BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0461000 Os08g0461000|AK106852
(279 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13570.1 | chr1:4642528-4643930 REVERSE LENGTH=417 88 4e-18
AT1G06630.1 | chr1:2028071-2031173 FORWARD LENGTH=478 67 1e-11
AT3G58880.1 | chr3:21768485-21770167 REVERSE LENGTH=455 63 1e-10
AT5G44940.1 | chr5:18149369-18150892 FORWARD LENGTH=378 62 4e-10
AT5G44960.1 | chr5:18153852-18155391 FORWARD LENGTH=417 57 1e-08
AT5G44980.1 | chr5:18160600-18162058 FORWARD LENGTH=436 55 3e-08
AT5G03100.1 | chr5:726832-727980 FORWARD LENGTH=308 51 7e-07
AT3G28410.1 | chr3:10640152-10642071 REVERSE LENGTH=466 50 1e-06
AT5G02700.1 | chr5:609381-611679 REVERSE LENGTH=457 50 1e-06
AT5G02930.1 | chr5:682577-684480 FORWARD LENGTH=470 50 1e-06
AT3G26922.1 | chr3:9922858-9923891 FORWARD LENGTH=307 49 3e-06
>AT1G13570.1 | chr1:4642528-4643930 REVERSE LENGTH=417
Length = 416
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXXXXXXXXXXXXQ-- 83
++ LP I+ENI+ RL +R A+RTS LS WR +W + + F +
Sbjct: 8 ISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCVVETN 67
Query: 84 -------ILARYACPVRHFRHGWIESGGSARADEWFVVLAGRGVEHLALIFSEADNFLFH 136
+L + P+ F+ D+W + L+ G++ L L E +
Sbjct: 68 LVRFITGVLLLHQGPIHKFQLSTSFKQCRPDIDQWLLFLSRNGIKELVLKLGEGE----F 123
Query: 137 TLHAAIFSCRELTKLELGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSA 196
+ A +F+C +LT LEL C P F GF L L L + P +E++IS
Sbjct: 124 RVPACLFNCLKLTCLELCHCEF-DPPQYFKGFSYLKSLNLHQILVAP---EVIESLISGC 179
Query: 197 PLLQSLELKNVSMEGGEWDEWV--IRAPNLKDLIIQLEFDFLWEIEQLPSIQTATISVDN 254
PLL+ L L +D V I APNL L + EF ++ +E P + ++S+
Sbjct: 180 PLLEFLSL-------SYFDSLVLSISAPNLMYLYLDGEFKDIF-LENTPKLVAISVSMYM 231
Query: 255 ESTDRDFVQ 263
DF Q
Sbjct: 232 HEDVTDFEQ 240
>AT1G06630.1 | chr1:2028071-2031173 FORWARD LENGTH=478
Length = 477
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 24/230 (10%)
Query: 22 PKPSLNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXXXXXXXXXXX 81
P+ ++N LP EIL I+ L +QAV TS LS+ WR ++ + F
Sbjct: 10 PRDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEAS 69
Query: 82 X------------QILARYACPVRHF----RHGWIESGGSARADEWFVVLAGRGVEHLAL 125
+ + P+R G + A W + GRGV + L
Sbjct: 70 YVFPESFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKACVGRWISNVVGRGVSEVVL 129
Query: 126 IFSEADNFLFHTLHAAIFSCRELTKLELGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHG 185
++ H L + +C+ L KL LG+ + P+L L + V F G
Sbjct: 130 RINDRG---LHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFG 186
Query: 186 ERTLEAMISSAPLLQSLELKNVSMEGGEWDEWVIRAPNLKDLIIQLEFDF 235
E + +++ P++++L L + GE + I +P LK L + E+ F
