Os03g0800700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Thioredoxin H-type 5 (TRX-H-5).
FiT-DB / Search/ Help/ Sample detail
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Os03g0800700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Thioredoxin H-type 5 (TRX-H-5).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.98 | 0.339 | 12.5 | -1.03 | 1.75 | 0.36 | 0.245 | 2.84 | -0.162 | 8.32 | 27.76 | 372 | -- | -- |
| 61.08 | 0.364 | 12.4 | -0.517 | 1.74 | 0.329 | 0.635 | -- | -0.0565 | 8.32 | 39.44 | 314 | -- | -- |
| 51.87 | 0.335 | 12.5 | -1.01 | 1.76 | 0.412 | -- | 2.85 | -0.151 | 8.22 | 25.65 | 453 | -- | -- |
| 62.33 | 0.368 | 12.4 | -0.49 | 1.75 | 0.357 | -- | -- | -0.0442 | 8.33 | 75.39 | 326 | -- | -- |
| 185.04 | 0.634 | 12.5 | -0.751 | -- | 1.75 | -- | 3.6 | 0.0271 | -- | 37.03 | 564 | -- | -- |
| 62.16 | 0.37 | 12.4 | -0.589 | 1.82 | -- | 0.709 | -- | -0.0951 | 8.16 | -- | -- | -- | -- |
| 63.69 | 0.374 | 12.4 | -0.568 | 1.82 | -- | -- | -- | -0.0954 | 8.17 | -- | -- | -- | -- |
| 194.6 | 0.65 | 12.4 | -0.131 | -- | 1.83 | -- | -- | 0.194 | -- | 86.23 | 567 | -- | -- |
| 68.03 | 0.384 | 12.4 | -- | 1.7 | 0.591 | -- | -- | 0.0387 | 8.46 | 96.17 | 326 | -- | -- |
| 246.32 | 0.733 | 12.5 | -0.554 | -- | -- | -- | -- | -0.0741 | -- | -- | -- | -- | -- |
| 72.2 | 0.397 | 12.4 | -- | 1.82 | -- | -- | -- | -0.0321 | 8.2 | -- | -- | -- | -- |
| 195.02 | 0.65 | 12.4 | -- | -- | 1.88 | -- | -- | 0.214 | -- | 106.9 | 569 | -- | -- |
| 254.41 | 0.744 | 12.5 | -- | -- | -- | -- | -- | -0.0126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.70 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 2 | 51.03 | humidity | 70 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 4 | 51.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 7 | 51.58 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 10 | 51.63 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 15 | 51.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 24 | 51.97 | humidity | 70 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 33 | 52.18 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 42 | 52.25 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 43 | 52.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 48 | 52.32 | humidity | 70 | 10 | > th | dose dependent | rect. | 22 | 18 |
| 69 | 52.45 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 74 | 52.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 122 | 52.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 147 | 52.82 | temperature | 10 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 151 | 52.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 159 | 52.87 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 196 | 52.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 7 |
| 205 | 53.01 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 349 | 53.31 | temperature | 20 | 4320 | < th | dose independent | rect. | 12 | 11 |
| 357 | 53.32 | wind | 7 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 363 | 53.33 | temperature | 20 | 1440 | > th | dose independent | sin | 23 | NA |
| 380 | 53.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 18 |
| 393 | 53.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 18 |
| 443 | 53.45 | temperature | 20 | 1440 | < th | dose independent | sin | 23 | NA |
| 448 | 53.45 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 472 | 53.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 475 | 53.48 | humidity | 80 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 517 | 53.52 | temperature | 10 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 533 | 53.54 | humidity | 90 | 30 | < th | dose independent | rect. | 19 | 23 |
| 546 | 53.55 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 587 | 53.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 22 |
| 600 | 53.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 647 | 53.65 | temperature | 20 | 4320 | < th | dose dependent | rect. | 12 | 10 |
| 686 | 53.69 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 11 |
| 715 | 53.71 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 727 | 53.71 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 751 | 53.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 766 | 53.74 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 791 | 53.77 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 868 | 53.84 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 870 | 53.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 872 | 53.84 | humidity | 80 | 10 | > th | dose dependent | no | NA | NA |
| 878 | 53.84 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 880 | 53.84 | humidity | 80 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 894 | 53.85 | humidity | 80 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 902 | 53.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 912 | 53.87 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 917 | 53.87 | humidity | 80 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 935 | 53.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 949 | 53.89 | humidity | 80 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 954 | 53.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 981 | 53.92 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 984 | 53.92 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |