BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0460900 Os08g0460900|Os08g0460900
(584 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0460900 Cyclin-like F-box domain containing protein 1127 0.0
Os08g0461300 Cyclin-like F-box domain containing protein 643 0.0
Os08g0461100 Leucine-rich repeat 2 containing protein 377 e-104
Os08g0460800 Cyclin-like F-box domain containing protein 336 3e-92
Os08g0460700 Leucine-rich repeat 2 containing protein 277 2e-74
Os09g0443000 Cyclin-like F-box domain containing protein 198 8e-51
Os08g0462300 Cyclin-like F-box domain containing protein 185 8e-47
Os08g0462200 134 1e-31
Os08g0461800 Conserved hypothetical protein 130 3e-30
Os08g0267000 Cyclin-like F-box domain containing protein 122 6e-28
Os08g0461000 Cyclin-like F-box domain containing protein 122 9e-28
Os08g0461400 Conserved hypothetical protein 110 3e-24
Os08g0267800 Cyclin-like F-box domain containing protein 105 1e-22
Os08g0461700 Conserved hypothetical protein 103 3e-22
Os09g0443100 100 2e-21
Os08g0266900 67 5e-11
>Os08g0460900 Cyclin-like F-box domain containing protein
Length = 584
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/584 (94%), Positives = 551/584 (94%)
Query: 1 MDALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDAL 60
MDALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDAL
Sbjct: 1 MDALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDAL 60
Query: 61 LLRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFMYQKLNSCLFS 120
LLRRTAPVRSFRLATRDRSWSPTAFHDW TLRYEFMYQKLNSCLFS
Sbjct: 61 LLRRTAPVRSFRLATRDRSWSPTAFHDWLLHLHLRGGLRDLELTLRYEFMYQKLNSCLFS 120
Query: 121 FRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEASL 180
FRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEASL
Sbjct: 121 FRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEASL 180
Query: 181 IDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCLFGPNYAKYLMRMA 240
IDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCLFGPNYAKYLMRMA
Sbjct: 181 IDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCLFGPNYAKYLMRMA 240
Query: 241 HVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILATFCLLRSAPVLEE 300
HVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILATFCLLRSAPVLEE
Sbjct: 241 HVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILATFCLLRSAPVLEE 300
Query: 301 LDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKARAL 360
LDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKARAL
Sbjct: 301 LDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKARAL 360
Query: 361 RVLSLTLASNSQFSIEEAITDITEYPRASPYAQVIFAGREPECANDEWNGFVDLSAELSD 420
RVLSLTLASNSQFSIEEAITDITEYPRASPYAQVIFAGREPECANDEWNGFVDLSAELSD
Sbjct: 361 RVLSLTLASNSQFSIEEAITDITEYPRASPYAQVIFAGREPECANDEWNGFVDLSAELSD 420
Query: 421 LEDIQTSGRRSLDTVNPRRRQRLNGESVAXXXXXXXXXXXXXXXXXXHHMRRMQALNEMD 480
LEDIQTSGRRSLDTVNPRRRQRLNGESVA HHMRRMQALNEMD
Sbjct: 421 LEDIQTSGRRSLDTVNPRRRQRLNGESVAQLQQLEEQLLELEKEEEEHHMRRMQALNEMD 480
