BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0343100 Os06g0343100|AK100422
(1084 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA he... 2096 0.0
Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA he... 994 0.0
Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA he... 745 0.0
Os07g0508000 Similar to ADR224Wp 721 0.0
Os01g0212100 ATP-dependent helicase, DEAH-box family protein 617 e-176
Os03g0314100 Helicase, C-terminal domain containing protein 541 e-153
Os11g0310800 ATP-dependent helicase, DEAH-box family protein 527 e-149
Os06g0192500 ATP-dependent helicase, DEAH-box family protein 346 7e-95
Os02g0736600 ATP-dependent helicase, DEAH-box family protein 198 1e-50
Os04g0432300 Double-stranded RNA binding domain containing ... 191 3e-48
Os01g0767700 Similar to DEIH-box RNA/DNA helicase 171 2e-42
Os03g0282700 DEAD/DEAH box helicase, N-terminal domain cont... 162 2e-39
Os11g0196100 109 1e-23
Os01g0118100 Similar to Maleless protein 84 5e-16
Os01g0315300 80 7e-15
>Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1084
Score = 2096 bits (5431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1025/1084 (94%), Positives = 1025/1084 (94%)
Query: 1 MVAAKVSTPAGGAVRDGLRRLTQLSLVSKVCSELEAHLGVGDRVLAEFIVDLGRASPSVA 60
MVAAKVSTPAGGAVRDGLRRLTQLSLVSKVCSELEAHLGVGDRVLAEFIVDLGRASPSVA
Sbjct: 1 MVAAKVSTPAGGAVRDGLRRLTQLSLVSKVCSELEAHLGVGDRVLAEFIVDLGRASPSVA 60
Query: 61 DFDAKLKAHGADLPDYLARTLHTVIHXXXXXXXXXXXXXXXXXXSRGTGARVCGKDKAEE 120
DFDAKLKAHGADLPDYLARTLHTVIH SRGTGARVCGKDKAEE
Sbjct: 61 DFDAKLKAHGADLPDYLARTLHTVIHAIPTHADDAPAPAPQNPASRGTGARVCGKDKAEE 120
Query: 121 RVRDGDPGLYQVCRGKVTGLADAGCFVRLDDARGREGLVHVSEMPGRRIAVKRGQEVFVK 180
RVRDGDPGLYQVCRGKVTGLADAGCFVRLDDARGREGLVHVSEMPGRRIAVKRGQEVFVK
Sbjct: 121 RVRDGDPGLYQVCRGKVTGLADAGCFVRLDDARGREGLVHVSEMPGRRIAVKRGQEVFVK 180
Query: 181 IVSVQGRNLGLSMRDVDQDTGKDLLPLQRARGEDDVPRPMANPWXXXXXXXXXXXGVSGI 240
IVSVQGRNLGLSMRDVDQDTGKDLLPLQRARGEDDVPRPMANPW GVSGI
Sbjct: 181 IVSVQGRNLGLSMRDVDQDTGKDLLPLQRARGEDDVPRPMANPWTDRAAATRRRTGVSGI 240
Query: 241 VIPEDNQTGTAXXXXXXXXXXXXXXWEMKQLIASGVLNAKDYPAFDDEDSEGMNYQXXXX 300
VIPEDNQTGTA WEMKQLIASGVLNAKDYPAFDDEDSEGMNYQ
Sbjct: 241 VIPEDNQTGTASSRRPIRRMSSPERWEMKQLIASGVLNAKDYPAFDDEDSEGMNYQEEGV 300
Query: 301 XXXXXXXXXXXXPAFLRGQGRSTIDVSPVRISTNPDGSLSRAAVLQSALIKEWRDIRNED 360
PAFLRGQGRSTIDVSPVRISTNPDGSLSRAAVLQSALIKEWRDIRNED
Sbjct: 301 EEELEIELNEDEPAFLRGQGRSTIDVSPVRISTNPDGSLSRAAVLQSALIKEWRDIRNED 360
Query: 361 QRALVDSIPKDLNRPWEDPVPEVGGRYLAQELRGVGLSAESMPEWKKEAYGKTVTFGQTS 420
QRALVDSIPKDLNRPWEDPVPEVGGRYLAQELRGVGLSAESMPEWKKEAYGKTVTFGQTS
Sbjct: 361 QRALVDSIPKDLNRPWEDPVPEVGGRYLAQELRGVGLSAESMPEWKKEAYGKTVTFGQTS 420
Query: 421 RLSILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIA 480
RLSILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIA
Sbjct: 421 RLSILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIA 480
Query: 481 CTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDT 540
CTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDT
Sbjct: 481 CTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDT 540
Query: 541 DLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNI 600
DLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNI
Sbjct: 541 DLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNI 600
Query: 601 FTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLY 660
FTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLY
Sbjct: 601 FTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLY 660
Query: 661 ERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYV 720
ERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYV
Sbjct: 661 ERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYV 720
Query: 721 IDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPP 780
IDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPP
Sbjct: 721 IDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPP 780
Query: 781 TTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLT 840
TTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLT
Sbjct: 781 TTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLT 840
Query: 841 RVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGN 900
RVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGN
Sbjct: 841 RVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGN 900
Query: 901 FFQPEGDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVV 960
FFQPEGDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVV
Sbjct: 901 FFQPEGDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVV 960
Query: 961 SAGNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQQPEWVIYHEV 1020
SAGNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQQPEWVIYHEV
Sbjct: 961 SAGNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQQPEWVIYHEV 1020
Query: 1021 VMTTKEYMREVTAIDPRWLVELAPRFYRSADPTKISKRKRQERIEPLYDRYNEPNSWRLS 1080
VMTTKEYMREVTAIDPRWLVELAPRFYRSADPTKISKRKRQERIEPLYDRYNEPNSWRLS
Sbjct: 1021 VMTTKEYMREVTAIDPRWLVELAPRFYRSADPTKISKRKRQERIEPLYDRYNEPNSWRLS 1080
Query: 1081 KRRG 1084
KRRG
Sbjct: 1081 KRRG 1084
>Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 536
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/536 (86%), Positives = 508/536 (94%)
Query: 549 MLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNIFTIPGRTY 608
MLDEAHERTI+TD+LF LLK+LI+RR+D++LIVTSATLDAEKFSGYFF+CNIFTIPGRT+
Sbjct: 1 MLDEAHERTIHTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 60
Query: 609 PVEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSLGR 668
PVEILY+KQPESDY+ AAL+TV QIHLTEPEGDILLFLTGQEEIDHACQCLYERMK LG+
Sbjct: 61 PVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKGLGK 120
Query: 669 NVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFAKL 728
+VPEL+I VYSA P+EMQSKIF+P PPGKRKVVVATNIAEAS+TIDGIYYV+DPGFAK+
Sbjct: 121 DVPELIILPVYSALPSEMQSKIFDPAPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKI 180
Query: 729 NVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTTPEIQR 788
NVYN KQGLDSL+ITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM PTT PEIQR
Sbjct: 181 NVYNSKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQR 240
Query: 789 INLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRMAE 848
INLG TVLNMKAMGINDLLSFDFMDPPAPQ+LI+AMEQLY+LGALDEEGLLT++GR+MAE
Sbjct: 241 INLGSTVLNMKAMGINDLLSFDFMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKMAE 300
Query: 849 FPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGNFFQPEGDH 908
FP +PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD+KR FFQPEGDH
Sbjct: 301 FPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDH 360
Query: 909 LTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVVSAGNDLTK 968
LTLL VY+AWKAK FSGPWC+ENFVQ SLRRAQDVRKQLL IMD+YKL+VVSAG + TK
Sbjct: 361 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGRNFTK 420
Query: 969 VRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQQPEWVIYHEVVMTTKEYM 1028
+RKAITAGFFFHAARKDPQ GYRT+ ++Q VYIHP+SALFQ+QP+WVIYHE+VMTTKEYM
Sbjct: 421 IRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYM 480
Query: 1029 REVTAIDPRWLVELAPRFYRSADPTKISKRKRQERIEPLYDRYNEPNSWRLSKRRG 1084
REVT IDP+WL ELAPRFY+SADPTK+SKRKRQERIEPLYDRY+EPNSWRLSKRR
Sbjct: 481 REVTVIDPKWLTELAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 536
>Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1070
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/640 (55%), Positives = 478/640 (74%), Gaps = 8/640 (1%)
Query: 420 SRLSILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYIT--RG 477
++ ++ ++R++LP+++LK++L++A+ +++VL+V+GETGSGKTTQ+ QYL E GY R
Sbjct: 393 AKATLQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRK 452
Query: 478 KIACTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREIL 537
K+ACTQPRRVAA SVA RV+EE G +LG EVGYSIRF+D T TVIKYMTDGMLLRE L
Sbjct: 453 KVACTQPRRVAAMSVAARVAEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFL 512
Query: 538 LDTDLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFD 597
+ DL SYSVV++DEAHERT+ TDILF L+K + R R D+KL+++SATL+A+KFS +F
Sbjct: 513 GEPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFSDFFDA 572
Query: 598 CNIFTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEG--DILLFLTGQEEIDHA 655
+F IPGR + V I Y+ PE+DY+ AA++TV Q+H+TEP G DILLFLTGQEEI+
Sbjct: 573 APVFRIPGRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETV 632
