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Os05g0204900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Type 5 protein serine/threonine phosphatase 62 kDa isoform.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0128) R2 : 0.594
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.839 (0.033) R2dC : 0.577 R2C : 0.578
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.103 (0.027) R2dN8 : 0.0168 R2N8 : 0.017
σ : 0.242
deviance : 26.72
__
_____
C
peak time of C : 16.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.9 0.225 10.9 -0.0493 0.767 -0.462 0.159 -0.501 -0.131 16.9 39.45 74 -- --
23.34 0.225 10.9 -0.0368 0.769 -0.407 0.17 -- -0.126 16.8 38.41 72 -- --
22.96 0.223 10.9 -0.0492 0.77 -0.456 -- -0.529 -0.129 16.9 39.49 72 -- --
23.44 0.225 10.9 -0.0421 0.772 -0.398 -- -- -0.127 16.8 37.68 69 -- --
35.57 0.278 10.9 -0.215 -- -0.719 -- -0.316 -0.305 -- 10.22 414 -- --
26.59 0.242 10.9 -0.065 0.837 -- 0.0978 -- -0.111 16.3 -- -- -- --
26.61 0.242 10.9 -0.064 0.837 -- -- -- -0.11 16.3 -- -- -- --
28.27 0.248 10.9 -0.154 -- -0.81 -- -- -0.149 -- 0.67 529 -- --
23.49 0.226 10.9 -- 0.77 -0.399 -- -- -0.125 16.8 37.63 69 -- --
64.42 0.375 10.9 -0.0974 -- -- -- -- -0.132 -- -- -- -- --
26.72 0.242 10.9 -- 0.839 -- -- -- -0.103 16.3 -- -- -- --
28.67 0.249 10.9 -- -- -0.814 -- -- -0.14 -- 0.67 529 -- --
64.67 0.375 10.9 -- -- -- -- -- -0.122 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.91 temperature 15.0 90 > th dose independent rect. 15 17
2 19.97 temperature 15.0 10 > th dose independent rect. 15 18
4 20.20 temperature 10.0 10 > th dose dependent rect. 9 6
6 20.25 temperature 10.0 10 > th dose dependent rect. 15 18
7 20.27 temperature 10.0 90 > th dose dependent rect. 8 7
11 20.37 atmosphere 1010.0 90 < th dose independent rect. 15 17
18 20.57 atmosphere 1015.0 10 < th dose independent rect. 15 18
37 20.77 precipitation 0.1 90 < th dose independent rect. 8 7
39 20.77 precipitation 0.1 90 < th dose dependent rect. 8 7
40 20.79 radiation 1.0 10 > th dose independent rect. 9 6
43 20.83 temperature 10.0 90 > th dose independent rect. 8 7
44 20.83 atmosphere 1015.0 90 < th dose independent rect. 8 7
47 20.85 atmosphere 995.0 90 > th dose independent rect. 8 7
48 20.87 temperature 10.0 10 > th dose independent rect. 9 6
50 20.87 atmosphere 995.0 10 > th dose independent rect. 9 6
51 20.87 atmosphere 1015.0 10 < th dose independent rect. 9 6
53 20.87 precipitation 0.1 10 < th dose independent rect. 9 6
54 20.87 wind 9.0 90 < th dose independent rect. 8 7
56 20.87 precipitation 0.1 10 < th dose dependent rect. 9 6
57 20.88 wind 1.0 30 > th dose independent rect. 9 6
61 20.89 radiation 40.0 90 < th dose independent rect. 15 17
78 20.94 temperature 10.0 1440 > th dose independent rect. 10 6
81 20.94 temperature 10.0 1440 > th dose independent rect. 16 18
86 20.96 wind 9.0 10 < th dose independent rect. 9 6
91 20.97 temperature 15.0 270 > th dose independent rect. 11 21
92 20.98 atmosphere 995.0 90 > th dose independent rect. 15 17
97 21.01 atmosphere 995.0 10 > th dose independent rect. 15 18
102 21.03 wind 9.0 30 < th dose independent rect. 15 18
110 21.05 temperature 10.0 270 > th dose dependent rect. 8 3
113 21.06 temperature 10.0 270 > th dose dependent rect. 9 1
114 21.07 radiation 40.0 90 < th dose independent rect. 4 16
115 21.07 precipitation 0.1 10 < th dose independent rect. 15 18