Query: 481 QESENVFRHQEYIISTIEFLSKQCNLHQFSLPPWPGRPSMLSSHTATTGPGDTPVDPVDN 540
QESENVFRHQEYIISTIEFLSKQCNLHQFSLPPWPGRPSMLSSHTATTGPGDTPVDPVDN
Sbjct: 481 QESENVFRHQEYIISTIEFLSKQCNLHQFSLPPWPGRPSMLSSHTATTGPGDTPVDPVDN 540
Query: 541 ADVHVDSQEDHATLDAADAHVGSPTKNVANGAPNGFADSPEGHI 584
ADVHVDSQEDHATLDAADAHVGSPTKNVANGAPNGFADSPEGHI
Sbjct: 541 ADVHVDSQEDHATLDAADAHVGSPTKNVANGAPNGFADSPEGHI 584
>Os08g0461300 Cyclin-like F-box domain containing protein
Length = 432
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/407 (78%), Positives = 347/407 (85%), Gaps = 3/407 (0%)
Query: 2 DALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALL 61
DALGSLPLDVLD+ILSRLHIHDVVRTSALSR+WRRRWESLPTV L SPGI ASDVDALL
Sbjct: 25 DALGSLPLDVLDSILSRLHIHDVVRTSALSRSWRRRWESLPTVDLTRSPGISASDVDALL 84
Query: 62 LRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXX---TLRYEFMYQKLNSCL 118
LRRTAP RSFRLATRDRSWSPTAFHDW TLRY ++ KLNSCL
Sbjct: 85 LRRTAPARSFRLATRDRSWSPTAFHDWLLRLSRGGGGGGLRDLELTLRYTYINSKLNSCL 144
Query: 119 FSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEA 178
FSFRELTSL+L+CCGLP++P EFAGFPNLKT++ S+V+ Q GGRG+ATLIAASPVLQE
Sbjct: 145 FSFRELTSLRLHCCGLPHVPTEFAGFPNLKTMYLSVVKVQRHGGRGLATLIAASPVLQEV 204
Query: 179 SLIDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCLFGPNYAKYLMR 238
+LID LIGDGPDEDWVIR SNLRKLTIALG +YGGR+ED+ RLEECCLFG NYAKYL
Sbjct: 205 TLIDVVLIGDGPDEDWVIRASNLRKLTIALGSEYGGRMEDLPRLEECCLFGLNYAKYLTG 264
Query: 239 MAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILATFCLLRSAPVL 298
MA VTKL+FYCN +LSTEVDVLERLPFLFENLRSL+LGVNFC++SHILA FCLLRSAPVL
Sbjct: 265 MARVTKLTFYCNCMLSTEVDVLERLPFLFENLRSLILGVNFCMMSHILAIFCLLRSAPVL 324
Query: 299 EELDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKAR 358
EELDVW +S+G QEM+ +D F +AQW+NHMFAKLHVVRMKKV CL NEM IEFILSKAR
Sbjct: 325 EELDVWNWSEGAQEMEANDVFLNAQWINHMFAKLHVVRMKKVYCLNNEMHFIEFILSKAR 384
Query: 359 ALRVLSLTLASNSQFSIEEAITDITEYPRASPYAQVIFAGREPECAN 405
LRVLSLTLAS+S SIEEAI DITEYPRASP AQVIF G EPE AN
Sbjct: 385 VLRVLSLTLASDSLSSIEEAIIDITEYPRASPDAQVIFMGVEPESAN 431
>Os08g0461100 Leucine-rich repeat 2 containing protein
Length = 671
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 242/544 (44%), Positives = 303/544 (55%), Gaps = 43/544 (7%)
Query: 46 LLNSPGIGASDVDALLLRRTA--PVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXX 103
L SPG+ ASDVDA+LLRR+A PVR+FRL RD SW A HDW
Sbjct: 140 LTRSPGVAASDVDAVLLRRSAAAPVRAFRLVARDPSWFVDALHDWLLHLSRNGVQALELW 199
Query: 104 TLRYEFMYQKLNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGR 163
Y F +L+SCLFS REL L L C LP F GFPNLK L V G
Sbjct: 200 FPTYNF---QLHSCLFSCRELACLDLDSCRLPPARMGFEGFPNLKKLRLHEVTLPEHMGN 256
Query: 164 GIATLIAASPVLQEASLIDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLE 223
+A LI+ASP+L+E L+ L+GD PDE+WVIR NLRKL + YGGR+E++ RLE
Sbjct: 257 MLAALISASPLLEEVELVSVFLVGDYPDEEWVIRAPNLRKLIMVAAFPYGGRVEELPRLE 316
Query: 224 ECCLFGPNYAKYLMRMAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILS 283
+ L GPNYAK+L MAHVTKL F C+ +LSTEVDVLE+LPFLFENLRSLV+ VNFC +S
