BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0508000 Os07g0508000|AK073417
(1280 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0508000 Similar to ADR224Wp 2358 0.0
Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA he... 663 0.0
Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA he... 608 e-174
Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA he... 511 e-144
Os01g0212100 ATP-dependent helicase, DEAH-box family protein 483 e-136
Os11g0310800 ATP-dependent helicase, DEAH-box family protein 477 e-134
Os03g0314100 Helicase, C-terminal domain containing protein 417 e-116
Os06g0192500 ATP-dependent helicase, DEAH-box family protein 303 8e-82
Os02g0736600 ATP-dependent helicase, DEAH-box family protein 194 5e-49
Os01g0767700 Similar to DEIH-box RNA/DNA helicase 132 2e-30
Os04g0432300 Double-stranded RNA binding domain containing ... 128 3e-29
Os03g0282700 DEAD/DEAH box helicase, N-terminal domain cont... 126 1e-28
Os11g0196100 103 9e-22
Os01g0118100 Similar to Maleless protein 93 1e-18
>Os07g0508000 Similar to ADR224Wp
Length = 1280
Score = 2358 bits (6112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1149/1280 (89%), Positives = 1149/1280 (89%)
Query: 1 MEGDMDATMTTLGPEDDTGAQGLILPSRDRVMYRPPPGKSALGLDLLAHRKREAEGGNAF 60
MEGDMDATMTTLGPEDDTGAQGLILPSRDRVMYRPPPGKSALGLDLLAHRKREAEGGNAF
Sbjct: 1 MEGDMDATMTTLGPEDDTGAQGLILPSRDRVMYRPPPGKSALGLDLLAHRKREAEGGNAF 60
Query: 61 KPPPQKVVAAATSIDEDEKPGPAESDEKSLSSGHRGSVSRRYRGANSDERTSFKEPTITD 120
KPPPQKVVAAATSIDEDEKPGPAESDEKSLSSGHRGSVSRRYRGANSDERTSFKEPTITD
Sbjct: 61 KPPPQKVVAAATSIDEDEKPGPAESDEKSLSSGHRGSVSRRYRGANSDERTSFKEPTITD 120
Query: 121 EDGRGPSPSHRDGSYRQDTHKXXXXXXXXXXXXXXRYDDYEDRGSRDKHGERERSASIGY 180
EDGRGPSPSHRDGSYRQDTHK RYDDYEDRGSRDKHGERERSASIGY
Sbjct: 121 EDGRGPSPSHRDGSYRQDTHKSRSSQGSHSRSTPRRYDDYEDRGSRDKHGERERSASIGY 180
Query: 181 SSSGRRGHHDDRESHNRRDERERSTSVDYMNKXXXXXXXXXXXXTPARSDWDSGRWEWED 240
SSSGRRGHHDDRESHNRRDERERSTSVDYMNK TPARSDWDSGRWEWED
Sbjct: 181 SSSGRRGHHDDRESHNRRDERERSTSVDYMNKRSRHEHSSRSSRTPARSDWDSGRWEWED 240
Query: 241 TPRREYRDDRSNSHRQHXXXXXXXXXXXXXXRLVSPWLGGNTPRYAASPWDNVSPSPAPI 300
TPRREYRDDRSNSHRQH RLVSPWLGGNTPRYAASPWDNVSPSPAPI
Sbjct: 241 TPRREYRDDRSNSHRQHPSPSPMLAAASPDARLVSPWLGGNTPRYAASPWDNVSPSPAPI 300
Query: 301 XXXXXXXXXXXXXXXXXXHQLTFSSTSASNDRESDRSPSDADGNYEISEEMMQEMDYNAD 360
HQLTFSSTSASNDRESDRSPSDADGNYEISEEMMQEMDYNAD
Sbjct: 301 RASGSSKGSSYPRSGGRSHQLTFSSTSASNDRESDRSPSDADGNYEISEEMMQEMDYNAD 360
Query: 361 RAWYDCEEHNTMFDGDNSMYLEDDSSYKKREAQLPKRLTRKDGSLMTLAQSKKLSQMTAD 420
RAWYDCEEHNTMFDGDNSMYLEDDSSYKKREAQLPKRLTRKDGSLMTLAQSKKLSQMTAD
Sbjct: 361 RAWYDCEEHNTMFDGDNSMYLEDDSSYKKREAQLPKRLTRKDGSLMTLAQSKKLSQMTAD 420
Query: 421 NAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRVVFTKQAEPVMPL 480
NAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRVVFTKQAEPVMPL
Sbjct: 421 NAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRVVFTKQAEPVMPL 480
Query: 481 KDPTSDMAIVARKGSALVREIREKQSMNKSRQRFWELAGSKLGNILGVEKTAEQVDADTA 540
KDPTSDMAIVARKGSALVREIREKQSMNKSRQRFWELAGSKLGNILGVEKTAEQVDADTA
Sbjct: 481 KDPTSDMAIVARKGSALVREIREKQSMNKSRQRFWELAGSKLGNILGVEKTAEQVDADTA 540
Query: 541 TVGDQGEIDFKEEAKFSQHMKVKAEAVSDFAKSKSLSQQRQYLPIFTVRDDLLQXXXXXX 600
TVGDQGEIDFKEEAKFSQHMKVKAEAVSDFAKSKSLSQQRQYLPIFTVRDDLLQ
Sbjct: 541 TVGDQGEIDFKEEAKFSQHMKVKAEAVSDFAKSKSLSQQRQYLPIFTVRDDLLQVVRENQ 600
Query: 601 XXXXXGETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKV 660
GETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKV
Sbjct: 601 VVVVVGETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKV 660
Query: 661 GYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILK 720
GYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILK
Sbjct: 661 GYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILK 720
Query: 721 KVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMFSKTPCEDYVEAAVK 780
KVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMFSKTPCEDYVEAAVK
Sbjct: 721 KVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMFSKTPCEDYVEAAVK 780
Query: 781 QAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPA 840
QAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPA
Sbjct: 781 QAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPA 840
Query: 841 DLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFP 900
DLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFP
Sbjct: 841 DLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFP 900
Query: 901 VSXXXXXXXXXXXXXXXXXXCYRLFTESAYQNEMLPNPVPEIQRTXXXXXXXXXXXXXXX 960
VS CYRLFTESAYQNEMLPNPVPEIQRT
Sbjct: 901 VSRAAADQRAGRAGRTGPGTCYRLFTESAYQNEMLPNPVPEIQRTNLGNVVLLLKSLKVE 960
Query: 961 XXXDFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQ 1020
DFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQ
Sbjct: 961 NLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQ 1020
Query: 1021 LECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYR 1080
LECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYR
Sbjct: 1021 LECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYR 1080
Query: 1081 GDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARL 1140
GDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARL
Sbjct: 1081 GDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARL 1140
Query: 1141 KGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAEL 1200
KGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAEL
Sbjct: 1141 KGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAEL 1200
Query: 1201 GPMFFSVKETDTSLLDHKKRQKEDKTAMEEEMEKXXXXXXXXXXXXXXXXXXXXXXXXXX 1260
GPMFFSVKETDTSLLDHKKRQKEDKTAMEEEMEK
Sbjct: 1201 GPMFFSVKETDTSLLDHKKRQKEDKTAMEEEMEKLRQEQAEAARLEKEREREKRAKQQQQ 1260
Query: 1261 VSMPGLKKGSTYLRPKRMGL 1280
VSMPGLKKGSTYLRPKRMGL
Sbjct: 1261 VSMPGLKKGSTYLRPKRMGL 1280
>Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1084
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/868 (41%), Positives = 522/868 (60%), Gaps = 59/868 (6%)
Query: 383 DDSSYKKREAQLPKRLTRKDGSLMTLAQSKKLSQMTADNAQWEDRQLLRSGAVRGTEVQT 442
D ++ +R + + +D T + + + +M++ +WE +QL+ SG + +
Sbjct: 226 DRAAATRRRTGVSGIVIPEDNQTGTASSRRPIRRMSSPE-RWEMKQLIASGVLNAKDYPA 284
Query: 443 EFDDEDERKV-----------ILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIVA 491
FDDED + + +++ +P FL G+ T PV +P ++ A
Sbjct: 285 -FDDEDSEGMNYQEEGVEEELEIELNEDEPAFLRGQGRSTIDVSPVRISTNPDGSLSRAA 343
Query: 492 RKGSALVREIREKQ---------SMNKSRQRFWE-----LAGSKLGNIL-GVEKTAEQVD 536
SAL++E R+ + S+ K R WE + G L L GV +AE +
Sbjct: 344 VLQSALIKEWRDIRNEDQRALVDSIPKDLNRPWEDPVPEVGGRYLAQELRGVGLSAESMP 403
Query: 537 ADTATVGDQGEIDFKEEAKFSQHMKVKAEAVSDFAKSKSLS--QQRQYLPIFTVRDDLLQ 594
++K+EA + V+ F ++ LS +QRQ LPIF ++++L++
Sbjct: 404 ------------EWKKEAY--------GKTVT-FGQTSRLSILEQRQSLPIFRLKNELIE 442
Query: 595 XXXXXXXXXXXGETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMET 654
GETGSGKTTQ+TQYL E GY T G + CTQPRRVAA SVAKRVSEE
Sbjct: 443 AVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIACTQPRRVAAESVAKRVSEEFGC 502
Query: 655 ELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDV 714
LG +VGY+IRF+D T P+T+IKYMTDG+LLRE L D DL Y V+++DEAHER++ TD+
Sbjct: 503 RLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTDLSSYSVVMLDEAHERTIYTDI 562
Query: 715 LFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMFSKTPCEDY 774
LF +LKK++ RR D KLIVTSATL+A+KFS +F +F IPGRT+PV I++SK P DY
Sbjct: 563 LFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNIFTIPGRTYPVEILYSKQPESDY 622
Query: 775 VEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPI 834
+ AA+ IH+T GDIL+F+TGQEEI+ C L ER++ L + VP+L I +
Sbjct: 623 MHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSL----GRNVPELLIYAV 678
Query: 835 YSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMD 894
YS PA++Q+KIF+ G RK +VATNIAE S+T+DGI+YVID G+ K+ VYNP+ G+D
Sbjct: 679 YSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFAKLNVYNPKQGLD 738
Query: 895 ALQVFPVSXXXXXXXXXXXXXXXXXXCYRLFTESAYQNEMLPNPVPEIQRTXXXXXXXXX 954
+L + P+S CYRL+TESAY+NEM P PEIQR
Sbjct: 739 SLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTTPEIQRINLGETVLNM 798
Query: 955 XXXXXXXXXDFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKM 1014
FDFMDPP ++++ +M QL+ LGAL+ G LT +G +M EFP +P L+KM
Sbjct: 799 KAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRMAEFPQEPPLSKM 858
Query: 1015 LLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQW 1074
LL L C DE+LTI++M+ ++F+RP+++ ++D R FF PE DHLTLL VY W
Sbjct: 859 LLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGNFFQPEGDHLTLLTVYQAW 918
Query: 1075 KSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYF 1134
K+ Q+ G WC ++F+ + LR+A++VR QLL+I+ K+ + S + VRKAI + +F
Sbjct: 919 KAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVVSAGNDLTKVRKAITAGFF 978
Query: 1135 HNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDP 1194
+AAR G Y + ++HP+SAL+ P++V+YHE+V+TTKEYM+ VTA+DP
Sbjct: 979 FHAARKDPQGGYRTIADHQQVYIHPASALF--QQQPEWVIYHEVVMTTKEYMREVTAIDP 1036
Query: 1195 QWLAELGPMFFSVKETDTSLLDHKKRQK 1222
+WL EL P F+ + D + + +KRQ+
Sbjct: 1037 RWLVELAPRFY--RSADPTKISKRKRQE 1062
>Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1070
Score = 608 bits (1569), Expect = e-174, Method: Compositional matrix adjust.
Identities = 311/645 (48%), Positives = 418/645 (64%), Gaps = 14/645 (2%)
Query: 575 SLSQQRQYLPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLTQYLHEDGYTTTG--IVG 632
+L +R+ LP++ ++DDLL+ GETGSGKTTQ+ QYLHE GYT G V
Sbjct: 396 TLQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVA 455
Query: 633 CTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDA 692
CTQPRRVAAMSVA RV+EEM +LGH+VGY+IRFED TS T+IKYMTDG+LLRE L +
Sbjct: 456 CTQPRRVAAMSVAARVAEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEP 515
Query: 693 DLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPV 752
DL Y V+V+DEAHER+L TD+LFG++K + R D KL+++SATLNADKFS FF PV
Sbjct: 516 DLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFSDFFDAAPV 575
Query: 753 FHIPGRTFPVNIMFSKTPCEDYVEAAVKQAMTIHITSGP--GDILIFMTGQEEIEATCYA 810
F IPGR F V I ++ P DY++AAV + +H+T P GDIL+F+TGQEEIE
Sbjct: 576 FRIPGRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEI 635
Query: 811 LAERLEQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTV 870
L RL L V +L I PIY+ LPA+LQAKIF+ A G RK ++ATNIAETSLT+
Sbjct: 636 LRHRLRVL----GGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTI 691
Query: 871 DGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLFTESAY 930
DGI YV+D G+ K+K YNPR GM++L V PVS C+RL+TE +
Sbjct: 692 DGIKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNF 751
Query: 931 QNEMLPNPVPEIQRTXXXXXXXXXXXXXXXXXXDFDFMDPPPQENILNSMYQLWVLGALN 990
+++ + VPEIQR+ FDFMDPPP E++L ++ +L+ LGALN
Sbjct: 752 VSDLDDDAVPEIQRSNLASVVLALKALGINDLVGFDFMDPPPAESLLRALEELFALGALN 811
Query: 991 NVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVP-SVFFRPKDRAEE 1049
+ G LT G +M EFPLDP L+K ++ E+ C +EV+TI +MLS +VF+RP+D+
Sbjct: 812 SRGELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVH 871
Query: 1050 SDAAREKFFVPES-DHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDIL 1108