116 21.07 radiation 30.0 90 < th dose independent rect. 13 20
117 21.07 precipitation 0.1 10 < th dose dependent rect. 15 18
120 21.09 radiation 40.0 270 < th dose independent rect. 13 18
127 21.12 radiation 40.0 270 < th dose independent rect. 11 20
128 21.13 radiation 30.0 90 < th dose independent rect. 3 6
141 21.16 precipitation 0.1 90 < th dose independent rect. 15 17
142 21.16 precipitation 0.1 90 < th dose dependent rect. 15 17
159 21.20 humidity 50.0 30 > th dose independent rect. 9 6
165 21.21 wind 7.0 270 < th dose independent rect. 8 17
169 21.21 radiation 40.0 270 < th dose dependent rect. 2 15
170 21.22 humidity 50.0 90 > th dose independent rect. 15 17
172 21.23 radiation 20.0 270 < th dose independent rect. 1 8
183 21.28 temperature 30.0 90 < th dose independent rect. 3 6
188 21.29 humidity 90.0 10 < th dose independent rect. 9 6
190 21.29 atmosphere 1010.0 270 < th dose independent rect. 12 9
193 21.30 wind 7.0 270 < th dose independent rect. 7 19
210 21.34 wind 7.0 270 < th dose independent rect. 6 21
222 21.36 temperature 10.0 90 > th dose dependent rect. 3 5
242 21.40 humidity 50.0 10 > th dose independent rect. 15 18
243 21.40 temperature 10.0 10 > th dose dependent rect. 4 5
244 21.40 radiation 30.0 270 < th dose dependent rect. 2 7
261 21.43 temperature 10.0 270 > th dose dependent rect. 3 3
276 21.46 wind 7.0 90 < th dose independent rect. 3 6
277 21.46 humidity 60.0 90 > th dose independent rect. 3 6
279 21.46 wind 7.0 270 < th dose independent rect. 1 7
283 21.46 wind 9.0 270 < th dose independent rect. 5 23
294 21.47 radiation 40.0 90 < th dose dependent rect. 13 20
296 21.48 temperature 10.0 90 > th dose independent rect. 3 6
300 21.48 atmosphere 995.0 90 > th dose independent rect. 3 6
301 21.48 atmosphere 1015.0 90 < th dose independent rect. 3 6
302 21.48 temperature 10.0 90 > th dose independent rect. 9 18
308 21.48 radiation 40.0 90 < th dose dependent rect. 15 18
313 21.49 precipitation 0.1 90 < th dose independent rect. 9 18
318 21.49 precipitation 0.1 90 < th dose dependent rect. 9 18
319 21.50 precipitation 0.1 90 < th dose independent rect. 3 6
320 21.50 temperature 10.0 270 > th dose independent rect. 1 7
322 21.50 temperature 30.0 270 < th dose independent rect. 1 7
323 21.50 humidity 50.0 270 > th dose independent rect. 1 7
325 21.50 atmosphere 995.0 270 > th dose independent rect. 1 7
326 21.50 atmosphere 1015.0 270 < th dose independent rect. 1 7
327 21.50 radiation 40.0 270 < th dose independent rect. 1 7
328 21.50 humidity 70.0 90 > th dose independent rect. 3 8
331 21.50 precipitation 0.1 90 < th dose dependent rect. 3 6
335 21.51 precipitation 0.1 270 < th dose independent rect. 1 7
339 21.51 precipitation 0.1 270 < th dose dependent rect. 1 7
346 21.52 temperature 10.0 270 > th dose dependent rect. 1 7
380 21.55 radiation 30.0 90 < th dose independent rect. 3 8
381 21.55 wind 9.0 270 < th dose independent rect. 18 9
389 21.55 temperature 30.0 270 < th dose dependent rect. 20 6
392 21.55 radiation 10.0 270 < th dose dependent rect. 18 9
395 21.56 radiation 10.0 270 < th dose independent rect. 18 9
405 21.57 wind 5.0 270 < th dose independent rect. 3 3
407 21.57 temperature 10.0 270 > th dose independent rect. 18 9
408 21.57 humidity 50.0 270 > th dose independent rect. 18 9
412 21.57 temperature 10.0 270 > th dose independent rect. 3 15