Sbjct: 317 QGILCGPNYAKFLTGMAHVTKLEFMCHYMLSTEVDVLEQLPFLFENLRSLVISVNFCKMS 376
Query: 284 HILATFCLLRSAPVLEELDVWVF-----------------SDGTQEMKTDDEFFDAQWVN 326
HIL FCLLRSAPVLEELDV V S+ Q++ +DEF +AQ
Sbjct: 377 HILFMFCLLRSAPVLEELDVVVMLNDHLQIHYAITCFKGQSNDAQDIDANDEFLNAQPTY 436
Query: 327 HMFAKLHVVRMKKVSCLCNEMLLIEFILSKARALRVLSLTLASNSQFSIEEAITDITEYP 386
MFAKL VVRMKKV+CLCNEM +EF+L+KAR LRVLS+ +S S E+A ITE+P
Sbjct: 437 DMFAKLRVVRMKKVACLCNEMHFMEFVLNKARVLRVLSVYPSSGVTCSNEQAF--ITEHP 494
Query: 387 RASPYAQVIFAGREPECANDEWNGFVDLSAELSDLEDIQTSGRRSLDTVNPRRRQRLNGE 446
R SP AQVIF R E AN NG++D + LE +T +D +P + RL+ +
Sbjct: 495 RVSPDAQVIFMNR--ESAN---NGYMDTPSVNYKLETTRTGN--WIDLAHPCKINRLDLD 547
Query: 447 SVAXXXXXXXXXXXXXXXXXXHHMRRMQALNEMDQESENVFRH-QEYIISTIEFLSKQCN 505
+V QAL+E + N F ++Y S +++LS+Q N
Sbjct: 548 AV-DQHKHIEEMLLIRQKLLKERKEMAQALHEDKKLLLNYFAAVKKYFTSNLKYLSEQLN 606
Query: 506 LHQFSLPPWPGRPSMLSSHT-----ATTGPGDTPVDPVDNADVHVDSQEDHATLDAADAH 560
+ P S + A T P D +V DS+ D + A+ A
Sbjct: 607 ISIPPFPEPSSVSSSSHPTSPRLAEALTDPASRSAD-----NVQADSRADQVAIGASSAR 661
Query: 561 VGSP 564
SP
Sbjct: 662 ANSP 665
>Os08g0460800 Cyclin-like F-box domain containing protein
Length = 372
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 237/399 (59%), Gaps = 57/399 (14%)
Query: 2 DALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALL 61
DALG+LP++VLDNIL RLHI+DVVRTSALSRAWRRRWESLPTV L SPG+ ASDVDA+L
Sbjct: 27 DALGALPVEVLDNILGRLHIYDVVRTSALSRAWRRRWESLPTVDLTRSPGVAASDVDAVL 86
Query: 62 LRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFMYQKLNSCLFSF 121
LRR+APVR+FRLA RD SW A HDW L + +L+SCLFS
Sbjct: 87 LRRSAPVRAFRLAARDPSWFVDALHDWLLYLSRSGVQALY---LWFPTPSFRLHSCLFSC 143
Query: 122 RELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEASLI 181
RELTSL L C LP P+ F GF NLK LH + V G + +A L A SP+L++ L+
Sbjct: 144 RELTSLDLEGCRLPPAPSGFEGFQNLKKLHLTKVSLPEHGDKALAALFAGSPLLEDVELM 203
Query: 182 DGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCLFGPNYAKYLMRMAH 241
+ L+GDG DE WVIR NLRKL + Y GR+ED+ RLEE L GPNYAK+L MAH
Sbjct: 204 NALLVGDGADE-WVIRAPNLRKLIMVAPFPYAGRVEDLPRLEEGILCGPNYAKFLTGMAH 262
Query: 242 VTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILATFCLLRSAPVLEEL 301
VTKL F C+ + D + ++
Sbjct: 263 VTKLEFVCSFMRGQGDDAQD------------------------------------IDAN 286
Query: 302 DVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKARALR 361
D ++ + T +M FAKLHVVRMKKV+CLCNEM +EF+L+KA LR
Sbjct: 287 DEFLNAQSTNDM---------------FAKLHVVRMKKVACLCNEMHFMEFVLNKAGVLR 331
Query: 362 VLSLTLASNSQFSIEEAITDITEYPRASPYAQVIFAGRE 400
VLS+ +S S S E+ I ITE+PR SP AQVIF RE
Sbjct: 332 VLSVYPSSGSTCSNEQTI--ITEHPRVSPDAQVIFMNRE 368
>Os08g0460700 Leucine-rich repeat 2 containing protein
Length = 297
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/262 (55%), Positives = 178/262 (67%), Gaps = 5/262 (1%)
Query: 20 HIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALLLRRTAPVRSFRLATRDR- 78
HI++VVRTSALSRAWRRRW +LP+V L SPGI DVDA+LLRR A +R+FRL R R
Sbjct: 38 HIYEVVRTSALSRAWRRRWAALPSVDLARSPGISEPDVDAILLRRPAALRTFRLVARARK 97