+DAAR F + DH+ LLNVY W + Y WC + F+ + +R+AR+VR QL +L
Sbjct: 872 ADAARRAFHAGNAGDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALL 931
Query: 1109 KTLKI-PLTSC-HMEWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGL 1166
+ ++I P +S + D VRKA+ + YF +AARL+ G Y ++ +HPSS +
Sbjct: 932 ERVEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQRDGSYRAVKSRQTVFVHPSSGV--A 989
Query: 1167 GYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKETD 1211
P + +YHELVLTTKEYM+ VT + P+WL E+ P ++ K+ D
Sbjct: 990 QAPPRWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYERKDVD 1034
>Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 536
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/522 (47%), Positives = 346/522 (66%), Gaps = 8/522 (1%)
Query: 701 VMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTF 760
++DEAHER+++TDVLFG+LK+++ RR D +LIVTSATL+A+KFS +F +F IPGRTF
Sbjct: 1 MLDEAHERTIHTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 60
Query: 761 PVNIMFSKTPCEDYVEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLIS 820
PV I+++K P DY++AA+ + IH+T GDIL+F+TGQEEI+ C L ER++ L
Sbjct: 61 PVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKGL-- 118
Query: 821 SSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTG 880
K VP+L ILP+YS LP+++Q+KIF A G RK +VATNIAE SLT+DGI+YV+D G
Sbjct: 119 --GKDVPELIILPVYSALPSEMQSKIFDPAPPGKRKVVVATNIAEASLTIDGIYYVVDPG 176
Query: 881 YGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLFTESAYQNEMLPNPVP 940
+ K+ VYN + G+D+L + P+S CYRL+TESAY+NEM P +P
Sbjct: 177 FAKINVYNSKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIP 236
Query: 941 EIQRTXXXXXXXXXXXXXXXXXXDFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIGW 1000
EIQR FDFMDPP + ++++M QL+ LGAL+ G LT +G
Sbjct: 237 EIQRINLGSTVLNMKAMGINDLLSFDFMDPPAPQALISAMEQLYSLGALDEEGLLTKLGR 296
Query: 1001 KMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVP 1060
KM EFPLDP L+KMLL L C DE+LTI++M+ ++F+RP+++ ++D R KFF P
Sbjct: 297 KMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 356
Query: 1061 ESDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHM 1120
E DHLTLL VY WK+ + G WC ++F+ + LR+A++VR QLL I+ K+ + S
Sbjct: 357 EGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGR 416
Query: 1121 EWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVL 1180
+ +RKAI + +F +AAR Y P ++HPSSAL+ PD+V+YHELV+
Sbjct: 417 NFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYHELVM 474
Query: 1181 TTKEYMQCVTAVDPQWLAELGPMFFSVKETDTSLLDHKKRQK 1222
TTKEYM+ VT +DP+WL EL P F+ K D + + +KRQ+
Sbjct: 475 TTKEYMREVTVIDPKWLTELAPRFY--KSADPTKMSKRKRQE 514
>Os01g0212100 ATP-dependent helicase, DEAH-box family protein
Length = 700
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/663 (39%), Positives = 380/663 (57%), Gaps = 29/663 (4%)
Query: 575 SLSQQRQYLPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLTQYLHEDGYTTTG-IVGC 633
SL +QRQ LP++ R +L GETGSGK+TQ+ QYL E G+ G ++GC
Sbjct: 43 SLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKSTQIPQYLKEAGWAEGGRLIGC 102
Query: 634 TQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPN-TIIKYMTDGVLLRETLKDA 692
TQPRR+A SVA RV+EE+ LG +VGY IRFED T+P T+IK++TDGVL+RE ++D
Sbjct: 103 TQPRRLAVQSVASRVAEEVGVRLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDP 162
Query: 693 DLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFG---- 748
L KY VI++DEAHERS++TD+L G+LKK+ RR D +LI++SAT+ A S FF
Sbjct: 163 LLTKYSVIMVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEARSMSTFFNIRRK 222
Query: 749 --------GVP-----VFHIPGRTFPVNIMFSKTPCEDYVEAAVKQAMTIHITSGPGDIL 795
+P + + G+ + V I + + P DY++AAV + IH PGDIL
Sbjct: 223 NSMLESADHLPNPEPAILSVEGKGYTVEIHYVEEPVSDYLQAAVNTVLIIHEKEPPGDIL 282
