Os08g0267800 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0267800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	4.88	(0.0362)	R²	:	0.814
β₁	:	0.91	(0.133)	R²_dD	:	0.0196	R²_D	:	0.0187
β₂	:	3.08	(0.0886)	R²_dC	:	0.52	R²_C	:	0.628
β₃	:	-2.46	(0.143)	R²_dE	:	0.128	R²_E	:	0.238
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.595	(0.0773)	R²_dN8	:	0.0324	R²_N8	:	0.0355
σ	:	0.677
deviance	:	211.13
__

_____

C
peak time of C	:	13.1
E
wheather	:	radiation
threshold	:	8.23
memory length	:	143
response mode	:	< th
dose dependency	:	dose dependent
G
type of G	:	sin
peak or start time of G	:	19.5
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
210.16	0.681	4.88	0.9	3.07	-2.44	-0.212	-0.96	-0.594	13.1	8.57	133	19.5	--
211.13	0.677	4.88	0.9	3.09	-2.44	-0.111	--	-0.596	13	8.829	139	19.6	--
210.05	0.675	4.88	0.893	3.06	-2.44	--	-0.921	-0.593	13	8.4	139	19.6	--
211.13	0.677	4.88	0.91	3.08	-2.46	--	--	-0.595	13.1	8.23	143	19.5	--
316.04	0.828	4.91	1.01	--	-3.31	--	-0.273	-0.586	--	16.82	129	4.14	--
322.25	0.842	4.88	0.901	3.53	--	0.344	--	-0.56	13.8	--	--	--	--
322.71	0.841	4.88	0.911	3.53	--	--	--	-0.559	13.8	--	--	--	--
307.1	0.816	4.91	0.901	--	-3.37	--	--	-0.595	--	36.1	112	4.56	--
232.09	0.71	4.89	--	3.08	-2.41	--	--	-0.668	13.2	6.878	149	19.4	--
1078.64	1.53	4.92	0.766	--	--	--	--	-0.639	--	--	--	--	--
344.6	0.868	4.9	--	3.52	--	--	--	-0.66	13.8	--	--	--	--
328.6	0.844	4.93	--	--	-3.36	--	--	-0.69	--	37.59	106	4.53	--
1094.13	1.54	4.94	--	--	--	--	--	-0.724	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	212.14	radiation	30.0	90	< th	dose dependent	rect.	3	6
2	212.83	radiation	10.0	90	< th	dose independent	rect.	3	7
4	213.43	radiation	40.0	270	< th	dose dependent	rect.	15	15
6	213.65	radiation	20.0	270	< th	dose independent	rect.	15	15
8	214.46	precipitation	0.1	90	< th	dose independent	rect.	7	20
9	214.46	precipitation	0.1	90	< th	dose dependent	rect.	7	20
13	215.12	radiation	10.0	270	< th	dose dependent	rect.	1	17
16	215.32	precipitation	0.1	270	< th	dose independent	rect.	1	5
17	215.32	precipitation	0.1	270	< th	dose dependent	rect.	1	5
18	215.45	radiation	20.0	90	< th	dose dependent	rect.	3	11
19	215.59	radiation	20.0	90	< th	dose dependent	rect.	3	18
24	215.99	radiation	10.0	270	< th	dose independent	rect.	1	6
28	216.41	radiation	10.0	90	< th	dose independent	rect.	3	18
30	216.43	radiation	10.0	270	< th	dose dependent	rect.	1	6
31	216.62	precipitation	0.1	90	< th	dose independent	rect.	3	4
32	216.62	precipitation	0.1	90	< th	dose dependent	rect.	3	4
33	216.74	atmosphere	1010.0	270	< th	dose independent	rect.	1	5
34	216.75	radiation	20.0	90	< th	dose dependent	rect.	3	14
36	216.83	temperature	10.0	270	> th	dose independent	rect.	1	5
38	216.83	temperature	30.0	270	< th	dose independent	rect.	1	5
39	216.83	humidity	50.0	270	> th	dose independent	rect.	1	5
42	216.83	atmosphere	995.0	270	> th	dose independent	rect.	1	5
47	216.83	temperature	10.0	270	> th	dose independent	rect.	6	19
48	216.84	wind	9.0	270	< th	dose independent	rect.	1	5