Query: 656 CQCLYERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITID 715
+ L R++ LG V EL+I +Y+ PAE+Q+KIFEP P G RKVV+ATNIAE S+TID
Sbjct: 633 EEILRHRLRVLGGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTID 692
Query: 716 GIYYVIDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 775
GI YV+DPGF K+ YNP+ G++SL++ P+S+ASA+QRAGR+GRTGPG+C+RLYTE +
Sbjct: 693 GIKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFV 752
Query: 776 NEMPPTTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDE 835
+++ PEIQR NL VL +KA+GINDL+ FDFMDPP +SL+ A+E+L+ LGAL+
Sbjct: 753 SDLDDDAVPEIQRSNLASVVLALKALGINDLVGFDFMDPPPAESLLRALEELFALGALNS 812
Query: 836 EGLLTRVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQA 894
G LT+ GRRMAEFP +P LSK ++AS GCS+E++TI AM+ GN +FYRPR+K+ A
Sbjct: 813 RGELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVHA 872
Query: 895 DRKRGNFFQPE-GDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMD 953
D R F GDH+ LL VY AW +S WC E+FVQ ++RRA+DVR QL +++
Sbjct: 873 DAARRAFHAGNAGDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALLE 932
Query: 954 KYKLNVVSA--GNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQQ 1011
+ ++ S+ G DL VRKA+TAG+F HAAR G YR + Q V++HP+S + Q
Sbjct: 933 RVEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQRDGSYRAVKSRQTVFVHPSSGVAQAP 992
Query: 1012 PEWVIYHEVVMTTKEYMREVTAIDPRWLVELAPRFYRSAD 1051
P W +YHE+V+TTKEYMR+VT + P WLVE+AP +Y D
Sbjct: 993 PRWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYERKD 1032
>Os07g0508000 Similar to ADR224Wp
Length = 1280
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/856 (46%), Positives = 548/856 (64%), Gaps = 68/856 (7%)
Query: 266 WEMKQLIASGVLNAKDYPA-FDDEDSEGMNYQXXXXXXXXXXXXXXXXPAFLRGQGRSTI 324
WE +QL+ SG + + FDDED + P FL G+ T
Sbjct: 424 WEDRQLLRSGAVRGTEVQTEFDDEDERKV-----------ILLVHDTKPPFLDGRVVFTK 472
Query: 325 DVSPVRISTNPDGSLSRAAVLQSALIKEWRDIRNEDQRALVDSIPKDLNRPWEDPVPEVG 384
PV +P ++ A SAL++E R+ + S+ K R WE +
Sbjct: 473 QAEPVMPLKDPTSDMAIVARKGSALVREIREKQ---------SMNKSRQRFWE-----LA 518
Query: 385 GRYLAQELRGVGLSAESMP------------EWKKEAY--------GKTVT-FGQTSRLS 423
G L L GV +AE + ++K+EA + V+ F ++ LS
Sbjct: 519 GSKLGNIL-GVEKTAEQVDADTATVGDQGEIDFKEEAKFSQHMKVKAEAVSDFAKSKSLS 577
Query: 424 ILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIACTQ 483
+QRQ LPIF ++++L++ VR+NQV+VV+GETGSGKTTQ+TQYL E GY T G + CTQ
Sbjct: 578 --QQRQYLPIFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDGYTTTGIVGCTQ 635
Query: 484 PRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTDLS 543
PRRVAA SVAKRVSEE LG +VGY+IRF+D T P+T+IKYMTDG+LLRE L D DL
Sbjct: 636 PRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLD 695
Query: 544 SYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNIFTI 603
Y V+++DEAHER++ TD+LF +LKK++ RR D KLIVTSATL+A+KFS +F +F I
Sbjct: 696 KYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHI 755
Query: 604 PGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERM 663
PGRT+PV I++SK P DY+ AA+ IH+T GDIL+F+TGQEEI+ C L ER+
Sbjct: 756 PGRTFPVNIMFSKTPCEDYVEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCYALAERL 815
Query: 664 KSL----GRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYY 719
+ L + VP+L I +YS PA++Q+KIF+ G RK +VATNIAE S+T+DGI+Y
Sbjct: 816 EQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFY 875
Query: 720 VIDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMP 779
VID G+ K+ VYNP+ G+D+L + P+S+A+A QRAGRAGRTGPG CYRL+TESAY+NEM
Sbjct: 876 VIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLFTESAYQNEML 935
Query: 780 PTTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLL 839
P PEIQR NLG VL +K++ + +LL FDFMDPP ++++ +M QL+ LGAL+ G L
Sbjct: 936 PNPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQENILNSMYQLWVLGALNNVGAL 995
Query: 840 TRVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRG 899
T +G +M EFP +P L+KMLL L C DE+LTI++M+ ++F+RP+++ ++D R
Sbjct: 996 TVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1055
Query: 900 NFFQPEGDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNV 959
FF PE DHLTLL VY WK+ Q+ G WC ++F+ + LR+A++VR QLL+I+ K+ +
Sbjct: 1056 KFFVPESDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPL 1115