Query: 796 IFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTR 855
+F+TGQ++I+A L E ++ + L ILP+YS LP Q IF +G R
Sbjct: 283 VFLTGQDDIDAAVKMLNEEIQH----RGRHYLDLLILPLYSGLPRGDQDLIFTPTSKGKR 338
Query: 856 KCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXX 915
K +++TNIAETSLT++G+ YV+D+G+ K K YNP +++L V P+S
Sbjct: 339 KVVISTNIAETSLTLEGVVYVVDSGFSKQKCYNPISDIESLVVAPISKASARQRAGRAGR 398
Query: 916 XXXXXCYRLFTESAYQNEMLPNPVPEIQRTXXXXXXXXXXXXXXXXXXDFDFMDPPPQEN 975
C+RL+TE Y EM P +PE+QR+ FD+ P E
Sbjct: 399 VRPGKCFRLYTEEFYLKEMQPEGIPEMQRSNLVSCITQLKALGIDNILGFDWPASPSPEA 458
Query: 976 ILNSMYQLWVLGALNNVGALTV-IGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSML 1034
++ ++ L+ LG L+ LTV +G+++ E PLDP ++KM+L C DE+LTI + L
Sbjct: 459 MIRALEVLYSLGILDEDAKLTVPLGFQVAEIPLDPMISKMILSANNFGCSDEILTIAAFL 518
Query: 1035 SVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGL 1094
SV SV+ + +E D A+ +F E DH+T LN+Y + + WC +FL+ + L
Sbjct: 519 SVQSVWVSMRGVKKEFDEAKLRFAAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQAL 578
Query: 1095 RKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARLKGV---GEYVNCRN 1151
+K ++R QL+ I+K IPLTSC + + VRKAI + F A L+ G Y R
Sbjct: 579 KKVIDIREQLVRIIKRFGIPLTSCDRDMEAVRKAIIAGAFAYACHLEEYSQNGMYKTIRT 638
Query: 1152 GMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKETD 1211
++HPSS L+ + P +V+Y LV T K YM+ V A++P WL E P F+ + +
Sbjct: 639 SQEVYIHPSSVLFRV--NPKWVIYQSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFRTPN 696
Query: 1212 TSL 1214
+L
Sbjct: 697 PAL 699
>Os11g0310800 ATP-dependent helicase, DEAH-box family protein
Length = 708
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/668 (38%), Positives = 388/668 (58%), Gaps = 27/668 (4%)
Query: 583 LPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAM 642
LPI D+++ GETGSGK+TQL+Q LH GYT G + TQPRRVAA+
Sbjct: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPRRVAAV 74
Query: 643 SVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVM 702
SV++RV++E+ LG +VGYAIRFED TS T IKY+TDGVLLRE+L D +L +Y VI++
Sbjct: 75 SVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVIIL 134
Query: 703 DEAHERSLNTDVLFGILKKVVA-RRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFP 761
DEAHERSLNTD+L G++K+++ R D K+++TSATL+ K SKFF G PV +IPG FP
Sbjct: 135 DEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLFP 194
Query: 762 VNIMFSKTPCEDYVEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISS 821
V +S +Y+E++++ A+ IH+ PGD+LIFMTG+++I+ L ER++ L
Sbjct: 195 VEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEEG 254
Query: 822 STKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGY 881
S +LP++ LP + Q ++F A R+ IVATN+AETSLTVDG+ +VID GY
Sbjct: 255 SCMDA---LVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGY 311
Query: 882 GKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLFTESAYQNEMLPNPVPE 941
K + YNP GM +L V +S CYRL+ S YQ E L +PE
Sbjct: 312 VKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPE 371
Query: 942 IQRTXXXXXXXXXXXXXX--XXXXDFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIG 999
IQR+ FDF+DPP +E++ +++ QL+++ A++ G +T +G
Sbjct: 372 IQRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVG 431
Query: 1000 WKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV 1059
M E PL+P+L++ L+ +L CL + LT+ ++LS + FR R+++ + R++ +
Sbjct: 432 RIMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSA-EITFR-STRSKDMEGKRKRQEL 489
Query: 1060 PE----SDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPL 1115
P+ DH+ LL ++ W Y WC+DH L V+G++ +++VR+QL I++ +
Sbjct: 490 PDGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGS 549
Query: 1116 TSCHM--------EWDVVRKAICSAYFHNAAR--LKGVGEYVNCRNGMPCHLHPSSALYG 1165
T ++ +R+A+C Y + A L G + +HP S L G
Sbjct: 550 TDVQAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEG 609
Query: 1166 --LGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKETDTSLLDHKKRQKE 1223
G P YVVYHEL+ TT+ +M+ V+AVD W+ P+ ++ D + L +
Sbjct: 610 DEYGKLPVYVVYHELINTTRPFMRNVSAVDQSWVK---PILKKLERLDMNKLSGGSSGSK 666
Query: 1224 DKTAMEEE 1231
D +E++
Sbjct: 667 DPEPLEDK 674
>Os03g0314100 Helicase, C-terminal domain containing protein
Length = 564
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/473 (44%), Positives = 305/473 (64%), Gaps = 12/473 (2%)
Query: 571 AKSKSLSQQRQYLPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLTQYLHE-DGYTTTG 629
A+ + ++R+ LP++ +DD L GETGSGKTTQ+ Q++ E +G +
Sbjct: 53 ARYLEILEKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRS 112
Query: 630 IVGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETL 689
+V CTQPRRVAAMSV++RV+EEM+ +G +VGY+IRFED +S T++KY+TDG+LLRE +
Sbjct: 113 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAM 172
Query: 690 KDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGG 749
D L++Y+VIV+DEAHER+L TDVLFG+LK+V+ R D KL+V SATL A+KF +F G
Sbjct: 173 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQTYFSG 232
Query: 750 VPVFHIPGRTFPVNIMFSKTPCEDYVEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCY 809
P+ +PGR PV I +++ P DY+EAA++ + IH+ GDIL+F+TG+EEIE C
Sbjct: 233 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDAC- 291
Query: 810 ALAERLEQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKA----EEG---TRKCIVATN 862
++ + I++ V + ++P+YS LP +Q KIF+ A EG RK +V+TN
Sbjct: 292 ---RKINKEINNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPAPSREGGPAGRKIVVSTN 348
Query: 863 IAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 922
IAETSLT+DGI YVID G+ K KVYNPR+ +++L V P+S C+
Sbjct: 349 IAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCF 408
Query: 923 RLFTESAYQNEMLPNPVPEIQRTXXXXXXXXXXXXXXXXXXDFDFMDPPPQENILNSMYQ 982
RL+TE ++ +++ P PEI R+ FDFMDPP E ++ ++
Sbjct: 409 RLYTEKSFNDDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEV 468
Query: 983 LWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLS 1035
L LGAL++ G LT +G M EFPLDP ++KML++ + C +E+L+I +MLS
Sbjct: 469 LNYLGALDDDGNLTPLGETMSEFPLDPQMSKMLVISPKYNCSNEILSISAMLS 521
>Os06g0192500 ATP-dependent helicase, DEAH-box family protein
Length = 386
Score = 303 bits (775), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 217/352 (61%), Gaps = 36/352 (10%)
Query: 583 LPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLTQYLHEDGYTTTG-IVGCTQPRRVAA 641
LPI +V L++ GETGSGKTTQL Q+L++ G+ G ++G TQPRRVAA
Sbjct: 31 LPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYDAGFCQDGKVIGITQPRRVAA 90
Query: 642 MSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIV 701
++VAKRV+EE +LG KVGY+IRF+D TS T IKYMTDG+LLRE L D L KY VIV
Sbjct: 91 VTVAKRVAEECNDQLGKKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYSVIV 150
Query: 702 MDEAHERSLNTDVLFGILKKVVARRRDF-------------------------------K 730
+DEAHER+++TDVL G+LKKV R + K
Sbjct: 151 VDEAHERTVHTDVLLGLLKKVQHSRSIYANKNGKILPDIQHQSQYFTLKACQGTKIDPLK 210
Query: 731 LIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMFSKTPCEDYVEAAVKQAMTIHITSG 790
LI+ SA+L+A FS +FG HI GR +PV+I+++ P DY++A + IH+ G
Sbjct: 211 LIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDILYTYQPESDYLDATLVTIFQIHLEEG 270
Query: 791 PGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKA 850
PGDIL F+TGQEEIE+ + ER QL + K+ PIYS LP++ Q F+ A
Sbjct: 271 PGDILAFLTGQEEIESLDRLIQERARQLPPQRS----KIWTTPIYSSLPSEQQMNAFKPA 326
Query: 851 EEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVS 902
GTRK ++ATNIAETS+T+ GI YVID G K + YNP GM++L + PVS
Sbjct: 327 PAGTRKVVLATNIAETSVTIPGIKYVIDPGMVKARAYNPVTGMESLIIIPVS 378
>Os02g0736600 ATP-dependent helicase, DEAH-box family protein
Length = 1272
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 160/293 (54%), Gaps = 33/293 (11%)
Query: 567 VSDFAKSKSLSQQRQYLPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLTQYLHEDGYT 626
V ++ + + R+ LPI + ++++ GETG GKTTQ+ Q+L+E G+
Sbjct: 224 VVPVSRPHEVEKTRRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFG 283
Query: 627 TT------GIVGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMT 680
T+ GI+G TQPRRVA ++ A+RVS E+ +LG +VG+ +R + M IK+MT
Sbjct: 284 TSNRSDRKGIIGITQPRRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMT 343
Query: 681 DGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRR------------- 727
DG+LLRE D L +Y VI++DEAHERSLNTD+L G+L +++ R+
Sbjct: 344 DGILLREVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRIIKIRKSLYIEQQEKIRCG 403
Query: 728 ----------DFKLIVTSATLNADKF---SKFFGGV-PVFHIPGRTFPVNIMFSKTPCED 773
K+++ SATL F + F + P +P R FPV + FSK+ +D
Sbjct: 404 LSINPEDKISQLKVVLMSATLQLKDFISNRRLFDVIPPAIKVPVRQFPVTVHFSKSTHDD 463
Query: 774 YVEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTV 826
Y+ A K+ M+IH G IL+F+TGQ E++ C L +Q T+ V
Sbjct: 464 YLGQAYKKVMSIHKKLPQGGILVFVTGQREVDYLCKKLQRASKQQTDKKTEKV 516
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 197/460 (42%), Gaps = 107/460 (23%)
Query: 828 KLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 887
KL +LP+Y+ LPA Q ++FQ +G R +VATN+AETSLT+ GI YV+DTG K+K Y
Sbjct: 656 KLRVLPLYAMLPASQQLRVFQDIPDGERLVVVATNVAETSLTIPGIKYVVDTGKQKVKNY 715
Query: 888 NPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLFTESAY-QNEMLPN-PVPEIQRT 945
N GM + ++ +S CY L++ +AY ++E+ P PEI+
Sbjct: 716 NHATGMASYEIQWISKASASQRSGRAGRTGPGHCYHLYSAAAYGKDELFPEFSEPEIKNI 775
Query: 946 XXXXXXXXXXXXXXXXXXDFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIGWKMVEF 1005
+F F PP +E+++ + L VL AL++ G T++G M ++
Sbjct: 776 PVDGVVLMLKFMNINKVENFPFPTPPDKESLVEAERCLKVLEALDSKGEPTLMGKAMAQY 835
Query: 1006 PLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRP---------------------- 1043
P+ P +++L LTIV +L+ F RP
Sbjct: 836 PMSPRHSRLL------------LTIVKILNSQRCFSRPNFILGYAAAAASALSFTNPFLT 883
Query: 1044 -----------------KDRAEESDA---------AREKFFVPESDHLTLLNVYLQWKSN 1077
KDR E A KF P SD L++ ++ +
Sbjct: 884 QNEFSGESKQDNPDSEDKDRQERKRQKKLKAMVREAHTKFSNPSSDALSISRALQLFELS 943
Query: 1078 QYRGDWCNDHFLHVKGLRKAREVRSQLLDIL--------------------------KTL 1111
+ ++C + LH+K + + ++R QLL ++ ++
Sbjct: 944 ENPVEFCRVNSLHLKTMEEMSKLRKQLLRLIFHHSKFCEEFSWKFGVSEDVEEAWRHESD 1003
Query: 1112 KIPLTSCHMEWDVVRKAICSAYFHNAA--------------RLKGVGEYVNCRNGMPCHL 1157
K P+ E +++ + IC+ + A +++ V Y +C +L
Sbjct: 1004 KKPMQL--NEEELLGQGICAGWADRVAKRIRAFPGPSKDDKKVRAV-HYQSCAFNDTIYL 1060
Query: 1158 HPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWL 1197
H SS++ + P++VVY EL+ T + YM VT+V P W+
Sbjct: 1061 HRSSSVARIA--PEFVVYSELLHTKRSYMHGVTSVKPGWI 1098
>Os01g0767700 Similar to DEIH-box RNA/DNA helicase
Length = 1223
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 33/420 (7%)
Query: 785 IHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPADLQA 844
I + S G IL+F+ G E+I T ERL L S + K +L ++S +P+ Q
Sbjct: 574 ICVDSNEGAILVFLPGWEDINQT----RERL--LASPFFQDSSKFLVLSLHSMIPSSEQK 627
Query: 845 KIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSXX 904
K+F++ G+RK I++TNIAET++T+D + +VID+G K K Y+P + L VS
Sbjct: 628 KVFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKA 687
Query: 905 XXXXXXXXXXXXXXXXCYRLFTESAYQNEMLPNPVPEIQRT-XXXXXXXXXXXXXXXXXX 963
CY L++ + +L +PEI+R
Sbjct: 688 NARQRQGRAGRCQPGTCYHLYSRFRAAS-LLEYQIPEIKRMPIEELCLQVKLLDPNCRIA 746
