Os08g0460900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0460900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.11 | 0.294 | 9.89 | 0.916 | 0.57 | -0.847 | 0.454 | 1.66 | 0.236 | 19.5 | 22.96 | 1348 | -- | -- |
| 41.73 | 0.301 | 9.94 | 0.515 | 0.572 | -0.698 | 0.589 | -- | 0.111 | 19.2 | 22.01 | 5657 | -- | -- |
| 39.63 | 0.293 | 9.89 | 0.909 | 0.573 | -0.867 | -- | 1.68 | 0.243 | 19.7 | 22.81 | 1304 | -- | -- |
| 42.35 | 0.303 | 9.95 | 0.476 | 0.573 | -0.712 | -- | -- | 0.103 | 19.4 | 22.4 | 5625 | -- | -- |
| 57.05 | 0.352 | 9.88 | 0.874 | -- | -0.844 | -- | 1.54 | 0.22 | -- | 22.94 | 1372 | -- | -- |
| 58.62 | 0.359 | 9.99 | 0.174 | 0.588 | -- | 0.561 | -- | -0.0501 | 19 | -- | -- | -- | -- |
| 59.43 | 0.361 | 9.99 | 0.163 | 0.589 | -- | -- | -- | -0.049 | 19 | -- | -- | -- | -- |
| 58.62 | 0.357 | 9.94 | 0.408 | -- | -0.711 | -- | -- | 0.0956 | -- | 22.78 | 1374 | -- | -- |
| 46.9 | 0.319 | 9.99 | -- | 0.512 | -0.516 | -- | -- | -0.0189 | 19.3 | 26 | 5682 | -- | -- |
| 77.67 | 0.412 | 9.97 | 0.152 | -- | -- | -- | -- | -0.0597 | -- | -- | -- | -- | -- |
| 60.13 | 0.363 | 9.99 | -- | 0.587 | -- | -- | -- | -0.0672 | 19.1 | -- | -- | -- | -- |
| 62.65 | 0.369 | 9.95 | -- | -- | -0.62 | -- | -- | 0.0384 | -- | 22.6 | 1366 | -- | -- |
| 78.28 | 0.413 | 9.98 | -- | -- | -- | -- | -- | -0.0765 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 48 | 38.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 54 | 38.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 116 | 39.08 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 216 | 39.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 347 | 39.86 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 352 | 39.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 446 | 40.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 492 | 40.29 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 512 | 40.35 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 588 | 40.53 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 662 | 40.69 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 741 | 40.85 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 766 | 40.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 777 | 40.91 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 793 | 40.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 852 | 41.01 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 968 | 41.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 993 | 41.18 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 11 |