Query: 960 VSAGNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALF--QQQPEWVIY 1017
S + VRKAI + +F +AAR G Y + ++HP+SAL+ P++V+Y
Sbjct: 1116 TSCHMEWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVY 1175
Query: 1018 HEVVMTTKEYMREVTAIDPRWLVELAPRFY--RSADPTKISKRKRQ--------ERIEPL 1067
HE+V+TTKEYM+ VTA+DP+WL EL P F+ + D + + +KRQ E +E L
Sbjct: 1176 HELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKETDTSLLDHKKRQKEDKTAMEEEMEKL 1235
Query: 1068 YDRYNEPNSWRLSKRR 1083
R + + RL K R
Sbjct: 1236 --RQEQAEAARLEKER 1249
>Os01g0212100 ATP-dependent helicase, DEAH-box family protein
Length = 700
Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/654 (47%), Positives = 438/654 (66%), Gaps = 23/654 (3%)
Query: 423 SILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGK-IAC 481
S+ QRQ LP+++ + ++ V + +V+GETGSGK+TQ+ QYL EAG+ G+ I C
Sbjct: 43 SLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKSTQIPQYLKEAGWAEGGRLIGC 102
Query: 482 TQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPD-TVIKYMTDGMLLREILLDT 540
TQPRR+A +SVA RV+EE G RLGEEVGY+IRF+D T P T+IK++TDG+L+RE++ D
Sbjct: 103 TQPRRLAVQSVASRVAEEVGVRLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDP 162
Query: 541 DLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFF---- 596
L+ YSV+M+DEAHER+I TD+L LLKK+ RRR DL+LI++SAT++A S +F
Sbjct: 163 LLTKYSVIMVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEARSMSTFFNIRRK 222
Query: 597 -------------DCNIFTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEGDIL 643
+ I ++ G+ Y VEI Y ++P SDY+ AA+ TV IH EP GDIL
Sbjct: 223 NSMLESADHLPNPEPAILSVEGKGYTVEIHYVEEPVSDYLQAAVNTVLIIHEKEPPGDIL 282
Query: 644 LFLTGQEEIDHACQCLYERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVV 703
+FLTGQ++ID A + L E ++ GR+ +LLI +YS P Q IF PT GKRKVV+
Sbjct: 283 VFLTGQDDIDAAVKMLNEEIQHRGRHYLDLLILPLYSGLPRGDQDLIFTPTSKGKRKVVI 342
Query: 704 ATNIAEASITIDGIYYVIDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPG 763
+TNIAE S+T++G+ YV+D GF+K YNP ++SL++ PIS+ASA+QRAGRAGR PG
Sbjct: 343 STNIAETSLTLEGVVYVVDSGFSKQKCYNPISDIESLVVAPISKASARQRAGRAGRVRPG 402
Query: 764 KCYRLYTESAYRNEMPPTTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITA 823
KC+RLYTE Y EM P PE+QR NL + +KA+GI+++L FD+ P+P+++I A
Sbjct: 403 KCFRLYTEEFYLKEMQPEGIPEMQRSNLVSCITQLKALGIDNILGFDWPASPSPEAMIRA 462
Query: 824 MEQLYNLGALDEEGLLTR-VGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGN 882
+E LY+LG LDE+ LT +G ++AE P +P +SKM+L++ + GCSDEILTI A + +
Sbjct: 463 LEVLYSLGILDEDAKLTVPLGFQVAEIPLDPMISKMILSANNFGCSDEILTIAAFLSVQS 522
Query: 883 IFYRPREKQAQADRKRGNFFQPEGDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQ 942
++ R + + D + F EGDH+T L +Y+ + S WCY+NF+ +L++
Sbjct: 523 VWVSMRGVKKEFDEAKLRFAAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQALKKVI 582
Query: 943 DVRKQLLEIMDKYKLNVVSAGNDLTKVRKAITAGFFFHAARKDP---QGGYRTIADHQQV 999
D+R+QL+ I+ ++ + + S D+ VRKAI AG F +A + G Y+TI Q+V
Sbjct: 583 DIREQLVRIIKRFGIPLTSCDRDMEAVRKAIIAGAFAYACHLEEYSQNGMYKTIRTSQEV 642
Query: 1000 YIHPASALFQQQPEWVIYHEVVMTTKEYMREVTAIDPRWLVELAPRFYRSADPT 1053
YIHP+S LF+ P+WVIY +V T K YMR V AI+P WL E AP FY+ P
Sbjct: 643 YIHPSSVLFRVNPKWVIYQSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFRTPN 696
>Os03g0314100 Helicase, C-terminal domain containing protein
Length = 564
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/465 (55%), Positives = 351/465 (75%), Gaps = 8/465 (1%)
Query: 422 LSILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEA-GYITRGKIA 480
L ILE+R++LP+++ K++ + +RDNQ L+++GETGSGKTTQ+ Q++ EA G R +A
Sbjct: 56 LEILEKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVA 115
Query: 481 CTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDT 540
CTQPRRVAA SV++RV+EE +GEEVGYSIRF+D + TV+KY+TDGMLLRE + D
Sbjct: 116 CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 175
Query: 541 DLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNI 600
L Y V++LDEAHERT+ TD+LF LLK++++ R DLKL+V SATL+AEKF YF +
Sbjct: 176 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQTYFSGAPL 235
Query: 601 FTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLY 660
+PGR +PVEI Y+++PE DY+ AA+ TV QIH+ EP GDIL+FLTG+EEI+ AC+ +
Sbjct: 236 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKIN 295
