Os09g0443000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0443000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.36 | 0.496 | 2.97 | 0.16 | 0.0303 | 11.6 | -0.684 | 23.3 | -0.0169 | 7.06 | 1015 | 1522 | -- | -- |
| 121.91 | 0.514 | 2.89 | 0.0252 | 0.0308 | 0.265 | -0.5 | -- | -0.0154 | 5.2 | 1010 | 2342 | -- | -- |
| 111.61 | 0.492 | 2.98 | 0.133 | 0.044 | 11.4 | -- | 22.8 | -0.0135 | 8.72 | 1016 | 1551 | -- | -- |
| 121.31 | 0.513 | 2.89 | 0.0239 | 0.0337 | 0.722 | -- | -- | -0.0122 | 5.88 | 1013 | 1594 | -- | -- |
| 111.41 | 0.492 | 2.98 | 0.213 | -- | 12.8 | -- | 25.7 | 0.0144 | -- | 1016 | 1563 | -- | -- |
| 122.49 | 0.519 | 2.89 | -0.00405 | 0.0511 | -- | -0.55 | -- | -0.0321 | 7.1 | -- | -- | -- | -- |
| 123.08 | 0.52 | 2.89 | -0.0127 | 0.0738 | -- | -- | -- | -0.0297 | 10.5 | -- | -- | -- | -- |
| 121.35 | 0.513 | 2.89 | 0.0235 | -- | 0.717 | -- | -- | -0.011 | -- | 1013 | 1600 | -- | -- |
| 121.19 | 0.513 | 2.89 | -- | 0.0489 | 0.621 | -- | -- | -0.0302 | 9.41 | 1013 | 1624 | -- | -- |
| 123.41 | 0.519 | 2.89 | -0.014 | -- | -- | -- | -- | -0.03 | -- | -- | -- | -- | -- |
| 123.08 | 0.519 | 2.89 | -- | 0.0739 | -- | -- | -- | -0.0283 | 10.5 | -- | -- | -- | -- |
| 121.37 | 0.513 | 2.89 | -- | -- | 0.709 | -- | -- | -0.0137 | -- | 1013 | 1601 | -- | -- |
| 123.42 | 0.519 | 2.89 | -- | -- | -- | -- | -- | -0.0284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.94 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 2 | 95.97 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 8 | 96.16 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 27 | 96.23 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 54 | 96.23 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 82 | 96.25 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 112 | 96.26 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 302 | 96.37 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 318 | 96.47 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 319 | 96.50 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 3 |
| 323 | 96.53 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 324 | 96.56 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 377 | 97.00 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 10 |
| 423 | 97.46 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 680 | 100.92 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 791 | 102.11 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 1 |
| 835 | 102.23 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 859 | 102.59 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |
| 949 | 103.60 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |