17 |
| 252 | 98.19 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 7 |
| 255 | 98.19 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 258 | 98.21 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 263 | 98.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 265 | 98.26 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 266 | 98.26 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 269 | 98.26 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 271 | 98.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 272 | 98.26 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 288 | 98.30 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 7 |
| 290 | 98.30 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 291 | 98.30 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 7 |
| 294 | 98.30 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 295 | 98.30 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 17 |
| 302 | 98.32 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 312 | 98.38 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 19 |
| 315 | 98.38 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 19 |
| 319 | 98.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 321 | 98.44 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 322 | 98.45 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 323 | 98.45 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 326 | 98.45 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 328 | 98.45 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 329 | 98.45 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 339 | 98.45 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 345 | 98.47 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 348 | 98.49 | radiation | 40.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 353 | 98.52 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 359 | 98.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 363 | 98.56 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 3 |
| 390 | 98.61 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 391 | 98.61 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 17 |
| 395 | 98.61 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 17 |
| 454 | 98.81 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 17 |
| 514 | 98.98 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 551 | 99.05 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 566 | 99.10 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 571 | 99.12 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 586 | 99.14 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 6 |
| 611 | 99.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 613 | 99.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 671 | 99.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 674 | 99.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 678 | 99.37 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 680 | 99.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 686 | 99.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 687 | 99.37 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 736 | 99.53 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 744 | 99.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 745 | 99.55 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 754 | 99.57 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 778 | 99.63 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 785 | 99.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 23 |
| 789 | 99.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 790 | 99.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 802 | 99.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 816 | 99.70 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 18 |
| 828 | 99.72 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 841 | 99.75 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 844 | 99.75 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 846 | 99.75 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 18 |
| 851 | 99.75 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 890 | 99.81 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 900 | 99.81 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 908 | 99.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 909 | 99.83 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 918 | 99.85 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 922 | 99.86 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 948 | 99.90 | wind | 5.0 | 30 | < th | dose independent | rect. | 17 | 10 |
| 953 | 99.91 | humidity | 90.0 | 30 | < th | dose independent | rect. | 16 | 16 |
| 959 | 99.92 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 985 | 99.96 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 16 |
| 988 | 99.96 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 991 | 99.97 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 8 |