Os08g0462300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0462300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 199.65 | 0.664 | 6.97 | -1.74 | 2.22 | -0.98 | -1.86 | -4.38 | -0.089 | 4.94 | 24 | 2248 | -- | -- |
| 225.19 | 0.699 | 6.99 | -2.98 | 2.21 | -1.28 | -1.48 | -- | 0.144 | 4.55 | 31.3 | 3999 | -- | -- |
| 207.42 | 0.671 | 6.96 | -1.72 | 2.25 | -0.939 | -- | -4.37 | -0.071 | 4.8 | 24 | 2099 | -- | -- |
| 231.71 | 0.709 | 7 | -3.06 | 2.22 | -1.3 | -- | -- | 0.127 | 4.73 | 31.4 | 4000 | -- | -- |
| 439.88 | 0.977 | 7.03 | -2 | -- | -1.43 | -- | -3.96 | -0.2 | -- | 24 | 2639 | -- | -- |
| 281.65 | 0.787 | 7.05 | -2.8 | 2.29 | -- | -1.63 | -- | -0.113 | 4.69 | -- | -- | -- | -- |
| 288.32 | 0.795 | 7.05 | -2.79 | 2.27 | -- | -- | -- | -0.105 | 4.57 | -- | -- | -- | -- |
| 465.93 | 1.01 | 7.21 | -3.4 | -- | -1.85 | -- | -- | -0.557 | -- | 24.79 | 2672 | -- | -- |
| 472.65 | 1.01 | 6.94 | -- | 2.17 | -0.695 | -- | -- | 0.359 | 4.72 | 31.43 | 2586 | -- | -- |
| 563.65 | 1.11 | 7.07 | -2.7 | -- | -- | -- | -- | -0.0455 | -- | -- | -- | -- | -- |
| 493.66 | 1.04 | 6.98 | -- | 2.22 | -- | -- | -- | 0.206 | 4.6 | -- | -- | -- | -- |
| 717.22 | 1.25 | 6.93 | -- | -- | 0.642 | -- | -- | 0.555 | -- | 24.79 | 2672 | -- | -- |
| 756.45 | 1.28 | 7 | -- | -- | -- | -- | -- | 0.254 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 3 | 193.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 13 |
| 16 | 194.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 22 | 194.50 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 82 | 196.44 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 91 | 196.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 367 | 203.16 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 16 |
| 369 | 203.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 17 |
| 385 | 203.45 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 397 | 203.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 429 | 204.02 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 456 | 204.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 501 | 204.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 550 | 205.29 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 557 | 205.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 624 | 205.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 629 | 205.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 631 | 205.96 | temperature | 25 | 1440 | > th | dose independent | sin | 13 | NA |
| 643 | 206.00 | temperature | 25 | 1440 | < th | dose independent | sin | 13 | NA |
| 736 | 206.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 19 |
| 807 | 206.72 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 913 | 207.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 16 |