Query: 79 -SWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFMYQKLNSCLFSFRELTSLKLYCCGLPNL 137
+WS A H W L + + +L+ CLFS E TSL L C LP
Sbjct: 98 GTWSVDALHHWLLYLSRSGVQAL---DLSFPELRFRLHPCLFSCGEFTSLALNSCRLPPA 154
Query: 138 PAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEASLIDGKLIGDGPDEDWVIR 197
P+ FAGFPN+KTL V GG+ +A LIAASP+L++ L+ KLIGDGPDE+WVIR
Sbjct: 155 PSGFAGFPNIKTLRLEDVDVPRHGGKEVAALIAASPLLEDLGLLAVKLIGDGPDEEWVIR 214
Query: 198 GSNLRKLTIALGHKYGGRIEDIARLEECCLFGPNYAKYLMRMAHVTKLSFYCNSILSTEV 257
NLR LT+ +GGR+ED+ RL+E LFGPN AK+L M+ VTKL F+CN +LSTEV
Sbjct: 215 APNLRNLTMVCETAFGGRVEDLPRLDEGRLFGPNCAKFLAGMSQVTKLDFFCNCMLSTEV 274
Query: 258 DVLERLPFLFENLRSLVLGVNF 279
DVLERLPFLF+NL++L L VNF
Sbjct: 275 DVLERLPFLFKNLKNLSLAVNF 296
>Os09g0443000 Cyclin-like F-box domain containing protein
Length = 554
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 217/407 (53%), Gaps = 28/407 (6%)
Query: 2 DALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALL 61
DAL SLP DVLD +L+RL + D VRTSALS + P AS A
Sbjct: 31 DALISLPPDVLDGVLTRLGLRDAVRTSALS-------RAWRRRRARRWPPSTASSSAACP 83
Query: 62 LRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFMYQKLNSCLFSF 121
R VRSF A D+ + A HDW + + + ++S +FS
Sbjct: 84 GR----VRSFS-AYVDKLTTRRA-HDWILVLARRGVESLDLASPIHNHL--AVHSSVFSC 135
Query: 122 RELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEASLI 181
L L L+ C +P LP FAGFPNL++L V ++ G + +I SP+L E ++
Sbjct: 136 DRLAYLNLFACDIPPLPPGFAGFPNLRSLTLDHVWLRAGGEYQLEEIIENSPLL-EMLVL 194
Query: 182 DGKLIGDGPDE-DWVIRGSNLRKLTIALGHKYGGRIEDIARLEECC------LFGPNYAK 234
G I DG D +WVIR NL+ LTI + YG + D+ RL L G ++A+
Sbjct: 195 SGIFI-DGDDIINWVIRAPNLQHLTICSPNDYGWNLLDLPRLRSAVIDLWDYLGGRDFAE 253
Query: 235 YLMRMAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLG---VNFCILSHILATFCL 291
+L ++ HV KL + + S +LE LP F++L+SL ++FC L IL FCL
Sbjct: 254 FLGKLLHVRKLHLFVSYQPSNGAKILETLPCTFDSLKSLKSLKLYMDFCELPAILTIFCL 313
Query: 292 LRSAPVLEELDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIE 351
LR+AP LE+L + + +D Q+++ + F +A+W M A L +V++ ++S L NEM IE
Sbjct: 314 LRNAPNLEKLKIMI-TDNEQKVEANGVFQNAEWTGGMCANLQIVQITRISWLPNEMSFIE 372
Query: 352 FILSKARALRVLSLTLASNSQFSIEEAITDITEYPRASPYAQVIFAG 398
ILSKA LR +S+T S E+A++++ +Y RASP AQ++F G
Sbjct: 373 LILSKASLLRTISVTHGDKCLMSNEDALSELLKYKRASPQAQILFKG 419
>Os08g0462300 Cyclin-like F-box domain containing protein
Length = 418
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 210/405 (51%), Gaps = 22/405 (5%)
Query: 2 DALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALL 61
D L LP +++D+I+SRL I DVVRTSALSRAWRRRWES+ + L A+ + ++L
Sbjct: 19 DFLAGLPPEIVDDIISRLDIRDVVRTSALSRAWRRRWESVRGLDLSFRSSAPAAAISSVL 78
Query: 62 LRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFMYQK---LNSCL 118
R APVR L R + A H W L +EF++ + L+ +
Sbjct: 79 KRAAAPVRGLGLRVPGRRFR-RAVH-W---LRLLPRKRVQSLDLHFEFVFGEKPSLDPSI 133
Query: 119 FSFRELTSLKLYCC--GLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQ 176
S ELT+L L C P F GFP L L S + GGR + +IAASP+L
Sbjct: 134 LSCLELTTLVLEGCIFPPSPPPPSFVGFPELTKLSLSEIDLPRHGGRRLEAMIAASPLLV 193
Query: 177 EASLIDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCLFGPN----- 231
E SL + + + E W IRG NLR + I + YG RI ++ RLE +F
Sbjct: 194 ELSLSNVRSLHHW--ERWFIRGPNLRSVWIWTDYDYGCRIGELPRLEHAIVFASAIKTEV 251
Query: 232 YAKYLMRMAHVTKLSFYCNSILST-EVDVLERLPFLFENLRSLVLGVNFCILSHILATFC 290
K L ++H L F ++I + ER F F+NLRSL L +S FC
Sbjct: 252 LCKILEGISHAETLGF--DAITDQFNGNPPERFSFTFQNLRSLDLHACLDQISSTSWVFC 309
Query: 291 LLRSAPVLEELDVWVFSDGTQEMKTDDE-FFDAQWVNHMFAKLHVVRMKKVSCLCNEMLL 349
+LRSAP LE L++ V D + E F +AQ + +F +L V + + C NEM
Sbjct: 310 ILRSAPNLETLEIEVDCDDDEVDAGSVEGFANAQASDDIFPRLRDVWLHSIDCSSNEMCF 369
Query: 350 IEFILSKARALRVLSLTLASNSQFSIEEAITDITEYPRASPYAQV 394
I+F+LSKAR+L + S+ + S S+ S +EA ++ +Y RASP A++
Sbjct: 370 IKFVLSKARSLELFSVRVTS-SRLSYQEACIEMAKYKRASPLAKL 413
>Os08g0462200
Length = 358
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 169/346 (48%), Gaps = 24/346 (6%)
Query: 2 DALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALL 61
D L +LP +++DNI+SRL + DVVRTS LS AWRRRW S+ + L A+ + ++L
Sbjct: 17 DYLAALPPEIVDNIISRLGVRDVVRTSVLSHAWRRRWRSVRGLDLDFRSSDPAAAISSVL 76
Query: 62 LRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFM-----YQKLNS 116
R APVR+ L R W FH L +E + L+
Sbjct: 77 KRSAAPVRTVTLRV-PRRW----FHRAVRWLRLLPRKRVQSLHLYFEMISIIEGKHNLDP 131
Query: 117 CLFSFRELTSLKLYCCGL-PNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVL 175
+FS EL+SL L C P P F GF L L S V+ G R + +IAASP+L
Sbjct: 132 SIFSCLELSSLSLAGCTFPPPQPPSFVGFLKLTKLSLSEVELPPHGERQLEAMIAASPLL 191
Query: 176 QEASLIDGKLIGDGPDEDWVIRGSNLRKLTI-ALGHKYGGRIEDIARLEECCLFGPN--- 231
E SL + E W +RG N+R L I A+ +G RI ++ RLE+ +F +
Sbjct: 192 LELSLDNVHSFHHS--EVWFVRGPNIRSLRIWAVDQDFGCRIGELPRLEDAVIFLDSEVT 249
Query: 232 ---YAKYLMRMAHVTKLSFYCNSILSTEVD-VLERLPFLFENLRSLVLGVNFCILSHILA 287
K L +AHV L F N+++ D ER F F+NLRSL L +S
Sbjct: 250 TQVLCKTLEGIAHVESLDF--NALMHQFSDNPPERFSFTFQNLRSLDLHACLDQISSTSL 307
Query: 288 TFCLLRSAPVLEELDVWV-FSDGTQEMKTDDEFFDAQWVNHMFAKL 332
F +LR AP LE+L++ V D + T + F +AQ + +F +L
Sbjct: 308 VFSILRCAPNLEKLEIEVGCYDDLVDDGTVEGFANAQTSDDIFPRL 353
>Os08g0461800 Conserved hypothetical protein
Length = 243
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 127/241 (52%), Gaps = 12/241 (4%)
Query: 168 LIAASPVLQEASLIDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCL 227
+I SP L L + + + D EDW+I+ NL +LTI YG +I+D+ +++ +
Sbjct: 1 MIRMSPSLVSLELSNVE-VTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANI 59
Query: 228 FGPNYA------KYLMRMAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCI 281
+Y+ K L +A V +L + I S + +VLE + F+ LRSL L NF
Sbjct: 60 NIEDYSIDRDFVKLLTSLAQVGELELF---IPSADGNVLEGISCSFQKLRSLTLHTNFYK 116
Query: 282 LSHILATFCLLRSAPVLEELDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVS 341
S IL+TF LL AP L L++ + Q + D +F +A W N +FA L V +K +
Sbjct: 117 ASSILSTFGLLTRAPNLLHLEIEITDHENQSDEVDIDFLNALWTNSLFANLDFVSIKSAT 176
Query: 342 CLCNEMLLIEFILSKARALRVLSLTLASNSQFSI--EEAITDITEYPRASPYAQVIFAGR 399