Query: 661 ERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTP-------PGKRKVVVATNIAEASIT 713
+ + ++G V + + +YS P MQ KIFEP P P RK+VV+TNIAE S+T
Sbjct: 296 KEINNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPAPSREGGPAGRKIVVSTNIAETSLT 355
Query: 714 IDGIYYVIDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESA 773
IDGI YVIDPGF+K VYNP+ ++SL+++PIS+ASA QRAGRAGRT PGKC+RLYTE +
Sbjct: 356 IDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKS 415
Query: 774 YRNEMPPTTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGAL 833
+ +++ P T PEI R NL TVL +K +GI+DL+ FDFMDPPAP++L+ A+E L LGAL
Sbjct: 416 FNDDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 475
Query: 834 DEEGLLTRVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMI 878
D++G LT +G M+EFP +P +SKML+ S CS+EIL+I AM+
Sbjct: 476 DDDGNLTPLGETMSEFPLDPQMSKMLVISPKYNCSNEILSISAML 520
>Os11g0310800 ATP-dependent helicase, DEAH-box family protein
Length = 708
Score = 527 bits (1357), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/648 (43%), Positives = 409/648 (63%), Gaps = 25/648 (3%)
Query: 431 LPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIACTQPRRVAAE 490
LPI ++E++ AV N V+VVIGETGSGK+TQ++Q L GY RG IA TQPRRVAA
Sbjct: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPRRVAAV 74
Query: 491 SVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTDLSSYSVVML 550
SV++RV++E LG+EVGY+IRF+D T T IKY+TDG+LLRE L D +L YSV++L
Sbjct: 75 SVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVIIL 134
Query: 551 DEAHERTIYTDILFALLKKLIR-RRTDLKLIVTSATLDAEKFSGYFFDCNIFTIPGRTYP 609
DEAHER++ TDIL L+K+LI+ R +DLK+++TSATLD K S +F C + IPG +P
Sbjct: 135 DEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLFP 194
Query: 610 VEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSLGR- 668
VE YS + ++Y+ ++L T IH+ E GD+L+F+TG+++ID L ER+++L
Sbjct: 195 VEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEEG 254
Query: 669 NVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFAKL 728
+ + L+ ++ + P E Q ++F P PP R+ +VATN+AE S+T+DG+ +VID G+ K
Sbjct: 255 SCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYVKQ 314
Query: 729 NVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTTPEIQR 788
YNP G+ SL + IS+ A QRAGRAGRT PGKCYRLY S Y+ E T PEIQR
Sbjct: 315 RQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEIQR 374
Query: 789 INLGETVLNMKAMGIND--LLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRM 846
+L +VL +K++ + D +L FDF+DPP+ +SL A+ QLY + A+DE G +T VGR M
Sbjct: 375 SSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGRIM 434
Query: 847 AEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGNFFQPE- 905
AE P EP LS+ L+ + +LGC + LT+ A++ F R K + RKR P+
Sbjct: 435 AELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQEL--PDG 492
Query: 906 ---GDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVV-- 960
GDH+ LL ++++W + WC ++ +Q+ ++ ++DVR QL +I+ K
Sbjct: 493 SGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGSTDV 552
Query: 961 ------SAGNDLTKVRKAITAGFFFH-AARKDPQGGYRTIADHQQ-VYIHPASAL----F 1008
+ D K+R+A+ G+ A R GY T+ Q V +HP S L +
Sbjct: 553 QAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEY 612
Query: 1009 QQQPEWVIYHEVVMTTKEYMREVTAIDPRWLVELAPRFYRSADPTKIS 1056
+ P +V+YHE++ TT+ +MR V+A+D W+ + + R D K+S
Sbjct: 613 GKLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLER-LDMNKLS 659
>Os06g0192500 ATP-dependent helicase, DEAH-box family protein
Length = 386
Score = 346 bits (887), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 187/357 (52%), Positives = 234/357 (65%), Gaps = 32/357 (8%)
Query: 429 QSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGK-IACTQPRRV 487
+SLPI ++ LIE VR N L+V+GETGSGKTTQ+ Q+L +AG+ GK I TQPRRV
Sbjct: 29 KSLPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYDAGFCQDGKVIGITQPRRV 88
Query: 488 AAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTDLSSYSV 547
AA +VAKRV+EE +LG++VGYSIRFDD T T IKYMTDG+LLRE LLD LS YSV
Sbjct: 89 AAVTVAKRVAEECNDQLGKKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYSV 148
Query: 548 VMLDEAHERTIYTDILFALLKKLIRRRT-------------------------------D 576
+++DEAHERT++TD+L LLKK+ R+
