Os08g0461700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0461700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.13 | 0.461 | 6.01 | -0.724 | 0.22 | 0.929 | -0.781 | 0.135 | 0.122 | 7.18 | 22 | 1033 | -- | -- |
| 96.19 | 0.457 | 6.01 | -0.76 | 0.218 | 0.925 | -0.795 | -- | 0.114 | 7.17 | 22 | 1037 | -- | -- |
| 97.66 | 0.46 | 6 | -0.695 | 0.23 | 0.932 | -- | 0.275 | 0.131 | 7.62 | 22.04 | 998 | -- | -- |
| 97.88 | 0.461 | 6.01 | -0.784 | 0.22 | 0.932 | -- | -- | 0.112 | 7.53 | 22.04 | 1033 | -- | -- |
| 99.63 | 0.465 | 6.01 | -0.717 | -- | 0.944 | -- | 0.224 | 0.128 | -- | 22 | 1160 | -- | -- |
| 130.1 | 0.535 | 5.95 | -0.445 | 0.194 | -- | -0.832 | -- | 0.412 | 5.91 | -- | -- | -- | -- |
| 131.63 | 0.537 | 5.95 | -0.453 | 0.197 | -- | -- | -- | 0.414 | 4.89 | -- | -- | -- | -- |
| 99.75 | 0.465 | 6.02 | -0.79 | -- | 0.947 | -- | -- | 0.11 | -- | 22 | 1167 | -- | -- |
| 112.17 | 0.493 | 5.98 | -- | 0.229 | 0.728 | -- | -- | 0.241 | 7.46 | 22.38 | 938 | -- | -- |
| 133.67 | 0.54 | 5.95 | -0.446 | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
| 137.04 | 0.548 | 5.93 | -- | 0.188 | -- | -- | -- | 0.465 | 4.96 | -- | -- | -- | -- |
| 114.12 | 0.498 | 5.99 | -- | -- | 0.739 | -- | -- | 0.241 | -- | 22.33 | 1166 | -- | -- |
| 138.91 | 0.55 | 5.94 | -- | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 5 | 96.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 7 | 96.29 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 14 | 96.48 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 39 | 97.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 52 | 97.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 56 | 97.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 58 | 97.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 66 | 97.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 125 | 97.66 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 8 |
| 139 | 97.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 8 |
| 606 | 99.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 725 | 99.34 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 900 | 99.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 923 | 99.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |