Os07g0508000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADR224Wp.
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Os07g0508000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ADR224Wp.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.32 | 0.143 | 12 | 0.565 | 0.0944 | 0.313 | 0.312 | 0.11 | 0.308 | 17.8 | 80.08 | 678 | -- | -- |
| 9.35 | 0.142 | 12 | 0.573 | 0.0915 | 0.308 | 0.287 | -- | 0.305 | 17.7 | 79.97 | 678 | -- | -- |
| 9.52 | 0.144 | 12 | 0.578 | 0.0919 | 0.31 | -- | -0.00894 | 0.314 | 18.1 | 80.45 | 680 | -- | -- |
| 9.51 | 0.144 | 12 | 0.574 | 0.0975 | 0.323 | -- | -- | 0.31 | 18.5 | 79.43 | 693 | -- | -- |
| 9.49 | 0.143 | 12 | 0.588 | -- | 0.332 | -- | -0.23 | 0.301 | -- | 66 | 1124 | -- | -- |
| 11.15 | 0.157 | 12 | 0.593 | 0.0902 | -- | 0.0343 | -- | 0.274 | 10.7 | -- | -- | -- | -- |
| 11.15 | 0.156 | 12 | 0.594 | 0.0904 | -- | -- | -- | 0.274 | 10.5 | -- | -- | -- | -- |
| 9.37 | 0.143 | 12 | 0.599 | -- | 0.333 | -- | -- | 0.308 | -- | 65.48 | 1136 | -- | -- |
| 17.91 | 0.197 | 12 | -- | 0.0966 | 0.399 | -- | -- | 0.271 | 19.8 | 84.08 | 722 | -- | -- |
| 11.65 | 0.16 | 12 | 0.593 | -- | -- | -- | -- | 0.273 | -- | -- | -- | -- | -- |
| 20.46 | 0.212 | 12.1 | -- | 0.0874 | -- | -- | -- | 0.208 | 9.99 | -- | -- | -- | -- |
| 17.63 | 0.196 | 12 | -- | -- | 0.457 | -- | -- | 0.3 | -- | 83 | 2095 | -- | -- |
| 20.92 | 0.213 | 12.1 | -- | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.14 | humidity | 60 | 720 | > th | dose dependent | sin | 13 | NA |
| 2 | 9.14 | humidity | 70 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 4 | 9.14 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 93 | 9.28 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 18 |
| 94 | 9.28 | humidity | 70 | 1440 | > th | dose dependent | rect. | 20 | 20 |
| 97 | 9.29 | humidity | 90 | 720 | > th | dose independent | rect. | 10 | 20 |
| 179 | 9.32 | humidity | 80 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 180 | 9.32 | humidity | 80 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 196 | 9.34 | humidity | 90 | 720 | > th | dose independent | sin | 14 | NA |
| 197 | 9.34 | humidity | 90 | 720 | > th | dose independent | rect. | 15 | 15 |
| 199 | 9.34 | humidity | 90 | 720 | < th | dose dependent | sin | 12 | NA |
| 230 | 9.35 | humidity | 80 | 720 | > th | dose dependent | no | NA | NA |
| 249 | 9.35 | humidity | 70 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 255 | 9.36 | humidity | 90 | 720 | > th | dose independent | rect. | 18 | 12 |
| 371 | 9.39 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 394 | 9.40 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 436 | 9.41 | humidity | 80 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 438 | 9.41 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 440 | 9.41 | humidity | 90 | 720 | > th | dose independent | rect. | 4 | 23 |
| 483 | 9.42 | humidity | 90 | 720 | < th | dose independent | rect. | 16 | 15 |
| 490 | 9.42 | humidity | 90 | 720 | > th | dose independent | rect. | 2 | 22 |
| 499 | 9.42 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 541 | 9.43 | humidity | 70 | 1440 | > th | dose dependent | sin | 3 | NA |
| 631 | 9.45 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 677 | 9.46 | humidity | 90 | 720 | > th | dose independent | no | NA | NA |
| 689 | 9.46 | humidity | 90 | 720 | > th | dose independent | rect. | 18 | 23 |
| 741 | 9.47 | humidity | 90 | 720 | < th | dose independent | sin | 13 | NA |
| 759 | 9.47 | humidity | 90 | 720 | > th | dose independent | rect. | 15 | 23 |
| 811 | 9.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 17 |
| 828 | 9.48 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 882 | 9.49 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 885 | 9.49 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 945 | 9.50 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 963 | 9.50 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 23 |