Os08g0461000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0461000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.84 | 0.311 | 10.3 | -1.31 | 0.29 | 0.722 | -0.245 | -0.236 | 0.0688 | 7.17 | 22 | 828 | -- | -- |
| 43.99 | 0.309 | 10.3 | -1.24 | 0.29 | 0.722 | -0.141 | -- | 0.086 | 7.05 | 21.92 | 832 | -- | -- |
| 43.96 | 0.309 | 10.3 | -1.3 | 0.291 | 0.723 | -- | -0.184 | 0.0748 | 6.96 | 21.9 | 832 | -- | -- |
| 44.03 | 0.309 | 10.3 | -1.25 | 0.291 | 0.723 | -- | -- | 0.0868 | 6.91 | 21.97 | 832 | -- | -- |
| 47.13 | 0.32 | 10.3 | -1.36 | -- | 0.767 | -- | -0.229 | 0.0685 | -- | 21.75 | 1206 | -- | -- |
| 64.92 | 0.378 | 10.3 | -0.996 | 0.227 | -- | 0.164 | -- | 0.316 | 4.73 | -- | -- | -- | -- |
| 64.98 | 0.377 | 10.3 | -0.996 | 0.229 | -- | -- | -- | 0.315 | 4.99 | -- | -- | -- | -- |
| 47.26 | 0.32 | 10.3 | -1.27 | -- | 0.742 | -- | -- | 0.0836 | -- | 21.96 | 1156 | -- | -- |
| 81.29 | 0.42 | 10.3 | -- | 0.269 | 0.463 | -- | -- | 0.281 | 6.71 | 22.4 | 739 | -- | -- |
| 67.74 | 0.385 | 10.3 | -0.988 | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
| 91.14 | 0.447 | 10.3 | -- | 0.212 | -- | -- | -- | 0.426 | 5.15 | -- | -- | -- | -- |
| 84.21 | 0.427 | 10.3 | -- | -- | 0.43 | -- | -- | 0.298 | -- | 22.37 | 889 | -- | -- |
| 93.49 | 0.451 | 10.3 | -- | -- | -- | -- | -- | 0.431 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 24 | 44.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 57 | 44.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 61 | 44.92 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 71 | 45.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 76 | 45.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 78 | 45.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 88 | 45.28 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 95 | 45.35 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 116 | 45.58 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 133 | 45.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 199 | 45.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 219 | 45.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 229 | 46.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 231 | 46.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 234 | 46.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 558 | 46.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 892 | 47.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 897 | 47.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 927 | 47.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 987 | 47.38 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 20 |