Sbjct: 149 IVVDEAHERTVHTDVLLGLLKKVQHSRSIYANKNGKILPDIQHQSQYFTLKACQGTKIDP 208
Query: 577 LKLIVTSATLDAEKFSGYFFDCNIFTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLT 636
LKLI+ SA+LDA+ FS YF I GR YPV+ILY+ QPESDY+ A L+T+ QIHL
Sbjct: 209 LKLIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDILYTYQPESDYLDATLVTIFQIHLE 268
Query: 637 EPEGDILLFLTGQEEIDHACQCLYERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPP 696
E GDIL FLTGQEEI+ + + ER + L ++ +YS+ P+E Q F+P P
Sbjct: 269 EGPGDILAFLTGQEEIESLDRLIQERARQLPPQRSKIWTTPIYSSLPSEQQMNAFKPAPA 328
Query: 697 GKRKVVVATNIAEASITIDGIYYVIDPGFAKLNVYNPKQGLDSLIITPISQASAKQR 753
G RKVV+ATNIAE S+TI GI YVIDPG K YNP G++SLII P+S+A A QR
Sbjct: 329 GTRKVVLATNIAETSVTIPGIKYVIDPGMVKARAYNPVTGMESLIIIPVSKAQALQR 385
>Os02g0736600 ATP-dependent helicase, DEAH-box family protein
Length = 1272
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 157/265 (59%), Gaps = 33/265 (12%)
Query: 428 RQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYIT------RGKIAC 481
R+ LPI ++ E++EA+ +N V+++ GETG GKTTQV Q+L EAG+ T +G I
Sbjct: 237 RRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSNRSDRKGIIGI 296
Query: 482 TQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTD 541
TQPRRVA + A+RVS E G +LG+EVG+ +R D G IK+MTDG+LLRE+ D
Sbjct: 297 TQPRRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILLREVQSDFL 356
Query: 542 LSSYSVVMLDEAHERTIYTDILFALLKKLIRRR-----------------------TDLK 578
L YSV++LDEAHER++ TDIL +L ++I+ R + LK
Sbjct: 357 LKRYSVIILDEAHERSLNTDILIGMLSRIIKIRKSLYIEQQEKIRCGLSINPEDKISQLK 416
Query: 579 LIVTSATLDAEKF--SGYFFDC--NIFTIPGRTYPVEILYSKQPESDYMHAALLTVSQIH 634
+++ SATL + F + FD +P R +PV + +SK DY+ A V IH
Sbjct: 417 VVLMSATLQLKDFISNRRLFDVIPPAIKVPVRQFPVTVHFSKSTHDDYLGQAYKKVMSIH 476
Query: 635 LTEPEGDILLFLTGQEEIDHACQCL 659
P+G IL+F+TGQ E+D+ C+ L
Sbjct: 477 KKLPQGGILVFVTGQREVDYLCKKL 501
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 256/550 (46%), Gaps = 103/550 (18%)
Query: 620 SDYMHAALLTVSQIHLTEPEG-DILLFLTGQEEIDH---ACQCLYERMKSLGRNVPELLI 675
S + A+ +S++ EPE D+ T EE H +C R S G+ L +
Sbjct: 605 SSGLKASFKAISRVS-GEPESTDVPSNATILEESSHVPCTSKCTEPRSVSHGK----LRV 659
Query: 676 YAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFAKLNVYNPKQ 735
+Y+ PA Q ++F+ P G+R VVVATN+AE S+TI GI YV+D G K+ YN
Sbjct: 660 LPLYAMLPASQQLRVFQDIPDGERLVVVATNVAETSLTIPGIKYVVDTGKQKVKNYNHAT 719
Query: 736 GLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAY-RNEM-PPTTTPEIQRINLGE 793
G+ S I IS+ASA QR+GRAGRTGPG CY LY+ +AY ++E+ P + PEI+ I +
Sbjct: 720 GMASYEIQWISKASASQRSGRAGRTGPGHCYHLYSAAAYGKDELFPEFSEPEIKNIPVDG 779
Query: 794 TVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRMAEFPQEP 853
VL +K M IN + +F F PP +SL+ A L L ALD +G T +G+ MA++P P
Sbjct: 780 VVLMLKFMNINKVENFPFPTPPDKESLVEAERCLKVLEALDSKGEPTLMGKAMAQYPMSP 839
Query: 854 PLSKMLLASVDLGCSDEI-----------------LTIIAMIQTGNIFY----------- 885
S++LL V + S L+ T N F
Sbjct: 840 RHSRLLLTIVKILNSQRCFSRPNFILGYAAAAASALSFTNPFLTQNEFSGESKQDNPDSE 899
Query: 886 ------RPREKQAQADRKRGN--FFQPEGDHLTLLTVYQAWKAKQFSGPWCYENFVQLTS 937
R R+K+ +A + + F P D L++ Q ++ + +C N + L +
Sbjct: 900 DKDRQERKRQKKLKAMVREAHTKFSNPSSDALSISRALQLFELSENPVEFCRVNSLHLKT 959
Query: 938 LRRAQDVRKQLLEIM----------------------------DKYKLNVVSAGNDLTKV 969
+ +RKQLL ++ DK + + N+ +
Sbjct: 960 MEEMSKLRKQLLRLIFHHSKFCEEFSWKFGVSEDVEEAWRHESDKKPMQL----NEEELL 1015
Query: 970 RKAITAGF---------FFHAARKDPQG----GYRTIADHQQVYIHPASALFQQQPEWVI 1016
+ I AG+ F KD + Y++ A + +Y+H +S++ + PE+V+
Sbjct: 1016 GQGICAGWADRVAKRIRAFPGPSKDDKKVRAVHYQSCAFNDTIYLHRSSSVARIAPEFVV 1075
Query: 1017 YHEVVMTTKEYMREVTAIDPRWLVELAPRFYRSADPTKISKRKRQER-------IEPLYD 1069
Y E++ T + YM VT++ P W+++ A + P + K + + + P++
Sbjct: 1076 YSELLHTKRSYMHGVTSVKPGWILKYASSLCTFSAPLEDPKPYYEPQKDQVYCYVSPIFS 1135
Query: 1070 RYNEPNSWRL 1079
R+N W+L
Sbjct: 1136 RHN----WQL 1141
>Os04g0432300 Double-stranded RNA binding domain containing protein
Length = 1114
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 155/571 (27%), Positives = 260/571 (45%), Gaps = 110/571 (19%)
Query: 418 QTSRLSILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAE------- 470
Q+S L +LE R SLPI R K+ ++ +++N V+VV GETG GKTTQV Q++ +