C NEM IEF+LSKAR L + +S EEAI ++ +Y RASP A+V F
Sbjct: 177 CWSNEMRFIEFVLSKARLLGEFYIYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFRDM 236
Query: 400 E 400
E
Sbjct: 237 E 237
>Os08g0267000 Cyclin-like F-box domain containing protein
Length = 439
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 187/419 (44%), Gaps = 25/419 (5%)
Query: 2 DALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALL 61
D L SLP DVLD IL+R+ +VRT LS AWRRRWES+ + + G + L
Sbjct: 8 DELMSLPTDVLDIILARIPFDLLVRTCCLSHAWRRRWESVRYLDIRLGWGCRGAPSARDL 67
Query: 62 LRRTAPVRSFRLATRDRSWS--PTAFHDWXXXXXXXXXXXXXXXTLRYEFM--YQKLNSC 117
R APV FR R + PT F + Y ++
Sbjct: 68 WRCAAPVVGFRACVHARHFHHLPTWFPALASKGVRELAIECDGVRRGHPDTPPYWVIDQG 127
Query: 118 LFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRG-IATLIAASPVLQ 176
LFS L L L C +P P F GFP+L +L V + GG + L+AA+P+L
Sbjct: 128 LFSCAALAVLHLEDCDMPLAPPGFRGFPSLVSLTLRGVTLPAEGGGARVEHLVAAAPLLA 187
Query: 177 EASL--IDGKLIGD--GPDEDWVIRGSNLRKLTIALGHKYGGRI-EDIARLEECCL-FGP 230
E L +D + + D P W +R LR L +A G RI E+ LEE + G
Sbjct: 188 ELRLDDVDVEELEDPTPPLYKWAVRAPRLRVLKMATRLDIGCRIPEEPPLLEEAYIDIGN 247
Query: 231 NYAKY---LMRMAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILA 287
++ + + V KL F +I LE + F+NLR + + NF ++
Sbjct: 248 SFMSFHEIFRGIITVRKLWF---NIHEFNEYPLEGISCKFDNLREVHVTTNFGQQPSTMS 304
Query: 288 TFCLLRSAPVLEELDV------WVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVS 341
F LLR AP +E+L + + D E++ DD F + + F+ L V + ++
Sbjct: 305 LFSLLRCAPYIEDLSIEAEDISFSHRDDPYEIEEDD-FISSGINENSFSSLKYVSLSGIT 363
Query: 342 CLCNEMLLIEFILSKARALRVLSLT-LASNSQFSIEEAITDITEYPRASPYAQVIFAGR 399
N++ ++F+LSK +L+ ++T L S S +A + + RAS Q F R
Sbjct: 364 YSSNQLRFMKFLLSKTESLQSFAVTFLYSKSNKEYVKACRVLRAFRRASASPQARFEVR 422
>Os08g0461000 Cyclin-like F-box domain containing protein
Length = 279
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 3 ALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDA--L 60
+L SLP ++L+NI+ RL + VRTSALSR WRRRWES P + G + +
Sbjct: 25 SLNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFGWGSGEAGAAAAVGQI 84
Query: 61 LLRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFMYQKLNSCLFS 120
L R PVR FR + S A + + F++ L++ +FS
Sbjct: 85 LARYACPVRHFRHGWIESGGSARADEWFVVLAGRGVEHLALIFSEADNFLFHTLHAAIFS 144
Query: 121 FRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIATLIAASPVLQEASL 180
RELT L+L C LP P++F+GFPNL L +MV G R + +I+++P+LQ L
Sbjct: 145 CRELTKLELGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSAPLLQSLEL 204
Query: 181 IDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCL 227
+ + G DE WVIR NL+ L I L + IE + ++ +
Sbjct: 205 KNVSMEGGEWDE-WVIRAPNLKDLIIQLEFDFLWEIEQLPSIQTATI 250
>Os08g0461400 Conserved hypothetical protein
Length = 207
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 115/203 (56%), Gaps = 9/203 (4%)
Query: 188 DGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCLFGP------NYAKYLMRMAH 241
+G WVI+ NL+ I + G +I D+ LEE + P ++ K + ++
Sbjct: 8 NGVYHQWVIQAPNLQNFFITGLYDDGWQIGDLTFLEEATVDWPLYSYDRDFVKLITGLSQ 67