Sbjct: 187 ELS-NVLLAGCPVVEALYLN----QNGESMPYTISSPTLKRLSVHYEYHF 231
>AT3G58880.1 | chr3:21768485-21770167 REVERSE LENGTH=455
Length = 454
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXX------------- 72
++SLP ++L +I+ L ++A TS LS+ WR P + F
Sbjct: 5 VSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQTREG 64
Query: 73 XXXXXXXXXXQILARYA-CPVRHFRHGWIESGGSARADEWFVVLAGRGVEHLALIFSEAD 131
++LA + P+R F ++W + RGV + L
Sbjct: 65 TRQSFIDFVDRVLALHGDSPIRKFSLKCKTGVDLDLLNQWICNVLQRGVLLIDLSMDLGH 124
Query: 132 NFLFHTLHAAIFSCRELTKLELGS-CRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLE 190
+F IF R L +L+LGS CR+ P S P L LTL V++ G+ LE
Sbjct: 125 RCMF----IEIFMSRTLVELKLGSGCRIAFGPEHISALPMLKTLTLDSVSWSDSGQ--LE 178
Query: 191 AMISSAPLLQSLELKNVSMEGGEWDEWVIRAPNLKDLIIQ 230
++S+ P L++L L NV G + + +LK L I+
Sbjct: 179 RLLSACPALEALNLANVH---GSYPNATVSIASLKTLTIK 215
>AT5G44940.1 | chr5:18149369-18150892 FORWARD LENGTH=378
Length = 377
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIR---FXXXXXXXXXXXXXX 82
++ P +L I+ LP + +V+TS LS+ WR W + PG+R F
Sbjct: 7 ISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDFPVFPYPYEEGFV 66
Query: 83 QILAR---YACPVR--HFRHGWIESGG-SARADEWFVVLAGRGVEHLALIFSEADNFLFH 136
+ + R + C R F + E G R E L RG++HL + + F
Sbjct: 67 RFMDRFMEFKCRSRLQKFMITYFEHNGYRDRLMELIGTLVDRGIQHLYVYMHTCNRVDF- 125
Query: 137 TLHAAIFSCRELTKLELGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSA 196
+ I+ + L L+L + L P P L +L L + G +E +IS
Sbjct: 126 -IRQNIYKSKTLVSLKLYNVEL-KNPEFVVSLPCLKILKLENIFHGEDGPLVVEKLISGC 183
Query: 197 PLLQSLEL 204
P+L+ LEL
Sbjct: 184 PVLEDLEL 191
>AT5G44960.1 | chr5:18153852-18155391 FORWARD LENGTH=417
Length = 416
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 10/186 (5%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIR-FXXXXXXXXXXXXXXQI 84
+N LP +L I+ L + +V+TS S+ WR W + PG+ F +
Sbjct: 7 INELPDSLLTQILLDLRTKDSVKTSVSSKRWRNLWLNVPGLDLFSLQFTNPHHEEGLIKF 66
Query: 85 LARYA---CPVR--HFRHGWIESGG-SARADEWFVVLAGRGVEHLALIFSEADNFLFHTL 138
+ R+ C R F + E G R E + G++HL + + F +
Sbjct: 67 MDRFMESNCRSRLQKFMIRYFECNGYRDRFMELIGTVVDCGIQHLYVYMHTCNRVDF--I 124
Query: 139 HAAIFSCRELTKLELGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSAPL 198
I+ + L L+L + L P P L +L L + + G +E +IS P+
Sbjct: 125 RQNIYKSKTLVSLKLYNVEL-KNPDFVVSLPCLKILKLMKICYGEDGPLVVEKLISGCPV 183
Query: 199 LQSLEL 204
L+ LEL
Sbjct: 184 LEDLEL 189
>AT5G44980.1 | chr5:18160600-18162058 FORWARD LENGTH=436
Length = 435
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 12/187 (6%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIR-FXXXXXXXXXXXXXXQI 84
++ LP +L I+ L + +V+TS LS+ WR W + PG+ F +
Sbjct: 6 ISELPDSLLTQILLELRTKDSVKTSVLSKRWRNLWLNVPGLELFTLQFTYPDREEIFVRF 65
Query: 85 LAR---YAC--PVRHFRHGWIESGG-SARADEWFVVLAGRGVEHLALIFSEADNFLFHTL 138
+ R + C ++ F +++ G R E L G++HL + D F
Sbjct: 66 MDRFMEFKCRSRLKKFMITYVDCKGYRDRLMELIGTLVDHGLQHLYVFMHTFDRVDFK-- 123
Query: 139 HAAIFSCRELTKLELGSCRLPAAPSDF-SGFPNLTVLTLTMVAFPPHGERTLEAMISSAP 197
I+ + L L+L + L SDF P L +L L + G +E +IS
Sbjct: 124 RQNIYKSKTLVSLKLHNVELKN--SDFVVSLPCLKILKLENICHGEDGPLVVEKLISGCS 181
Query: 198 LLQSLEL 204
+L+ LEL
Sbjct: 182 VLEDLEL 188
>AT5G03100.1 | chr5:726832-727980 FORWARD LENGTH=308
Length = 307
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXXXXXXXXXXXXQIL 85
++SLP EIL +I+ P + A+RTS LS+ W+ W +P I + L
Sbjct: 11 ISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVWYETPSISI---VCNRVDPDSLNKTL 67
Query: 86 ARYACP-VRHFRHGWIESGGSARADEWFVVLAGRGVEHLALIFSEA----DNFLFHTLHA 140
+ Y+ P ++ F D W + R E+++L F+ D F ++
Sbjct: 68 SSYSTPKIKSFDVTISRDVTVPEIDTWINLALSRKAENVSLRFTSHYRFRDTFFINS--- 124
Query: 141 AIFSCRELTKLELGSCRL-PAAPSDFSGFPNLTV----LTLTMVAFPPHGERTLEAM--- 192
S ++L+ L L C L P +S NL++ ++ +A G LE++
Sbjct: 125 ---SLKQLS-LTLVYCILNPKCVVSWSSLRNLSLNRCKVSDDSIAKILTGCSLLESLTLN 180
Query: 193 ----ISSAPLLQSLELKNVSMEGGEWDEWVIRAPNLKDL 227
++ L +SL L+ + + G W I AP+++ L
Sbjct: 181 LCDRLNDLDLSKSLSLRRLEILGDRWTPERIVAPHIRYL 219
>AT3G28410.1 | chr3:10640152-10642071 REVERSE LENGTH=466
Length = 465
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXXXXXXXXXXXXQIL 85
+N +P +IL +I+ +P A+RTS LSR WR W +P + Q L
Sbjct: 30 INYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDI------KLKHGETNQTL 83
Query: 86 ARYACP-VRHFRHGW-IESGGSARADEWFVVLAGRGVEHLALIFSEADNFLFHTLHAAIF 143
Y P + F+ + + D W R V++L++ + + +
Sbjct: 84 TSYTAPIITSFKLVMDLNDNTVPQVDSWIEFALSRNVQNLSVFVRDFTYTKTYRFPDIFY 143
Query: 144 SCRELTKLELGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSAPLLQSLE 203
L +L++ P+ + +L LTL P + ++ ++S P+L+SL
Sbjct: 144 ISSSLKQLDVTLDFFDMIPTCAVSWKSLRNLTLRFCQIP---DESMHNILSGCPILESLT 200
Query: 204 LKNVS-MEGGEWDEWVIRAPNLKDLIIQLEF 233
L +E + ++PNL+ L I ++
Sbjct: 201 LDTCRLLERLDLS----KSPNLRRLDINRQY 227
>AT5G02700.1 | chr5:609381-611679 REVERSE LENGTH=457
Length = 456
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXXXXXXXXXXXXQIL 85
+N +P +IL +I+ +P A+RTS LSR WR W +P + Q L
Sbjct: 29 INYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDI------TLKHGAMNQTL 82
Query: 86 ARYACP-VRHFRHGW-IESGGSARADEWFVVLAGRGVEHLALI---FSEADNFLFHTLHA 140
Y P + F+ + S + D W R V++L++ F+ + + F +
Sbjct: 83 TSYTAPIITSFKLVMDLNSNTVPQVDSWIEFALSRNVQNLSVFVRDFTYSKTYRFPDI-- 140