Sbjct: 576 QSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESEL 635
Query: 471 AGYITRGKIACTQPRRVAAESVAKRVSEEFGCRLG-----EEVGYSIRFDDHTGPDTVIK 525
GY + I CTQPRR+AA SVA+RVS E C VGY +R D T +
Sbjct: 636 GGYCS---IVCTQPRRIAAISVAERVSSE-RCESSPGSKDSLVGYQVRLDSARNERTKLL 691
Query: 526 YMTDGMLLREILLDTDLSSYSVVMLDEAHERTI----YTDILFALLKKLIRRRTD----- 576
+ T G+LLR++ + DLS + V++DE HERTI D F + + L+ +R++
Sbjct: 692 FCTTGILLRKLSGNNDLSDVTHVVVDEVHERTILRKSMNDPDFPVFRSLVEKRSNQPGRK 751
Query: 577 LKLIVTSATLDAEKFSGYFFDCNIFTIPGRTYPV-----EILYSK--------------- 616
LK+I+ SAT+D+ F+ YF DC + + GRT+PV E +Y K
Sbjct: 752 LKVILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCLALDSPASGAY 811
Query: 617 --QPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEI--------DHACQCLYERMKSL 666
Q + +A+ S ++ + +++L G E + + C +
Sbjct: 812 FQQHGEKWKNAS----STVNNRRGKKNLVLSSWGDESVLTEDYVNPHYTTDCYQSYSERT 867
Query: 667 GRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFA 726
+N+ L + ++ I E PPG V + PG A
Sbjct: 868 NQNLKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFL-------------------PGVA 908
Query: 727 KLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN--EMPPTT-- 782
++++ I + SA R GR + L + R + PP
Sbjct: 909 EIDML-------------IDRLSASVRFGRESSDWILPLHSLLAPTDQRKVFQSPPENIR 955
Query: 783 -TPEIQRINLGETVLNMKAMGINDLLSF--DFMDPPAPQSLITAMEQLYNLGALDEEGLL 839
PE+ R+ L E L +K++ + + SF ++PP +++ +A++ LY +GA + L
Sbjct: 956 KVPEMLRMPLTELCLQIKSLHLGGIKSFLLKAIEPPKEEAISSAIDLLYQVGAFEGHEEL 1015
Query: 840 TRVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRG 899
+ +G +A+ P + + KM+L GC IL++ A + + F P++++ ++ +
Sbjct: 1016 SPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFISPKDEKQNVEKAKA 1075
Query: 900 NFF------------QPEGDHLTLLTVYQAW 918
+ + DHL ++ Y W
Sbjct: 1076 SLMNENLDGSASTADNKQSDHLLMVIAYNKW 1106
>Os01g0767700 Similar to DEIH-box RNA/DNA helicase
Length = 1223
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 199/402 (49%), Gaps = 29/402 (7%)
Query: 632 QIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSLGRNVPELLIYAVYSAQPAEMQSKIF 691
+I + EG IL+FL G E+I+ + L ++ + L+ +++S P+ Q K+F
Sbjct: 573 KICVDSNEGAILVFLPGWEDINQTRERLLA--SPFFQDSSKFLVLSLHSMIPSSEQKKVF 630
Query: 692 EPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFAKLNVYNPKQGLDSLIITPISQASAK 751
+ P G RK++++TNIAE ++TID + +VID G K Y+P + +L + +S+A+A+
Sbjct: 631 KRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKANAR 690
Query: 752 QRAGRAGRTGPGKCYRLYTESAYR-NEMPPTTTPEIQRINLGETVLNMKAMGINDLLSFD 810
QR GRAGR PG CY LY S +R + PEI+R+ + E L +K + N ++ D
Sbjct: 691 QRQGRAGRCQPGTCYHLY--SRFRAASLLEYQIPEIKRMPIEELCLQVKLLDPNCRIA-D 747
Query: 811 F----MDPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRMAEFPQEPPLSKMLLASVDLG 866
F +DPP P+++ A+ L +LGAL ++ LT +G ++ P P SKMLL + +
Sbjct: 748 FLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGILMN 807
Query: 867 CSDEILTIIAMIQTGNIFYRP-----REKQAQADRKRGNFFQPEGDHLTLLTVYQAWKAK 921
C D LT+ + F P R++ A A + + + D L ++ W+
Sbjct: 808 CLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAMDCWRRA 867
Query: 922 QFSG---PWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVVSA------GNDLTKVRKA 972
+ G +C + FV ++ ++RKQL + + V A D +R
Sbjct: 868 KDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRAV 927
Query: 973 ITAGFF-----FHAARKDPQGGYRTIADHQQVYIHPASALFQ 1009
+ AG + RK+ + A +V +HP S F
Sbjct: 928 LMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPHSCNFN 969
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 125/208 (60%), Gaps = 17/208 (8%)
Query: 424 ILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEA--GYITRGKIAC 481
I++ R LPI K+ + + ++QV+++ GETG GKTTQV QY+ + G KI C
Sbjct: 199 IVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVC 258
Query: 482 TQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREIL---- 537
TQPRR++A SVA+R+S E G +G+ VGY IR + G ++ I + T+G+LLR ++
Sbjct: 259 TQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVT 318
Query: 538 -----------LDTDLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATL 586
D ++ + +++DE HER ++D + A+L+ L+ L+L++ SAT+
Sbjct: 319 NISKEQNQKRSFDDAVTGITHIIVDEIHERDRFSDFMLAILRDLLPLYPHLRLVLMSATI 378
Query: 587 DAEKFSGYFFDCNIFTIPGRTYPVEILY 614
DAE+FS YF C +PG T+PV+ Y
Sbjct: 379 DAERFSNYFSGCPFIQVPGFTHPVKTFY 406
>Os03g0282700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 404
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 209/425 (49%), Gaps = 51/425 (12%)
Query: 433 IFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIACTQPRRVAAESV 492
I+ ++E + D++V+VV GSGK++ + + LAE+GY G + C QPR +AA
Sbjct: 17 IYHQMPAILEYLEDHRVVVVSAAPGSGKSSVLPRCLAESGY---GPVLCAQPRHLAAFVA 73
Query: 493 AKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTD-LSSYSVVMLD 551
+V EE+ D+ I++ T LL L+ Y V++D
Sbjct: 74 MAKVGEEW--------------------DSDIEFTTTRQLLDRFSSPAPVLAGYGAVVID 113
Query: 552 EAHERTIYTDILFALLKKLIRRRTDL----KLIVTSATLDAEK-FSGYFFDCNIFTIPGR 606
EAH+RT+ TD+L ++K + T + K++V +A A+ S +F + +IP
Sbjct: 114 EAHDRTLGTDVLLGMVKAALATGTTMGGRCKVVVCTAGGPADGMLSAFFGGAPVVSIPRA 173
Query: 607 TYPVEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSL 666
+ VE+ YS+ P D A V+ IH ++P GD+L FL +I + + L
Sbjct: 174 AHQVEVRYSRGPVLDMAAAVADEVAAIHASQPPGDVLAFLPENADI------IGVHARLL 227
Query: 667 GRNVPELLIYAVYSAQPAEMQSKIF--EPTPPGKRKVVVATNIAEASITIDGIYYVIDPG 724
G VP L + V+ PAE+ + P P G+R+VV+AT++AE ++ + GI YV+D G
Sbjct: 228 GLPVPGLAVRYVHDNLPAELIDIMLINSPVPDGRRRVVLATDVAETAVLVHGITYVVDTG 287
Query: 725 FAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTTP 784
++ P + IS+ +A RA AG +GPG+C+RLY Y +++ T P
Sbjct: 288 L--VSEQPPVR---------ISKEAAAARAAIAGFSGPGRCHRLYQPEEY-DDLDEHTIP 335
Query: 785 EIQRINLG-ETVLNMKAMGINDLLSFDFMDPP-APQSLITAMEQLYNLGALDEEGLLTRV 842
I++ L +K + + F+ DP P L QL N G LD+ G L+
Sbjct: 336 HIRQDGAAVRFALMVKRHAADGIPGFEIFDPALEPAVLKNVFGQLVNGGYLDKLGNLSDK 395
Query: 843 GRRMA 847
G R A
Sbjct: 396 GEREA 400
>Os11g0196100
Length = 333
Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/285 (29%), Positives = 133/285 (46%), Gaps = 75/285 (26%)
Query: 449 VLVVIGETGSGKTTQVTQYLAEAGYITRGKIACTQPRRVAAESVAKRVSEEFGCRLGEEV 508
V++V G+GK++Q+ + L AG+ GC V
Sbjct: 11 VVLVDAGPGTGKSSQIPRLLHAAGH---------------------------GC----VV 39
Query: 509 GYSIRFDDHTG-PDTVIKYMTDGMLLREILLDTDLSSYSVVMLDEAHERTIYTDILFALL 567
GYS+ DD + DTV+KY+T G LLR++ D L+ Y V++D+AH+ T ++ + +
Sbjct: 40 GYSVPLDDRSSDADTVVKYITHGALLRDLAADPLLTRYGAVVVDDAHDGMAITGVVLSCV 99
Query: 568 KKLIRRRTDLKLIVT---SATLDAEKFSGYFFDCNI--FTIPGRTYP--VEILYSKQPES 620
K RR DL+++V +TL G+F + + RTY ++ Y +P +
Sbjct: 100 KAAAARRLDLRVVVCLNHYSTLCKGVVHGFFSGSGMDGKELWFRTYSGLIDQHYLPEPVT 159
Query: 621 DYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSLGRNVPELLIYAVYS 680
DY+ AA+ V +IH TEP GD+L+FL G +++ A L
Sbjct: 160 DYLGAAVDAVCRIHTTEPPGDLLVFLPGCTDVEAAEHAL--------------------- 198
Query: 681 AQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGF 725
G RKVV+AT++A S+ +DGI Y++D G+
Sbjct: 199 ---------------NGLRKVVLATDVAVCSVFVDGIKYIVDSGY 228
>Os01g0118100 Similar to Maleless protein
Length = 164
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%)
Query: 519 GPDTVIKYMTDGMLLREILLDTDLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLK 578
G DT + + T G+LLR +L+D +L + V++DE HER + D L +LK L+ RR +L+
Sbjct: 3 GRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELR 62
Query: 579 LIVTSATLDAEKFSGYFFDCNIFTIPGRTYPV 610
L++ SATL+AE FS YF + IPG TYPV
Sbjct: 63 LVLMSATLNAELFSSYFGGAPMIHIPGFTYPV 94
>Os01g0315300
Length = 243
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 17/98 (17%)
Query: 661 ERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYV 720
E+++ V EL+I +Y+ PAE+Q+KIFEP P G RKVV+ATNIA+A
Sbjct: 19 EKLQRANGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIADAETP------- 71
Query: 721 IDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAG 758
YNP+ ++S ++ P+S+ASA+QRA R+G
Sbjct: 72 ----------YNPRTAMESFLVAPVSRASAEQRACRSG 99
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 35,296,128
Number of extensions: 1449608
Number of successful extensions: 3327
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 3286
Number of HSP's successfully gapped: 17
Length of query: 1084
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 973
Effective length of database: 11,240,047
Effective search space: 10936565731
Effective search space used: 10936565731
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)