BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0137200 Os08g0137200|AK065561
(443 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0137200 Actin/actin-like family protein 811 0.0
AK059967 268 5e-72
Os03g0836000 Similar to Actin 7 (Actin 2) 262 3e-70
Os10g0510000 actin [Oryza sativa (japonica cultivar-group)] 257 1e-68
Os11g0163100 Similar to Actin 7 (Actin 2) 256 2e-68
Os05g0106600 Similar to Actin 97 256 2e-68
Os03g0718100 Actin 1 253 2e-67
Os05g0438800 Similar to Actin 1 243 2e-64
Os12g0163700 Similar to Actin 7 (Actin 2) 231 8e-61
Os12g0641000 Similar to Actin 1 163 2e-40
Os08g0369300 Similar to ARP2 (Actin-related protein 2) 127 2e-29
Os01g0964400 Similar to Actin 7 (Actin 2) 125 5e-29
Os02g0596900 Actin/actin-like family protein 117 2e-26
Os01g0866100 Similar to Actin 4 108 9e-24
AK110272 68 1e-11
>Os08g0137200 Actin/actin-like family protein
Length = 443
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/443 (90%), Positives = 399/443 (90%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGET
Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASD 60
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
NGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR
Sbjct: 61 SKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV
Sbjct: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
Query: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP
Sbjct: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
Query: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTTSYELPDGQ 300
GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTTSYELPDGQ
Sbjct: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTTSYELPDGQ 300
Query: 301 TIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKEXXX 360
TIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKE
Sbjct: 301 TIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLS 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASLGSF 420
SSGNTRVKVLASGNSVERRFSVWIGGSILASLGSF
Sbjct: 361 SILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSF 420
Query: 421 QQMWFSKAEYEEHGVSYIQRKCP 443
QQMWFSKAEYEEHGVSYIQRKCP
Sbjct: 421 QQMWFSKAEYEEHGVSYIQRKCP 443
>AK059967
Length = 375
Score = 268 bits (685), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 219/442 (49%), Gaps = 72/442 (16%)
Query: 4 GDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXXXXN 63
GDEV A+VID G+ CKAG+AGDD P+AVFPS+VG TG
Sbjct: 2 GDEVQALVIDNGTGMCKAGFAGDDAPRAVFPSIVGRPRHTG------------------- 42
Query: 64 GAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLI 123
V ++ YVG E + +R + + P++ G VT+WD ++ IW+H F L +
Sbjct: 43 ------VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 96
Query: 124 NPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSG 183
PEEHP+L+ E N REK ++MFE + PA+++A AVL+ +ASGR T +V+DSG
Sbjct: 97 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 156
Query: 184 GGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGPGEY 243
G T +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 157 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------YSFT--------- 201
Query: 244 KVVDLDLPNTTESYKLYCMRAIASDIKESVCRVP---DTAFDEVAYANVPTTSYELPDGQ 300
T E R I DIKE +C V + A ++ SYELPDGQ
Sbjct: 202 --------TTAE-------REIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYELPDGQ 246
Query: 301 TIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKEXXX 360
I +G +RF+ P+ LF PS M G+ +S+ +CDVDIRK+
Sbjct: 247 VITIGNERFRAPEALFQPSFL-----------GMESAGIHETTYNSIMKCDVDIRKDLYG 295
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASLGSF 420
+ ++K++A ER++SVWIGGSILASL +F
Sbjct: 296 NVVLSGGTTMFPGIADRMQKELTALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTF 352
Query: 421 QQMWFSKAEYEEHGVSYIQRKC 442
QQMW SK EY+E G S + RKC
Sbjct: 353 QQMWISKEEYDESGPSIVHRKC 374
>Os03g0836000 Similar to Actin 7 (Actin 2)
Length = 377
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 221/445 (49%), Gaps = 72/445 (16%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
M G+++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
V ++ YVG E + +R + + P++ G V +WD ++ IW+H F
Sbjct: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE 95
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
L + PEEHP+L+ E N REK ++MFE + PA+++A AVL+ +ASGR T +V+
Sbjct: 96 LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
DSG G T +++GY L ++ + G LTDC+MK L +G YSF
Sbjct: 156 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERG------YSFT------ 203
Query: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELP 297
T E R I DIKE + + E+ A ++ SYELP
Sbjct: 204 -----------TTAE-------REIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELP 245