Query: 242 VTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILATFCLLRSAPVLEEL 301
+L F ++ +V+VLE L F+NL+ L L + +LS++L+ FC++R+A LE L
Sbjct: 68 ARELDF---AMPVRDVNVLEGLSCSFKNLKCLSLCTSLHLLSNVLSFFCIIRNASKLETL 124
Query: 302 DVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKARALR 361
+ +F D TQ+ + D++F + QW + +F+ L V ++ ++C +EM IEFILSKAR L
Sbjct: 125 RIKLFDDSTQDDEVDNDFLNGQWTDDLFSNLKSVYVRNMTCKLSEMHFIEFILSKARNLE 184
Query: 362 VLSLTLASNSQFSIEEAITDITE 384
+ LA + S EEA+ ++ +
Sbjct: 185 KNDVCLAEDCSKSNEEAVIELAK 207
>Os08g0267800 Cyclin-like F-box domain containing protein
Length = 463
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 198/455 (43%), Gaps = 84/455 (18%)
Query: 2 DALGSLPLDVLDN-ILSRLHIHDVVRTSALSRAWRRRWESLPTVGL-LNSPGIGASDVDA 59
D L +LP D+LD+ IL+ L +VRTS LSRAWRRRWES+ + + L G
Sbjct: 30 DMLMALPPDILDDRILALLPFDKLVRTSCLSRAWRRRWESVRNLEIELPRAYSGGGRA-- 87
Query: 60 LLLRRTAPVRSF--RLATRD--------RSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEF 109
L R PVR F R+A RD R+ + D +L +
Sbjct: 88 -LWRCARPVRFFSARVARRDVFRAARWLRALARKGVQD---------------LSLEFSL 131
Query: 110 MYQKL---NSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPG-GRGI 165
++ LFS L L L C +P P F GFPNL+ L V G G +
Sbjct: 132 AGKQRPLPGPALFSCAALVQLDLEQCDMPAAPPGFLGFPNLERLDLVYVTLPFAGAGTQL 191
Query: 166 ATLIAASPVLQEASLIDGKLIGDGPDEDWVIRGSNLRKL--TIALGHKYGGRIE-DIARL 222
LI A+ L +L I G + W IR LRKL T+ +G G RI + L
Sbjct: 192 EHLIVAAEKLAVLNLSPVITINGGGVDTWAIRAPKLRKLYITMEMGDDNGCRIPMPLPML 251
Query: 223 EECC-----LFGP-NYAKYLMRMAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLG 276
EE LFG ++ ++ V KL F + +++LE + FENLR L
Sbjct: 252 EEVTISFDRLFGTQDFLDAFQNISTVNKLFFKSDKF---NINMLEGITCKFENLREGGLI 308
Query: 277 VNFCILSHILATFCLLRSAPVLEELDVWVFSDGT-------------QEMKTDDEF---- 319
++F S +L+ LL+ AP +E L ++ +D + + ++DEF
Sbjct: 309 IDFGQRSSVLSLVSLLKFAPHIEHL--YIRTDHSILDPVSSEDEMDEDSLNSEDEFDEDS 366
Query: 320 -----------FDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKARALRVLSLTLA 368
+++ + + A L V + + N+M ++ +LSKAR+L+ +T
Sbjct: 367 LNSQDEIDEDSLNSEISSDLLASLKYVTLINMKYNSNQMCFMKLLLSKARSLQTFDVTFV 426
Query: 369 ----SNSQFSIEEAITDITEYPRASPYAQVIFAGR 399
SN ++ A ++TE +ASP QV+ +
Sbjct: 427 YSYESNGRYG--NACRELTECQKASP--QVVLTAK 457
>Os08g0461700 Conserved hypothetical protein
Length = 256
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 13/223 (5%)
Query: 187 GDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCL------FGPNYAKYLMRMA 240
G+ DE WVIR NL+ LTI + Y R+E++ L+ + ++ + L A
Sbjct: 34 GNQMDE-WVIRAPNLKHLTIESDYDYLWRVEELPSLQTATVKVDDDSTDRDFVQLLTCFA 92
Query: 241 HVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCILSHILATFCLLRSAPVLEE 300
V+ L + +L+TE + L+ L E L+SL L NF +S IL F LL P +
Sbjct: 93 QVSMLELH---LLATEDNALDGLSCSLEKLKSLTLHANFRSVSSILCIFSLLMRCPNIGV 149
Query: 301 LDVWVF-SDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVSCLCNEMLLIEFILSKARA 359
LD+ + S+ Q + D EFF+ N +F L + ++ CL N+M IEF+LS+ R
Sbjct: 150 LDIEIMGSEFPQNDEIDAEFFNTLETNDLFTNLDDITLRNAPCLSNDMHFIEFVLSRVRL 209