49	216.89	radiation	10.0	90	< th	dose dependent	sin	1	NA
52	217.02	radiation	40.0	270	< th	dose dependent	rect.	1	5
53	217.07	radiation	10.0	90	< th	dose independent	rect.	3	11
58	217.37	humidity	70.0	90	> th	dose independent	rect.	3	4
59	217.41	wind	9.0	270	< th	dose independent	rect.	6	19
67	218.05	wind	7.0	90	< th	dose independent	rect.	3	4
69	218.05	temperature	10.0	90	> th	dose independent	rect.	3	4
71	218.05	temperature	30.0	90	< th	dose independent	rect.	3	4
72	218.05	humidity	50.0	90	> th	dose independent	rect.	3	4
74	218.05	atmosphere	995.0	90	> th	dose independent	rect.	3	4
75	218.05	atmosphere	1015.0	90	< th	dose independent	rect.	3	4
81	218.23	precipitation	0.1	270	< th	dose independent	rect.	3	2
82	218.23	precipitation	0.1	270	< th	dose dependent	rect.	3	2
96	219.29	radiation	10.0	270	< th	dose dependent	rect.	1	13
110	219.39	wind	9.0	90	< th	dose dependent	rect.	7	20
113	219.66	wind	9.0	270	< th	dose independent	rect.	3	2
114	219.66	temperature	10.0	270	> th	dose independent	rect.	3	2
116	219.66	temperature	30.0	270	< th	dose independent	rect.	3	2
117	219.66	humidity	50.0	270	> th	dose independent	rect.	3	2
120	219.66	atmosphere	995.0	270	> th	dose independent	rect.	3	2
121	219.66	atmosphere	1010.0	270	< th	dose independent	rect.	3	2
123	219.66	radiation	1.0	270	< th	dose independent	rect.	3	2
128	219.66	temperature	10.0	270	> th	dose independent	rect.	5	22
129	219.68	radiation	30.0	270	< th	dose dependent	rect.	3	2
134	219.76	radiation	10.0	90	< th	dose independent	rect.	3	14
140	219.92	radiation	10.0	10	< th	dose independent	rect.	4	17
148	220.37	wind	9.0	90	< th	dose dependent	rect.	3	4
158	220.94	humidity	50.0	90	> th	dose dependent	rect.	3	4
162	221.18	wind	9.0	270	< th	dose independent	rect.	5	22
165	221.46	humidity	50.0	270	> th	dose dependent	rect.	1	5
167	221.57	precipitation	0.1	270	< th	dose independent	rect.	6	9
169	221.57	precipitation	0.1	270	< th	dose dependent	rect.	6	9
171	221.62	radiation	30.0	90	< th	dose dependent	rect.	13	20
175	221.76	radiation	20.0	10	< th	dose dependent	rect.	3	23
193	222.29	temperature	10.0	90	> th	dose dependent	rect.	7	20
197	222.39	temperature	10.0	270	> th	dose independent	rect.	6	9
198	222.39	atmosphere	1015.0	270	< th	dose independent	rect.	6	9
199	222.39	temperature	10.0	270	> th	dose independent	rect.	15	15
202	222.45	precipitation	0.1	270	< th	dose independent	rect.	5	22
203	222.45	precipitation	0.1	270	< th	dose dependent	rect.	5	22
208	222.52	humidity	50.0	270	> th	dose dependent	rect.	3	2
221	222.96	wind	9.0	270	< th	dose independent	rect.	15	15
250	223.22	wind	9.0	270	< th	dose independent	rect.	6	9
281	223.94	wind	1.0	270	> th	dose independent	rect.	1	5
291	224.14	radiation	20.0	10	< th	dose dependent	rect.	4	17
328	224.85	atmosphere	995.0	270	> th	dose independent	rect.	6	9
332	224.93	wind	9.0	270	< th	dose dependent	rect.	3	2
335	225.00	atmosphere	995.0	270	> th	dose independent	rect.	15	15
346	225.33	humidity	50.0	10	> th	dose dependent	rect.	3	18