Query: 298 DGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKE 357
DGQ I +GA+RF+ P++LF PSL M G+ +S+ +CDVDIRK+
Sbjct: 246 DGQVITIGAERFRCPEVLFQPSLI-----------GMEAPGIHETTYNSIMKCDVDIRKD 294
Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASL 417
+ + ++KV+A ER++SVWIGGSILASL
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASL 351
Query: 418 GSFQQMWFSKAEYEEHGVSYIQRKC 442
+FQQMW SK EY+E G S + RKC
Sbjct: 352 STFQQMWISKGEYDESGPSIVHRKC 376
>Os10g0510000 actin [Oryza sativa (japonica cultivar-group)]
Length = 377
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 223/445 (50%), Gaps = 72/445 (16%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
M +++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
L + PEEHP+L+ E N REK ++MFE + VPA+++A AVL+ +ASGR T +V+
Sbjct: 96 LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
DSG G + +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERG------YSF------- 202
Query: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELP 297
TT + R I DIKE + V E+ A ++ SYELP
Sbjct: 203 ------------TTSAE-----REIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELP 245
Query: 298 DGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKE 357
DGQ I +GA+RF+ P+++F PSL M G+ +S+ +CDVDIRK+
Sbjct: 246 DGQVITIGAERFRCPEVMFQPSLI-----------GMEAPGIHETTYNSIMKCDVDIRKD 294
Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASL 417
+ + ++KV+A ER++SVWIGGSILASL
Sbjct: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASL 351
Query: 418 GSFQQMWFSKAEYEEHGVSYIQRKC 442
+FQQMW S+AEYEE G + + RKC
Sbjct: 352 STFQQMWISRAEYEESGPAIVHRKC 376
>Os11g0163100 Similar to Actin 7 (Actin 2)
Length = 377
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 221/445 (49%), Gaps = 72/445 (16%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
M G+++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
L + PEEHP+L+ E N REK ++MFE + VPA+++A AVL+ +ASGR T +V+
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
DSG G + +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERG------YSFT------ 203
Query: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELP 297
T E R I DIKE + V E+ A ++ SYELP
Sbjct: 204 -----------TTAE-------REIVRDIKEKLAYVALDYEQELEAAKSSSSVEKSYELP 245
Query: 298 DGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKE 357
DGQ I +GA+RF+ P++LF PS M G+ +S+ +CDVDIRK+
Sbjct: 246 DGQVITIGAERFRCPEVLFQPSFI-----------GMEAPGIHETTYNSIMKCDVDIRKD 294
Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASL 417
+ + ++KV+A ER++SVWIGGSILASL
Sbjct: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASL 351
Query: 418 GSFQQMWFSKAEYEEHGVSYIQRKC 442
+FQQMW SK EY+E G + + RKC
Sbjct: 352 STFQQMWISKGEYDESGPAIVHRKC 376
>Os05g0106600 Similar to Actin 97
Length = 377
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 223/445 (50%), Gaps = 72/445 (16%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
M G+++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
L + PEEHP+L+ E N REK ++MFE + VPA+++A AVL+ +ASGR T +V+
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
DSG G + +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERG------YSF------- 202
Query: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELP 297
TT + R I DIKE + V E+ A ++ SYELP
Sbjct: 203 ------------TTSAE-----REIVRDIKEKLAYVALDYEQELETAKNSSSVEKSYELP 245
Query: 298 DGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKE 357
DGQ I +GA+RF+ P++LF PS+ M G+ +S+ +CDVDIRK+
Sbjct: 246 DGQVITIGAERFRCPEVLFQPSMI-----------GMEAAGIHETTYNSIMKCDVDIRKD 294
Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASL 417
+ + ++KV+A ER++SVWIGGSILASL
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASL 351
Query: 418 GSFQQMWFSKAEYEEHGVSYIQRKC 442
+FQQMW SK EY+E G + + RKC
Sbjct: 352 STFQQMWISKDEYDESGPAIVHRKC 376
>Os03g0718100 Actin 1
Length = 377
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 220/445 (49%), Gaps = 72/445 (16%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
M +++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
L + PEEHP+L+ E N REK ++MFE + PA+++A AVL+ +ASGR T +V+
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
Query: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
DSG G + +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------YSFT------ 203
Query: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELP 297
T E R I D+KE + + E+ A ++ SYELP
Sbjct: 204 -----------TTAE-------REIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELP 245
Query: 298 DGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKE 357
DGQ I +GA+RF+ P++LF PS M G+ +S+ +CDVDIRK+
Sbjct: 246 DGQVITIGAERFRCPEVLFQPSFI-----------GMEAAGIHETTYNSIMKCDVDIRKD 294
Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASL 417
+ + ++KV+A ER++SVWIGGSILASL
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASL 351
Query: 418 GSFQQMWFSKAEYEEHGVSYIQRKC 442
+FQQMW +KAEY+E G S + RKC
Sbjct: 352 STFQQMWIAKAEYDESGPSIVHRKC 376
>Os05g0438800 Similar to Actin 1
Length = 376
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 215/441 (48%), Gaps = 72/441 (16%)
Query: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXXXXNG 64
+++ IV D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG-------------------- 43
Query: 65 AKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLIN 124
V ++ YVG E + +R + + P++ G V +WD ++ IW+H F L +
Sbjct: 44 -----VMVGMGQKDAYVGDEAQAKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 98
Query: 125 PEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGG 184
PE+HP+L+ E N REK ++MFE + PA+++A AVL+ +ASGR T +V+DSG
Sbjct: 99 PEDHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 185 GSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGPGEYK 244
G + +++GY L ++ + G LTD +MK L +G YS
Sbjct: 159 GVSHTVPIYEGYTLPHAILRLDLAGRDLTDHLMKILTERG------YS------------ 200
Query: 245 VVDLDLPNTTESYKLYCMRAIASDIKESVCRVP---DTAFDEVAYANVPTTSYELPDGQT 301
L + E R I DIKE + V + + ++ SYE+PDGQ
Sbjct: 201 -----LTTSAE-------REIVRDIKEKLAYVALDYEQELETSRSSSSVEKSYEMPDGQV 248
Query: 302 IEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKEXXXX 361
I +G++RF+ P++LF PSL M G+ +S+ +CDVDIRK+
Sbjct: 249 ITIGSERFRCPEVLFQPSLV-----------GMESPGIHEATYNSIMKCDVDIRKDLYGN 297
Query: 362 XXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQ 421
+ + +VKV+A ER++SVWIGGSILASL +FQ
Sbjct: 298 VVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPP---ERKYSVWIGGSILASLSTFQ 354
Query: 422 QMWFSKAEYEEHGVSYIQRKC 442
QMW SK EY+E G + KC
Sbjct: 355 QMWISKGEYDESGPGIVHMKC 375
>Os12g0163700 Similar to Actin 7 (Actin 2)
Length = 363
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 212/451 (47%), Gaps = 98/451 (21%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
M G+++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
L + PE EK ++MFE + VPA+++A AVL+ +ASGR T +V+
Sbjct: 96 LRVAPE-----------------EKMTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVL 138
Query: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
DSG G + +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 139 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG------YSFT------ 186
Query: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT-------- 292
T E R I DIKE + V A D N
Sbjct: 187 -----------TTAE-------REIVRDIKEKLAYV---ALDYEQELNAAAAAKNSSSVE 225
Query: 293 -SYELPDGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCD 351
SYELPDGQ I +GA+RF+ P++LF PSL M G+ +S+ +CD
Sbjct: 226 KSYELPDGQVITIGAERFRCPEVLFQPSLV-----------GMEAAGIHETTYNSIMKCD 274
Query: 352 VDIRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVERRFSVWIGG 411
VDIRK+ + + ++KV+A ER++SVWIGG
Sbjct: 275 VDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGG 331
Query: 412 SILASLGSFQQMWFSKAEYEEHGVSYIQRKC 442
SILASL +FQQMW SKAEY+E G + + RKC
Sbjct: 332 SILASLSTFQQMWISKAEYDESGPAIVHRKC 362
>Os12g0641000 Similar to Actin 1
Length = 243
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 44/264 (16%)
Query: 97 PMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKV 156
P++ G V +WD ++ IW+H F L + PEEHP+L+ E N REK ++MFE +
Sbjct: 5 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNA 64
Query: 157 PALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCM 216
PA+++A AVL+ +ASGR T +V+DSG G + +++GY L ++ + G LTD +
Sbjct: 65 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 124
Query: 217 MKSLESKGVVIRPRYSFKKKEVGPGEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRV 276
MK L +G YSF T E R I D+KE + +
Sbjct: 125 MKILTERG------YSFT-----------------TTAE-------REIVRDVKEKLSYI 154
Query: 277 PDTAFDEVAYANVPTT---SYELPDGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADS 333
E+A A ++ SYELPDGQ I +GA+RF+ P++LF PS
Sbjct: 155 ALDFDQEMATAATGSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFV-----------G 203
Query: 334 MSVRGLPRMVIDSVNRCDVDIRKE 357
M G+ +S+ +CDVDIRK+
Sbjct: 204 MEAAGIHETTYNSIMKCDVDIRKD 227
>Os08g0369300 Similar to ARP2 (Actin-related protein 2)
Length = 441
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 150/354 (42%), Gaps = 71/354 (20%)
Query: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXXXXNG 64
D + +V D G+ K G+AG++ P +VFP VVG E
Sbjct: 2 DSGNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESL---------------- 45
Query: 65 AKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLIN 124
+ + + VG R ++V P+ +G V WD + +IW+HAF L ++
Sbjct: 46 -------QEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVD 98
