BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0401200 Os09g0401200|AK063980
(317 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0401200 Similar to HSP associated protein like 645 0.0
Os02g0100300 Similar to HSP associated protein like 254 5e-68
U92541 119 3e-27
Os07g0186000 Similar to Thioredoxin h isoform 1 119 3e-27
Os05g0508500 Similar to Thioredoxin H 116 3e-26
Os03g0800700 Similar to Thioredoxin H-type 5 (TRX-H-5) 110 2e-24
Os07g0190800 Similar to Thioredoxin h 106 2e-23
Os01g0168200 Similar to Thioredoxin-like protein 105 4e-23
Os05g0169000 Similar to Thioredoxin-like protein 105 6e-23
AK110198 97 2e-20
Os05g0480200 Thioredoxin domain 2 containing protein 85 6e-17
Os01g0218200 Thioredoxin domain 2 containing protein 79 3e-15
Os12g0281300 Similar to Pi-ta protein 77 2e-14
Os05g0204900 Similar to Type 5 protein serine/threonine pho... 68 1e-11
>Os09g0401200 Similar to HSP associated protein like
Length = 317
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MATAGASSFEDEIMESDIELEGEAVEPDNDPPQKMGDPSVEVSDEKRDQAQLCKNKGVDA 60
MATAGASSFEDEIMESDIELEGEAVEPDNDPPQKMGDPSVEVSDEKRDQAQLCKNKGVDA
Sbjct: 1 MATAGASSFEDEIMESDIELEGEAVEPDNDPPQKMGDPSVEVSDEKRDQAQLCKNKGVDA 60
Query: 61 FSEGKLDEAIEHLTEAIVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKG 120
FSEGKLDEAIEHLTEAIVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKG
Sbjct: 61 FSEGKLDEAIEHLTEAIVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKG 120
Query: 121 YKSRGMAKAMLGKWEEAAQDLRMAAKLDYDEEIGAELKKVEPNVLKIEEHRKKYERLRKE 180
YKSRGMAKAMLGKWEEAAQDLRMAAKLDYDEEIGAELKKVEPNVLKIEEHRKKYERLRKE
Sbjct: 121 YKSRGMAKAMLGKWEEAAQDLRMAAKLDYDEEIGAELKKVEPNVLKIEEHRKKYERLRKE 180
Query: 181 RDIKKAEMEKQRKHAEEVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAA 240
RDIKKAEMEKQRKHAEEVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAA
Sbjct: 181 RDIKKAEMEKQRKHAEEVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAA 240
Query: 241 WCGPCRFIGPVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVV 300
WCGPCRFIGPVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVV
Sbjct: 241 WCGPCRFIGPVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVV 300
Query: 301 GADKNGLERKVAQHGSS 317
GADKNGLERKVAQHGSS
Sbjct: 301 GADKNGLERKVAQHGSS 317
>Os02g0100300 Similar to HSP associated protein like
Length = 408
Score = 254 bits (650), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/200 (64%), Positives = 161/200 (80%), Gaps = 1/200 (0%)
Query: 2 ATAGASSFEDEIMESDIELEGEAVEPDN-DPPQKMGDPSVEVSDEKRDQAQLCKNKGVDA 60
AT + +I+ESD+ELEG+ VE D+ DPPQKMGDPS++V++E RD +Q K+K ++A
Sbjct: 79 ATPEPDELDQDIVESDLELEGDIVESDHQDPPQKMGDPSIDVTEENRDASQEAKSKAMEA 138
Query: 61 FSEGKLDEAIEHLTEAIVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKG 120
SEGKL+EAI+HLT+AI+LNP SAI Y TRA +F+K KKP AAIRDA+AAL+INPDSAKG
Sbjct: 139 MSEGKLEEAIDHLTKAILLNPLSAIMYGTRASVFIKMKKPVAAIRDANAALEINPDSAKG 198
Query: 121 YKSRGMAKAMLGKWEEAAQDLRMAAKLDYDEEIGAELKKVEPNVLKIEEHRKKYERLRKE 180
YK+RGMA AMLGKWEEAA DL A+ +DYD+EI A LKKVEPN KI EHR+KYERLRKE
Sbjct: 199 YKTRGMAYAMLGKWEEAAHDLHTASNMDYDDEINAVLKKVEPNAHKIMEHRRKYERLRKE 258
Query: 181 RDIKKAEMEKQRKHAEEVSA 200
R+ K+AE ++ + AE +A
Sbjct: 259 REEKRAERDRFHRRAEAQAA 278
>U92541
Length = 122
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 204 ALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVV 263
A ++G VIA H+ E D ++ A ++V++ FTA+WCGPCRFI PV A+K V
Sbjct: 2 AAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV 61
Query: 264 FLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQH 314
FLKVD+DEL VA ++NV ++P+F F+++G E DKVVGA K+ L+ + +H
Sbjct: 62 FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
>Os07g0186000 Similar to Thioredoxin h isoform 1
Length = 122
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 204 ALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVV 263
A ++G VIA H+ E D ++ A ++V++ FTA+WCGPCRFI PV A+K V
Sbjct: 2 AAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV 61
Query: 264 FLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQH 314
FLKVD+DEL VA ++NV ++P+F F+++G E DKVVGA K+ L+ + +H
Sbjct: 62 FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
>Os05g0508500 Similar to Thioredoxin H
Length = 121
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%)
Query: 207 DGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLK 266
+G VIAIHS E +++ A+S +LVV+ FTA+WCGPCR I PV LA+KH N VFLK
Sbjct: 11 EGTVIAIHSLDEWTIQIEEANSAKKLVVIDFTASWCGPCRIIAPVFADLAKKHTNAVFLK 70
Query: 267 VDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQH 314
VD+DEL +A +++V ++P+F F++ G D+VVGA K+ L K+ H
Sbjct: 71 VDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAMKDELASKLELH 118
>Os03g0800700 Similar to Thioredoxin H-type 5 (TRX-H-5)
Length = 134
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Query: 207 DGDVIAIHSSSELDTKLKA-ASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFL 265
D V+A+HS++ D + A S+ ++L+V+ F+A WCGPCRFI P K +A + + VF
Sbjct: 20 DSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCGPCRFIEPAFKDMAGRFADAVFF 79
Query: 266 KVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQHGSS 317
K+D+DEL+ VA +W V ++P+F ++ GKE+ +VVGA K+ LERKV SS
Sbjct: 80 KIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAKKDELERKVNMFISS 131
>Os07g0190800 Similar to Thioredoxin h
Length = 138
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 71/102 (69%)
Query: 210 VIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKVDI 269
V+A+HS ++ D A + ++LVV+ F+A+WCGPC+ + PV K +A + +V FLKVD+
Sbjct: 23 VVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFLKVDV 82
Query: 270 DELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKV 311
DEL VA W V ++P+F R G+E+ ++VGADK+ LE+ +
Sbjct: 83 DELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTI 124
>Os01g0168200 Similar to Thioredoxin-like protein
Length = 131
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 72/108 (66%)
Query: 205 LKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVF 264
K G+V I + D K+ A+ ++V+ F+AAWCGPCR I PV +++ + +F
Sbjct: 18 FKGGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYAEMSQTYPQFMF 77
Query: 265 LKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVA 312
L +D+DEL + W++ + P+FFF++NG+++DK+VGA+K LE+KVA
Sbjct: 78 LTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGANKPELEKKVA 125
>Os05g0169000 Similar to Thioredoxin-like protein
Length = 132
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Query: 190 KQRKHAEEVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIG 249
K R+H EE K G+V I S + D K++ A+ ++VV F+A+WCGPCR I
Sbjct: 7 KGRRHIEE---DKLDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGPCRVIA 63
Query: 250 PVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLER 309
P+ +++ + ++FL +D+D+L + W++ + P+FFF++N K++DK+VGA+K LE+
Sbjct: 64 PIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGANKPELEK 123
Query: 310 KV 311
KV
Sbjct: 124 KV 125
>AK110198
Length = 961
Score = 96.7 bits (239), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 215 SSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKVDIDELNS 274
S++E D +L+AA S +LVV+ F A WCGPC+ I PV + L +H NV FLKVD+D + +
Sbjct: 7 SATEFDAELQAAGS--KLVVVDFHALWCGPCKVIAPVFQQLVTRHPNVTFLKVDVDRVQA 64
Query: 275 VAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQH 314
VA R+ V ++P+F F++N +D + GAD N L V QH
Sbjct: 65 VAQRYRVRAMPTFLFLKNKNVVDTLQGADPNRLTALVKQH 104
>Os05g0480200 Thioredoxin domain 2 containing protein
Length = 135
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 63/106 (59%)
Query: 208 GDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKV 267
G+V + D ++ + + VVL F+A WC PCR P+ L+ K+ ++VF+ V
Sbjct: 20 GNVTLVTDQKNWDNTMEEVAEHGKTVVLKFSAIWCTPCRNAAPLFAELSLKYPDIVFVSV 79
Query: 268 DIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQ 313
D+DE+ + +++V + P+F F++N +EIDK+VG + L+ K Q
Sbjct: 80 DVDEMPELVTQYDVRATPTFIFMKNNEEIDKLVGGNHEDLQEKFEQ 125
>Os01g0218200 Thioredoxin domain 2 containing protein
Length = 672
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 54 KNKGVDAFSEGKLDEAIEHLTEAIVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKI 113
++ G + F+ GK EA E + +P + + Y RA K + +I D + ALKI
Sbjct: 442 RSLGNELFNSGKFSEACLAYGEGLKHHPVNPVLYCNRAACRFKLGQWEKSIEDCNEALKI 501
Query: 114 NPDSAKGYKSRGMAKAMLGKWEEAAQDLRMAAKLDYDEEIGAELKKVEPNVLKIEEHRKK 173
P+ K R + + +W E+ +D + L+K P ++ E
Sbjct: 502 QPNYPKALLRRAASYGKMERWAESVKDYEV-------------LRKELPGDTEVAE---- 544
Query: 174 YERLRKERDIKKAEMEKQRKHAEEVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLV 233
A++ + EEVS G+V AI + + A+SL +
Sbjct: 545 --------AYFHAQVALKSSRGEEVSNMKFG---GEVEAITGMEQF----QMATSLPGVS 589
Query: 234 VLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNG 293
V++F C I P +L ++ ++ FLKVDI E +VA NV +VP+F +NG
Sbjct: 590 VIHFMTPLNQQCCKISPFVNTLCTRYPSISFLKVDISESPAVARAENVRTVPTFKIYKNG 649
Query: 294 KEIDKVVGADKNGLERKVAQHG 315
+ +++ LE V +G
Sbjct: 650 TRVKEMICPSLQLLEYSVRHYG 671
>Os12g0281300 Similar to Pi-ta protein
Length = 1033
Score = 76.6 bits (187), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 207 DGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLK 266
+G VI H+ + + A +LVV+ FT + C R+I P A++ VF+K
Sbjct: 915 EGTVIVPHTMEQFALHMSQAKQSHKLVVIQFTTSRCPASRYIAPAFTEYAKEFAGAVFIK 974
Query: 267 VDI--DELNSVAYRWNVSS-VPSFFFVRNGKEIDKVVGADKNGLERKVAQHGSS 317
V++ DEL SV +++ VP+FFFV++G++IDK+ GA+K L K+ +H +S
Sbjct: 975 VNVDSDELESVTDWYDIEGIVPTFFFVKDGEKIDKIPGANKELLRAKIRRHTAS 1028
>Os05g0204900 Similar to Type 5 protein serine/threonine phosphatase 62 kDa
isoform
Length = 483
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 86/159 (54%), Gaps = 20/159 (12%)
Query: 37 DPSVEVSDEKRDQAQLCKNKGVDAFSEGKLDEAIEHLTEAIVLNPTSAIAYATRAVIFVK 96
D + ++++K ++ +L N DAF K AIE ++AI LN ++A+ +A RA K
Sbjct: 2 DANSSLNEQKSEELKLKAN---DAFKANKFSLAIELYSQAIELNSSNAVYWANRAFAHTK 58
Query: 97 SKKPNAAIRDADAALKINPDSAKGYKSRGMAKAMLGKWEEAAQDLRMAAKLDYDEEIGAE 156
++ +A++DA A++I+ +KGY RG A +GK++EA +D + +
Sbjct: 59 LEEYGSAVQDASKAIEIDARYSKGYYRRGAAYLAMGKFKEALKDFQ-------------Q 105
Query: 157 LKKVEPN----VLKIEEHRKKYERLRKERDIKKAEMEKQ 191
+K++ PN K++E K +++R E I + EK+
Sbjct: 106 VKRISPNDPDATRKLKECEKAVQKIRFEEAISVGDEEKR 144
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.128 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,251,275
Number of extensions: 411979
Number of successful extensions: 2147
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2155
Number of HSP's successfully gapped: 14
Length of query: 317
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 216
Effective length of database: 11,762,187
Effective search space: 2540632392
Effective search space used: 2540632392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 156 (64.7 bits)