349	225.41	humidity	50.0	90	> th	dose dependent	rect.	3	17
350	225.45	radiation	10.0	10	< th	dose independent	rect.	3	23
358	225.65	radiation	10.0	10	< th	dose independent	rect.	3	11
360	225.72	wind	9.0	270	< th	dose dependent	rect.	1	5
372	226.05	humidity	70.0	10	> th	dose independent	rect.	3	5
377	226.15	temperature	10.0	270	> th	dose dependent	rect.	2	4
410	226.83	humidity	50.0	270	> th	dose independent	rect.	14	16
426	227.27	precipitation	0.1	270	< th	dose independent	rect.	15	15
427	227.27	precipitation	0.1	270	< th	dose dependent	rect.	15	15
446	227.48	temperature	10.0	270	> th	dose dependent	rect.	3	2
474	228.09	radiation	1.0	270	> th	dose independent	sin	3	NA
542	229.49	radiation	1.0	270	< th	dose independent	sin	3	NA
545	229.53	temperature	30.0	90	< th	dose dependent	rect.	3	4
560	229.65	precipitation	0.1	10	< th	dose independent	rect.	8	19
561	229.65	precipitation	0.1	10	< th	dose dependent	rect.	8	19
570	229.90	precipitation	0.1	10	< th	dose independent	rect.	3	5
571	229.90	precipitation	0.1	10	< th	dose dependent	rect.	3	5
573	230.03	radiation	1.0	270	> th	dose independent	rect.	6	9
577	230.07	temperature	10.0	90	> th	dose dependent	rect.	21	6
613	230.36	atmosphere	1015.0	270	< th	dose independent	rect.	6	19
626	230.53	atmosphere	1015.0	90	< th	dose dependent	rect.	3	4
630	230.58	humidity	50.0	90	> th	dose dependent	rect.	21	6
721	231.83	wind	7.0	10	< th	dose independent	rect.	3	5
734	232.01	temperature	10.0	10	> th	dose independent	rect.	3	5
736	232.01	temperature	30.0	10	< th	dose independent	rect.	3	5
737	232.01	humidity	50.0	10	> th	dose independent	rect.	3	5
739	232.01	atmosphere	995.0	10	> th	dose independent	rect.	3	5
740	232.01	atmosphere	1015.0	10	< th	dose independent	rect.	3	5
741	232.01	temperature	10.0	10	> th	dose independent	rect.	8	19
743	232.04	atmosphere	995.0	270	> th	dose independent	rect.	6	19
779	232.39	wind	9.0	10	< th	dose independent	rect.	8	19
786	232.44	humidity	50.0	270	> th	dose independent	rect.	6	8
799	232.59	temperature	10.0	270	> th	dose dependent	rect.	19	6
803	232.62	temperature	10.0	90	> th	dose independent	rect.	21	6
804	232.62	temperature	30.0	90	< th	dose independent	rect.	21	6
805	232.62	humidity	50.0	90	> th	dose independent	rect.	21	6
808	232.62	atmosphere	995.0	90	> th	dose independent	rect.	21	6
809	232.62	radiation	1.0	90	< th	dose independent	rect.	21	6
814	232.62	temperature	10.0	90	> th	dose independent	rect.	3	18
815	232.62	atmosphere	1015.0	90	< th	dose independent	rect.	3	18
816	232.62	wind	9.0	10	< th	dose dependent	rect.	3	5
817	232.62	radiation	1.0	90	< th	dose dependent	rect.	21	6
856	232.95	wind	9.0	90	< th	dose independent	rect.	21	6
865	233.05	precipitation	0.1	90	< th	dose independent	rect.	21	6
866	233.05	precipitation	0.1	90	< th	dose dependent	rect.	21	6
917	233.57	wind	9.0	90	< th	dose independent	rect.	3	18
918	233.57	atmosphere	995.0	90	> th	dose independent	rect.	3	18
928	233.68	wind	9.0	90	< th	dose dependent	rect.	21	6
988	234.38	wind	1.0	270	> th	dose independent	rect.	3	1