Query: 125 PEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGG 184
P E +L+ +P N + REK E MFEKY +F+ AVL+ +A G T LV+DSG
Sbjct: 99 PSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGD 158
Query: 185 GSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGPGEYK 244
G T V V DG+ + G +T ++ L +G ++ K++ + +YK
Sbjct: 159 GVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRG-LLSHFIELKRENMYSYDYK 217
Query: 245 VVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTTSYELPDGQTIEV 304
Y+L I SY LPDG+ I+V
Sbjct: 218 ----------REYQLGLETTIL------------------------VKSYTLPDGRVIKV 243
Query: 305 GADRFKIPDILFNPS----------LSQTIPGV--DGFADSMSVRGLPRMVIDS 346
G +RF+ P+ LF P + Q + V DG AD M+ R + M ID+
Sbjct: 244 GTERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMAD-MAFRCIQEMDIDN 296
>Os01g0964400 Similar to Actin 7 (Actin 2)
Length = 222
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 25/176 (14%)
Query: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXX 60
M G+++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
Query: 61 XXNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
Query: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRAT 176
L + PEEHP+L+ E N REK ++MFE + VPA+++A AVL+ +ASGR T
Sbjct: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
Query: 389 NTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGVSYIQRKC 442
+ ++KV+A ER++SVWIGGSILASL +FQQMW SK EY+E G + + RKC
Sbjct: 171 SMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKC 221
>Os02g0596900 Actin/actin-like family protein
Length = 428
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 183/451 (40%), Gaps = 65/451 (14%)
Query: 9 AIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXXXXNGAKPM 68
A+VID G+ K G+AG+ P + P+VV ++ T G
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV-AVNDTFAGQTRANTTKGNWMAQHSAGVM-A 65
Query: 69 DVDKAKTKRKLYVGQELEFRR---DHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINP 125
D+D ++G++ R + + P+ +G V +WD ++ W L +P
Sbjct: 66 DLD-------FFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDP 118
Query: 126 EEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATS------LV 179
E+H L+ E + RE E+MFE + VP L++A VL + A+G T+ +V
Sbjct: 119 EDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVL-ALAAGYTTTKCEMTGVV 177
Query: 180 VDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVG 239
VD G G+T + V DGYV+ S+ + PI G+ +T + + L+ +G I P SF
Sbjct: 178 VDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESF------ 231
Query: 240 PGEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTTSYELPDG 299
D+ + Y I + + R P+ + P T +
Sbjct: 232 ---------DVARRVKEMYCYTCSDIVKEFNKHD-REPNKYIKHWSGIK-PKTGAKY--- 277
Query: 300 QTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVID-SVNRCDVDIRKEX 358
T ++G +RF P+I F+P + + F + V VID + +D R+
Sbjct: 278 -TCDIGYERFLGPEIFFHPEIYN-----NDFTTPLHV------VIDKCIQSSPIDTRRAL 325
Query: 359 XXXX-----XXXXXXXXXXXXXXXXXXXXXXXSSGNTRVKVLASGNSVE--------RRF 405
+ N R+ A +E +R+
Sbjct: 326 YKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRY 385
Query: 406 SVWIGGSILASLGSFQQMWFSKAEYEEHGVS 436
+VW GGS+LAS F + +KAEYEE+G S
Sbjct: 386 AVWFGGSVLASTAEFYEACHTKAEYEEYGAS 416
>Os01g0866100 Similar to Actin 4
Length = 203
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETXXXXXXXXXXXXXXXXNG 64
+++ IV D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG-------------------- 43
Query: 65 AKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLIN 124
V ++ YVG E + +R + + P++ G V +WD ++ IW+H F L +
Sbjct: 44 -----VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 98
Query: 125 PEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVD--- 181
PEEHP+L+ E N REK ++MFE + PA+++A + + AS + V +
Sbjct: 99 PEEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVA----IQTMASHQGIPNVCNGLL 154
Query: 182 ---SGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDC 215
S G V + + S TS I G L DC
Sbjct: 155 CWVSPGNKDVCPCSLKAFCFEFS--TSRIAG--LNDC 187
>AK110272
Length = 98
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Query: 391 RVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGVSYIQRKC 442
++K++A ER++SVWIGGSILASL +FQQMW SK EY+E G + RKC
Sbjct: 49 KIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 97
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,945,008
Number of extensions: 543992
Number of successful extensions: 1293
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1264
Number of HSP's successfully gapped: 17
Length of query: 443
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 339
Effective length of database: 11,605,545
Effective search space: 3934279755
Effective search space used: 3934279755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)