413 21.57 atmosphere 1015.0 270 < th dose independent rect. 3 15
427 21.58 wind 9.0 10 < th dose independent rect. 9 19
433 21.58 radiation 1.0 90 > th dose dependent rect. 8 7
436 21.59 radiation 10.0 270 < th dose independent rect. 3 4
444 21.59 radiation 40.0 10 < th dose independent rect. 4 16
448 21.59 radiation 20.0 270 < th dose dependent rect. 3 4
467 21.61 temperature 10.0 270 > th dose independent rect. 3 3
469 21.61 temperature 30.0 270 < th dose independent rect. 3 3
470 21.61 humidity 50.0 270 > th dose independent rect. 3 3
473 21.61 atmosphere 995.0 270 > th dose independent rect. 3 3
474 21.61 atmosphere 1010.0 270 < th dose independent rect. 3 3
486 21.61 temperature 15.0 270 > th dose independent rect. 12 9
492 21.61 temperature 10.0 270 > th dose independent rect. 6 21
507 21.62 radiation 20.0 270 < th dose dependent rect. 2 11
508 21.63 precipitation 0.1 270 < th dose independent rect. 3 3
523 21.63 radiation 30.0 10 < th dose independent rect. 12 21
527 21.63 precipitation 0.1 270 < th dose dependent rect. 3 3
562 21.65 temperature 10.0 270 > th dose independent rect. 7 19
572 21.66 atmosphere 995.0 270 > th dose independent rect. 18 9
591 21.67 precipitation 0.1 270 < th dose independent rect. 7 19
596 21.67 wind 9.0 270 < th dose dependent rect. 7 6
600 21.67 precipitation 0.1 270 < th dose dependent rect. 7 19
616 21.68 precipitation 0.1 270 < th dose independent rect. 18 9
626 21.68 precipitation 0.1 270 < th dose dependent rect. 18 9
644 21.69 precipitation 0.1 270 < th dose independent rect. 6 21
653 21.69 precipitation 0.1 270 < th dose dependent rect. 6 21
701 21.73 radiation 20.0 270 < th dose dependent sin 5 NA
705 21.74 humidity 50.0 270 > th dose independent rect. 9 1
731 21.76 temperature 10.0 270 > th dose independent rect. 9 1
732 21.76 atmosphere 995.0 270 > th dose independent rect. 9 1
733 21.76 atmosphere 1015.0 270 < th dose independent rect. 9 1
734 21.76 precipitation 0.1 270 < th dose independent rect. 9 1
748 21.76 precipitation 0.1 270 < th dose dependent rect. 9 1
750 21.77 wind 5.0 270 < th dose independent rect. 4 1
752 21.77 wind 9.0 270 < th dose independent rect. 9 1
771 21.78 wind 1.0 270 > th dose independent rect. 9 1
795 21.79 precipitation 0.1 270 < th dose independent rect. 3 15
803 21.79 precipitation 0.1 270 < th dose dependent rect. 3 15
813 21.80 wind 9.0 270 < th dose dependent rect. 8 3
824 21.81 temperature 10.0 270 > th dose independent rect. 4 1
826 21.81 temperature 30.0 270 < th dose independent rect. 4 1
827 21.81 humidity 50.0 270 > th dose independent rect. 4 1
830 21.81 atmosphere 995.0 270 > th dose independent rect. 4 1
831 21.81 atmosphere 1010.0 270 < th dose independent rect. 4 1
833 21.81 radiation 20.0 270 < th dose independent rect. 4 1
859 21.81 temperature 30.0 270 < th dose independent rect. 19 8
878 21.81 temperature 10.0 270 > th dose independent rect. 5 23
879 21.81 temperature 10.0 270 > th dose dependent rect. 4 1
881 21.81 radiation 1.0 270 < th dose dependent rect. 4 1
896 21.82 precipitation 0.1 270 < th dose independent rect. 4 1
908 21.82 radiation 20.0 270 < th dose dependent rect. 4 1
911 21.82 precipitation 0.1 270 < th dose dependent rect. 4 1
919 21.83 radiation 1.0 270 < th dose independent rect. 4 1
934 21.83 wind 9.0 90 < th dose dependent rect. 3 6
965 21.85 radiation 1.0 270 > th dose dependent rect. 8 3