Query: 141 AIFSCRELTKLELGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSAPLLQ 200
+ L L++ P+ + +L LTL P + ++ ++S P+L+
Sbjct: 141 -FYLSSSLKLLDVTLDFFDMIPTCTVSWKSLRNLTLRFCQIP---DESIHNILSGCPILE 196
Query: 201 SLELKNVS-MEGGEWDEWVIRAPNLKDLIIQLEF 233
SL L +E + ++PNL+ L I ++
Sbjct: 197 SLTLDTCRLLERLDLS----KSPNLRRLDINQQY 226
>AT5G02930.1 | chr5:682577-684480 FORWARD LENGTH=470
Length = 469
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 25 SLNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXXXXXXXXXXXXQI 84
S++ LP +L++I +P A+RTS LS+ WR W +P + F +
Sbjct: 29 SISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSF---EWLKVSPKLINKT 85
Query: 85 LARY-ACPVRHF----RHGWIESGGSARADEWFVVLAGRGVEHLALIFSEADNFLFHTLH 139
LA Y A ++ F R+ + + F + V+ L+L F F+
Sbjct: 86 LASYTASKIKSFHLCTRYSYEADTHHVNSSIEFAM--SHNVDDLSLAFRRCSP--FYNFD 141
Query: 140 AAIFSCRELTKLELGSCRL-PAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSAPL 198
++ L ++EL L P ++ NL++ TM + + ++S P+
Sbjct: 142 DCFYTNSSLKRVELRYVDLMPRCMVSWTSLKNLSLTDCTM------SDESFLEILSGCPI 195
Query: 199 LQSLELK 205
L+SL LK
Sbjct: 196 LESLSLK 202
>AT3G26922.1 | chr3:9922858-9923891 FORWARD LENGTH=307
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 105/280 (37%), Gaps = 43/280 (15%)
Query: 26 LNSLPSEILENIVGRLPVRQAVRTSALSRDWRRRWESSPGIRFXXXXXXX---XXXXXXX 82
++ LP +L I+ LPV+ V TS LS+ WR W+ P ++F
Sbjct: 16 ISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQSEDETYSEIVC 75
Query: 83 QILARYACPVRHFRHGWIESGG--SARADEWFVVLAGRGVEHLAL-IFSEADNFLFHTLH 139
++L P H G S W + R V L L + S +F+F T
Sbjct: 76 RLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLHVESVKGSFIFPT-- 133
Query: 140 AAIFSCRELTKLELGSCRLPAAPS---------------DF----------SGFPNLTVL 174
+++C L L L S L PS D+ SG PNL L
Sbjct: 134 -GLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYKYDDSVYNLLSGCPNLENL 192
Query: 175 TLTMVAFPPHGERTLEAMISSAPLLQSLELKNVSMEGGEWDEWVIRAPNLKDLIIQLEFD 234
+ +E + P LQ L + + +G +VI AP+LK L I F
Sbjct: 193 VVYRGNL-----LEVETFTIAVPSLQRLTIYD-DNDGEYCTGYVINAPSLKYLKID-GFK 245
Query: 235 FLWE--IEQLPSIQTATISVDNESTDRDFVQLLTCFARPS 272
L IE P + ATI ++ + ++ LT R S
Sbjct: 246 ALESCLIENAPELVEATIMNVSKIINEKLLETLTSVKRLS 285
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,569,389
Number of extensions: 205649
Number of successful extensions: 947
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 955
Number of HSP's successfully gapped: 11
Length of query: 279
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 182
Effective length of database: 8,447,217
Effective search space: 1537393494
Effective search space used: 1537393494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)