Query: 360 LRVLSLTLASNSQFSI--EEAITDITEYPRASPYAQVIFAGRE 400
L + ++ S EEA+ +I +Y RASP ++V F E
Sbjct: 210 LSKFWVFRDDSNSLSKPSEEAVIEIAKYRRASPKSRVFFRSME 252
>Os09g0443100
Length = 412
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 178/412 (43%), Gaps = 40/412 (9%)
Query: 7 LPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLL---------------NSPG 51
LP ++ D IL+RL + D R+S LS +W R W L + + +
Sbjct: 10 LPWELQDAILARLPLRDAARSSVLSSSWGRSWRHLGELDFVSSPPPAAASLPVAAATAVA 69
Query: 52 IGASDVDALLLRR-TAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYEFM 110
+ +DA+LL + PV+ RL D W L M
Sbjct: 70 CDKAAIDAILLHQHPGPVQRVRLRVTDELL--PGVPAWMASLSEKGIQSL---DLTVRAM 124
Query: 111 YQK----LNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSPGGRGIA 166
Y+ ++ +F+ R L L L LP P FAGFP L TL S+ R +
Sbjct: 125 YRPPPHPMHRSIFACRALRRLSLGRFALPAAPEHFAGFPALATL--SLTGTAFRNARDLE 182
Query: 167 TLIAASPVLQEASL----IDGKLIGDGPDEDWVIR--GSNLRKLTI-ALGHK--YGGRIE 217
L+A SP L+E + +D G D +R S+LR L I +G+ G R+
Sbjct: 183 ALVAMSPRLEELRMCCIAVDVDCREHGGDGRRKVRMVSSSLRFLRIDGMGNVEFVGARLP 242
Query: 218 DIARLEECCLFGPNYAKYLMRMA-HVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLG 276
+++ + P+ L M + L +Y ++ + +L+ LP ++NL+ L +
Sbjct: 243 RVSQADFAQASYPSAPNLLSAMVTSLETLDYYYYALPLSPTKLLKGLPSSYKNLKRLKVH 302
Query: 277 VNFCILSHILATFCLLRSAPVLEELDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVR 336
++F IL+T LR+AP L +L + F+D + A+ ++ L ++
Sbjct: 303 LDFNHAPPILSTLNFLRTAPNLTQLVIQDFTDDSYAQSPYP--LAAELYGNLCPSLLFLQ 360
Query: 337 MKKVSCLCNEMLLIEFILSKARALRVLSLTLASNSQ-FSIEEAITDITEYPR 387
M V+ NEM I ILSKAR L+V+ + + NS+ I+E I + PR
Sbjct: 361 MSYVTSQNNEMDFIRLILSKARMLQVMEVKMRRNSRGIEIKEEICGYDKDPR 412
>Os08g0266900
Length = 368
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 2 DALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTVGLLNSPGIGASDVDALL 61
D L SL ++LD+IL+RL + +VVRT LSR W RRWES + + A V +L
Sbjct: 28 DILLSLLPEILDDILTRLPLKEVVRTCCLSRGWARRWESASGLDVRFRGFYSAGAVAGVL 87
Query: 62 LRRTAPVRSFRLATRDRSWSPTAFHDWXXXXXXXXXXXXXXXTLRYE--FMYQKLNSCLF 119
R APV SF + R R A+ + R + ++ + ++
Sbjct: 88 ARCAAPVASFDIEVRPRLRPRAAYWLRALAEKRVRSLQLAFGSSRADEPGVFPGVGRAIY 147
Query: 120 SFRELTSLKLYCCGLPNLPAE-------FAGFPNLKTLHFSMVQAQSPG-GRGIATLIAA 171
+ EL++L L C LP P FAGFP L L + V+ G G + +IA
Sbjct: 148 ARAELSNLYLRYCELPRPPPPQPGQGSLFAGFPRLTRLALNSVKLPFAGAGALLERVIAG 207
Query: 172 SPVLQEASLID---GKLIGDGPDED------WVIRGSNLRKLTI 206
+P L + L+D G + G + W IR L LT+
Sbjct: 208 APDLADLLLVDVITGVVAGGEKKVEEEEPEAWAIRAPKLHSLTL 251
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,346,414
Number of extensions: 804728
Number of successful extensions: 2620
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 2583
Number of HSP's successfully gapped: 17
Length of query: 584
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 478
Effective length of database: 11,501,117
Effective search space: 5497533926
Effective search space used: 5497533926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)