BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0617500 Os07g0617500|Os07g0617500
(189 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0617500 Plant disease resistance response protein fami... 278 1e-75
Os07g0617100 Plant disease resistance response protein fami... 130 6e-31
Os03g0400200 Plant disease resistance response protein fami... 103 6e-23
Os10g0398100 Plant disease resistance response protein fami... 87 1e-17
Os11g0179400 77 1e-14
Os07g0107300 Plant disease resistance response protein fami... 77 1e-14
Os11g0179100 Plant disease resistance response protein fami... 75 2e-14
Os11g0180000 Plant disease resistance response protein fami... 75 3e-14
Os12g0174700 Plant disease resistance response protein fami... 74 8e-14
Os07g0107500 Plant disease resistance response protein fami... 71 6e-13
Os11g0178800 Plant disease resistance response protein fami... 68 4e-12
Os11g0179000 Plant disease resistance response protein fami... 67 9e-12
Os11g0179500 64 5e-11
>Os07g0617500 Plant disease resistance response protein family protein
Length = 189
Score = 278 bits (712), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/155 (91%), Positives = 142/155 (91%)
Query: 35 RDKLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRASSALIGR 94
RDKLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRASSALIGR
Sbjct: 35 RDKLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRASSALIGR 94
Query: 95 FQGVVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGA 154
FQGVVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGA
Sbjct: 95 FQGVVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGA 154
Query: 155 FRMARGYCVMXXXXXXXXXXXXXFETDLFVLLHKP 189
FRMARGYCVM FETDLFVLLHKP
Sbjct: 155 FRMARGYCVMTAAAAASTAVSVVFETDLFVLLHKP 189
>Os07g0617100 Plant disease resistance response protein family protein
Length = 175
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 7/152 (4%)
Query: 37 KLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRASSALIGRFQ 96
+L I +YMHE F+G NAT VV SP N FG+VAV D+ELR G DRA+S L+GR+Q
Sbjct: 28 ELKHIHLYMHETFSGPNATEGGVVASPF--NTTFGQVAVFDNELRTGEDRAASPLVGRYQ 85
Query: 97 GVVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGAFR 156
G + GT G + P SA ++ FTAGE GSTLS+ GP GFAG ER +VGGTG R
Sbjct: 86 GFIVGT---GRSSPGYLTSA-TVAFTAGELNGSTLSLEGPFFGFAGTAERSIVGGTGKLR 141
Query: 157 MARGYCVMXXXXXXXXXXXXXFETDLFVLLHK 188
+ARGY ++ E D FVL++
Sbjct: 142 LARGYYLLKLIGKTSPETAVS-EIDFFVLMYS 172
>Os03g0400200 Plant disease resistance response protein family protein
Length = 177
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 40 RIRVYMHERFAGANATALAVVPSPL---GANEAFGRVAVLDDELRDGPDRASSALIGRFQ 96
+ Y+HE FAG NAT ++ PSPL G+N +FG V LDDELR+G D A+S +GR +
Sbjct: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSD-AASRYLGRVE 88
Query: 97 GVVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPV-LGFAGAIERPLVGGTGAF 155
G+V L PA+ + ++L F G++ GSTL + G V G AG +ER +VGGTG F
Sbjct: 89 GLVVQADL---GNPAAAWTLLTLAFAGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRF 145
Query: 156 RMARGYCVMXXXXXXXXXXXXXFETDLFV 184
R ARGY +M FE D++V
Sbjct: 146 RRARGYSLM-TKFGNPTPNTGVFEMDVYV 173
>Os10g0398100 Plant disease resistance response protein family protein
Length = 188
