Os08g0460800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0460800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.43 | 0.291 | 9.34 | 0.772 | 0.896 | -1.22 | -0.0333 | 2.62 | 0.258 | 5.17 | 21.05 | 1580 | -- | -- |
| 42.24 | 0.303 | 9.42 | 0.357 | 0.979 | -1.25 | -0.0933 | -- | 0.149 | 5.21 | 16.35 | 8781 | -- | -- |
| 38.43 | 0.289 | 9.34 | 0.768 | 0.898 | -1.22 | -- | 2.62 | 0.257 | 5.16 | 21.1 | 1578 | -- | -- |
| 40.3 | 0.296 | 9.39 | 0.441 | 0.931 | -1.59 | -- | -- | 0.261 | 5.18 | 11.08 | 8931 | -- | -- |
| 64.39 | 0.376 | 9.42 | 0.194 | -- | -1.62 | -- | 1.88 | 0.125 | -- | 22.2 | 1858 | -- | -- |
| 79.89 | 0.419 | 9.49 | -0.41 | 0.91 | -- | -0.103 | -- | -0.213 | 5.3 | -- | -- | -- | -- |
| 79.92 | 0.419 | 9.49 | -0.41 | 0.909 | -- | -- | -- | -0.213 | 5.3 | -- | -- | -- | -- |
| 48.58 | 0.325 | 9.45 | -0.011 | -- | -1.82 | -- | -- | 0.0876 | -- | 18.03 | 324 | -- | -- |
| 42.82 | 0.305 | 9.42 | -- | 0.936 | -1.33 | -- | -- | 0.115 | 5.18 | 8.002 | 7379 | -- | -- |
| 123.03 | 0.518 | 9.51 | -0.379 | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
| 84.35 | 0.43 | 9.48 | -- | 0.902 | -- | -- | -- | -0.167 | 5.31 | -- | -- | -- | -- |
| 48.5 | 0.324 | 9.44 | -- | -- | -1.86 | -- | -- | 0.103 | -- | 18 | 318 | -- | -- |
| 126.82 | 0.526 | 9.5 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 11 | 37.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 13 | 37.41 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 29 | 37.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 30 | 37.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 37 | 38.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 38 | 38.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 45 | 38.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 51 | 38.25 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 56 | 38.28 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 63 | 38.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 67 | 38.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 179 | 38.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 237 | 38.84 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 259 | 38.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 279 | 38.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 292 | 39.02 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 326 | 39.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 348 | 39.36 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 350 | 39.37 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 8 |
| 353 | 39.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 3 |
| 360 | 39.40 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 379 | 39.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 403 | 39.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 11 |
| 413 | 39.58 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 507 | 39.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 513 | 39.73 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 590 | 39.88 | temperature | 10 | 4320 | > th | dose dependent | sin | 23 | NA |
| 694 | 40.04 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 705 | 40.06 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 821 | 40.22 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 1 |