Os09g0401200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to HSP associated protein like.
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Os09g0401200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to HSP associated protein like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.79 | 0.214 | 11.3 | -1.46 | 0.301 | 0.616 | 0.135 | -1.3 | -0.426 | 12 | 7.506 | 826 | -- | -- |
| 22.02 | 0.219 | 11.2 | -1.22 | 0.301 | 0.607 | 0.336 | -- | -0.36 | 11.7 | 9.038 | 798 | -- | -- |
| 20.86 | 0.213 | 11.3 | -1.47 | 0.3 | 0.614 | -- | -1.4 | -0.43 | 12 | 4.944 | 826 | -- | -- |
| 22.53 | 0.221 | 11.2 | -1.21 | 0.298 | 0.608 | -- | -- | -0.361 | 11.7 | 8.927 | 781 | -- | -- |
| 22.64 | 0.223 | 11.2 | -1.24 | -- | 0.718 | -- | -0.361 | -0.38 | -- | 4.944 | 826 | -- | -- |
| 26.88 | 0.243 | 11.2 | -1.06 | 0.212 | -- | 0.333 | -- | -0.268 | 13.2 | -- | -- | -- | -- |
| 27.34 | 0.245 | 11.2 | -1.05 | 0.212 | -- | -- | -- | -0.266 | 13.3 | -- | -- | -- | -- |
| 22.75 | 0.223 | 11.2 | -1.19 | -- | 0.713 | -- | -- | -0.366 | -- | -19.23 | 63 | -- | -- |
| 56.1 | 0.351 | 11.2 | -- | 0.193 | 0.133 | -- | -- | -0.165 | 13.3 | 8.927 | 781 | -- | -- |
| 30.1 | 0.256 | 11.2 | -1.06 | -- | -- | -- | -- | -0.271 | -- | -- | -- | -- | -- |
| 56.29 | 0.351 | 11.2 | -- | 0.23 | -- | -- | -- | -0.149 | 13.4 | -- | -- | -- | -- |
| 57.71 | 0.355 | 11.2 | -- | -- | 0.348 | -- | -- | -0.192 | -- | 14.03 | 5 | -- | -- |
| 59.54 | 0.36 | 11.2 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 21 |
| 7 | 20.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 12 | 20.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 19 | 20.69 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 8 |
| 30 | 20.73 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 40 | 20.76 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 48 | 20.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 50 | 20.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 57 | 20.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 58 | 20.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 69 | 20.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 78 | 20.84 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 82 | 20.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 116 | 20.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 139 | 20.94 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 144 | 20.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 150 | 20.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 151 | 20.96 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 152 | 20.96 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 178 | 20.99 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 179 | 20.99 | humidity | 80 | 14400 | > th | dose dependent | sin | 10 | NA |
| 232 | 21.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 233 | 21.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 234 | 21.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 260 | 21.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 261 | 21.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 266 | 21.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 296 | 21.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 15 |
| 384 | 21.18 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 405 | 21.19 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 430 | 21.20 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 503 | 21.22 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 508 | 21.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 533 | 21.23 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 543 | 21.23 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 583 | 21.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 619 | 21.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 622 | 21.25 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 756 | 21.28 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 759 | 21.28 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 808 | 21.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 810 | 21.29 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 856 | 21.30 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 859 | 21.30 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 8 |