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 38 LTRIRVYMHERF-AGANATALAVVP-SPLGANEAFGRVAVLDDELRDGPDRASSALIGRF 95
+T + + HE F AG N T V P + G + G V V+DD LR+G D AS L+GR
Sbjct: 36 MTHLHFFFHEVFTAGPNGTTATVAPPARSGDGSSLGFVGVVDDMLREGADPASR-LVGRA 94
Query: 96 QGVVAGTSLPGTAPPASFQSAISLVFTA-GEHAGSTLSMVG-PVLGFAGAIERPLVGGTG 153
QGV AGTSL + + +SL FT G +AGSTL + G VLG +ERP+VGGTG
Sbjct: 95 QGVTAGTSLAAADGAGAITTMLSLAFTEEGPYAGSTLQVFGRAVLGTV--MERPVVGGTG 152
Query: 154 AFRMARGYCVMXXXXXXXXXXXXXFETDLFV 184
FRMARG+ + E D +V
Sbjct: 153 KFRMARGHTLSRRVNSSDPDNLLVIEYDAYV 183
>Os11g0179400
Length = 178
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 35 RDKLTRIRVYMHERFAGANATALAVVPSPLGANEA--FGRVAVLDDELRDGPD-RASSAL 91
+ K R+RVY H+ G N+T V +P A FG V V+DD L DGP A S L
Sbjct: 28 QQKEMRMRVYWHDVVTGPNSTVAKVAEAPTSRASATVFGTVYVIDDPLTDGPSLTAPSRL 87
Query: 92 IGRFQG--VVAGTSLPGTAPPASFQSAISLVFTAGE-HAGSTLSMVGPVLGFAGAIERPL 148
+G QG V AG S A+S VF A E + GS++++ GP + E P+
Sbjct: 88 VGHAQGMYVSAGKET------MSLLMAMSFVFAADEPYNGSSVAIFGPNPARPVS-EIPV 140
Query: 149 VGGTGAFRMARGYC 162
VGGTGAFR ARGYC
Sbjct: 141 VGGTGAFRFARGYC 154
>Os07g0107300 Plant disease resistance response protein family protein
Length = 229
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 39 TRIRVYMHERFAGANATALAVVPSPLGAN----EAFGRVAVLDDELRDGPDRASSALIGR 94
T + +MH+ +G+ TA+ V+ P AN FG V+DD L + A+S +GR
Sbjct: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTE-TSSATSPEVGR 88
Query: 95 FQGVVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGA 154
QG +SL ++P + ++L FTAGE+ GST++++G A E +VGGTG
Sbjct: 89 AQGFYMMSSL--SSP--TLMMCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGK 144
Query: 155 FRMARGYCVMXXXXXXXXXXXXXFETDLFV 184
FRMA GY V FE D++V
Sbjct: 145 FRMATGYVVW--KTASMSASTGVFELDVYV 172
>Os11g0179100 Plant disease resistance response protein family protein
Length = 177
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 36 DKLTRIRVYMHERFAGA-NATALAVVPSPLGANEA--FGRVAVLDDELRDGPDRASSALI 92
+ T++RV+ H+ +G N+T V +P A FG V V+DD L DGP+ +S L+
Sbjct: 26 QRETKLRVFWHDVVSGGPNSTVAQVAEAPTTNASATGFGAVVVIDDPLTDGPNLTASRLV 85
Query: 93 GRFQG--VVAGTSLPGTAPPASFQSAISLVFTA-GEHAGSTLSMVGPVLGFAGAIERPLV 149
GR QG V AG S A++ VF G + GS+L+++G E P+V
Sbjct: 86 GRAQGMYVAAGKD------ALSLMMAMNFVFAGDGPYNGSSLAILGANPAERAVREMPVV 139
Query: 150 GGTGAFRMARGYC 162
GGTG FR ARGYC
Sbjct: 140 GGTGVFRFARGYC 152
>Os11g0180000 Plant disease resistance response protein family protein
Length = 185
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 39 TRIRVYMHERFAGANATALAVV-PSPLGANEAFGRVAVLDDELRDGPDRASSALIGRFQG 97
T + Y H++ + + TA+ VV P + FG + V+DD L +GP+ S + GR QG
Sbjct: 42 THLHFYFHDKVSKPSPTAVRVVDPVDPSSRSFFGMINVMDDPLTEGPEPESKPM-GRAQG 100
Query: 98 VVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGAFRM 157
+ G+ F A++LVFT G + GS ++++G F E P++GGTGAFR
Sbjct: 101 LYMGSDQAKLG----FLQAMNLVFTDGTYNGSVVTVLGRNCPFDDVREMPVIGGTGAFRF 156
Query: 158 ARGYCVMXXXXXXXXXXXXXFETDLFVL 185
ARGY E +++V+
Sbjct: 157 ARGYAQARTHTLDLKTGDAIVEYNVYVM 184
>Os12g0174700 Plant disease resistance response protein family protein
Length = 184
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 40 RIRVYMHERFAGANATALAVVPSPLGANEA--FGRVAVLDDELRDGPDRASSALIGRFQG 97
I+VY H+ +G + TA+ V + + A FG V V+DD L GPD +S+ +GR QG
Sbjct: 40 HIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQG 99
Query: 98 VVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGAFRM 157
T + + ++ VF +G + GST++++G FA E +VGGTG FR
Sbjct: 100 ----TYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRW 155
Query: 158 ARGYCVMXXXXXXXXXXXXXFETDLFV 184
ARGY E +L++
Sbjct: 156 ARGYAQARTHTLDMKTGDATVEYNLYI 182
>Os07g0107500 Plant disease resistance response protein family protein
Length = 220
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 39 TRIRVYMHERFAGANATALAVVPSPLGANEA-----FGRVAVLDDELRDGPDRASSALIG 93
T + ++MH+ G +ATA+ VV A + FG+V V+DD L +GP R SS +G
Sbjct: 50 THLHLFMHDVLTGPDATAVDVVNGTGRAFDVAGGLRFGQVVVMDDVLTEGPSR-SSPRVG 108
Query: 94 RFQGVVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTG 153
R QG + + P F +++V TAG +AGST++++G E +VGGTG
Sbjct: 109 RTQGFYVFSDM--NVPALLF--CMNVVLTAGPYAGSTVTILGRDHITQPLRELSVVGGTG 164
Query: 154 AFRMARGYCVMXXXXXXXXXXXXXFETDLFV 184
AFRMA GY V+ E D+FV
Sbjct: 165 AFRMATGY-VLWRTASWQFRADAVLELDVFV 194
>Os11g0178800 Plant disease resistance response protein family protein
Length = 176
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 38 LTRIRVYMHERFAGANATALAVVP--SPLGANEAFGRVAVLDDELRDGPDRASSALIGRF 95
+T+ +VY H+ G TA+ V S G++ FG V +DD L +SS+ +GR
Sbjct: 31 MTKFKVYFHDVVGGTKPTAIRVAQAASTNGSSTFFGAVVAIDDPLTTDA-ASSSSEVGRA 89
Query: 96 QGVVAGTSLPGTAPPASFQ--SAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTG 153
QG A +F ++ VFTAG+H GSTL++VG + E +VGG+G
Sbjct: 90 QGSYT------FADQKTFGLLMNMNFVFTAGDHKGSTLAIVGRNEVLSAVREMSIVGGSG 143
Query: 154 AFRMARGYC 162
FRMARGY
Sbjct: 144 KFRMARGYV 152
>Os11g0179000 Plant disease resistance response protein family protein
Length = 178
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 39 TRIRVYMHERFAGANATALAVVP--SPLGANEAFGRVAVLDDELRDGPDRASSA-LIGRF 95
T+I+VY H+ AG N TA+ V S ++ FG V +DD L P A++ ++GR
Sbjct: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPAAAAAGEVVGRA 91
Query: 96 QGVV--AGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTG 153
QG A + G +F VFTAG+H GS+L+++G + E +VGG+G
Sbjct: 92 QGTYTFADQRVIGLLMDMNF------VFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSG 145
Query: 154 AFRMARGYC 162
FRMARGY
Sbjct: 146 KFRMARGYA 154
>Os11g0179500
Length = 182
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 39 TRIRVYMHERFAGANATALAVVPSPLGANEAF-GRVAVLDDELRDGPDRASSALIGRFQG 97
T + Y H++ + +A+ VV P + F G V V+DD L + PD AS L+G QG
Sbjct: 39 THLHFYFHDKVTSPSPSAVRVVNPPNNTSLTFLGMVVVMDDPLTERPDPASK-LVGHAQG 97
Query: 98 VVAGTSLPGTAPPASFQSAISLVFTAGEHAGSTLSMVGPVLGFAGAIERPLVGGTGAFRM 157
+ + F A+++V TAG + GS + ++G E P++GGTG FR
Sbjct: 98 MYVSSD----QARIGFLQAMNIVLTAGSYNGSVVIVLGSNHISDIIHEMPILGGTGHFRF 153
Query: 158 ARGYC 162
ARGY
Sbjct: 154 ARGYA 158
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,979,250
Number of extensions: 201834
Number of successful extensions: 677
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 667
Number of HSP's successfully gapped: 16
Length of query: 189
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 94
Effective length of database: 12,075,471
Effective search space: 1135094274
Effective search space used: 1135094274
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)