Query: 964 DF--DFMDPPPQENILNSMYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQL 1021
DF +DPP E + N++ L LGAL LT +G K+ P+ P+ +KMLL G +
Sbjct: 747 DFLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGILM 806
Query: 1022 ECLDEVLTIVSMLSVPSVFFRP-----KDRAEESDAAREKFFVPESDHLTLLNVYLQWKS 1076
CLD LT+ F P + RA + + SD L ++ W+
Sbjct: 807 NCLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAMDCWRR 866
Query: 1077 NQYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKT---LKIPLTSCHMEW---DVVRK 1127
+ RG +C+ +F+ + +R QL + L + + ++C + ++R
Sbjct: 867 AKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRA 926
Query: 1128 AICSAYFHNAARL-----KGVGEYVNCRNGMPCHLHPSSALYGLGYTPD----YVVYHEL 1178
+ + + RL + +G LHP S + L + V+Y E+
Sbjct: 927 VLMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPHSCNFNLSFRKTSGNPLVIYDEI 986
Score = 130 bits (328), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 117/226 (51%), Gaps = 17/226 (7%)
Query: 558 QHMKVKAEAVSDFAKSKSLSQQRQYLPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLT 617
+ +++ A V+ + + + Q R LPI + +D + GETG GKTTQ+
Sbjct: 181 KKVEMLASKVNKSEQLRKIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVP 240
Query: 618 QYL--HEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTI 675
QY+ H G + + CTQPRR++A+SVA+R+S E +G VGY IR E N+
Sbjct: 241 QYILDHMWGKGESCKIVCTQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSS 300
Query: 676 IKYMTDGVLLRETLK---------------DADLDKYRVIVMDEAHERSLNTDVLFGILK 720
I + T+GVLLR + D + I++DE HER +D + IL+
Sbjct: 301 IMFCTNGVLLRLLIGRVTNISKEQNQKRSFDDAVTGITHIIVDEIHERDRFSDFMLAILR 360
Query: 721 KVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMF 766
++ +L++ SAT++A++FS +F G P +PG T PV +
Sbjct: 361 DLLPLYPHLRLVLMSATIDAERFSNYFSGCPFIQVPGFTHPVKTFY 406
>Os04g0432300 Double-stranded RNA binding domain containing protein
Length = 1114
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 23/209 (11%)
Query: 578 QQRQYLPIFTVRDDLLQXXXXXXXXXXXGETGSGKTTQLTQYLHED-------GYTTTGI 630
+ R LPI +D LQ GETG GKTTQ+ Q++ +D GY +
Sbjct: 584 EARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESELGGYCS--- 640
Query: 631 VGCTQPRRVAAMSVAKRVSEE-METELGHK---VGYAIRFEDMTSPNTIIKYMTDGVLLR 686
+ CTQPRR+AA+SVA+RVS E E+ G K VGY +R + + T + + T G+LLR
Sbjct: 641 IVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKLLFCTTGILLR 700
Query: 687 ETLKDADLDKYRVIVMDEAHERSL----NTDVLFGILKKVVARR-----RDFKLIVTSAT 737
+ + DL +V+DE HER++ D F + + +V +R R K+I+ SAT
Sbjct: 701 KLSGNNDLSDVTHVVVDEVHERTILRKSMNDPDFPVFRSLVEKRSNQPGRKLKVILMSAT 760
Query: 738 LNADKFSKFFGGVPVFHIPGRTFPVNIMF 766
+++ F+++FG PV ++ GRT PV+ F
Sbjct: 761 VDSSLFARYFGDCPVINVEGRTHPVSSHF 789
>Os03g0282700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 404
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 138/280 (49%), Gaps = 41/280 (14%)
Query: 609 GSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFED 668
GSGK++ L + L E GY G V C QPR +AA +V EE +++
Sbjct: 41 GSGKSSVLPRCLAESGY---GPVLCAQPRHLAAFVAMAKVGEEWDSD------------- 84
Query: 669 MTSPNTIIKYMTDGVLL-RETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRR 727
I++ T LL R + L Y +V+DEAH+R+L TDVL G++K +A
Sbjct: 85 -------IEFTTTRQLLDRFSSPAPVLAGYGAVVIDEAHDRTLGTDVLLGMVKAALATGT 137
Query: 728 DF----KLIVTSATLNADK-FSKFFGGVPVFHIPGRTFPVNIMFSKTPCEDYVEAAVKQA 782
K++V +A AD S FFGG PV IP V + +S+ P D A +
Sbjct: 138 TMGGRCKVVVCTAGGPADGMLSAFFGGAPVVSIPRAAHQVEVRYSRGPVLDMAAAVADEV 197
Query: 783 MTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPADL 842
IH + PGD+L F+ +I + RL L VP L++ ++ LPA+L
Sbjct: 198 AAIHASQPPGDVLAFLPENADI----IGVHARLLGL------PVPGLAVRYVHDNLPAEL 247
Query: 843 --QAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTG 880
I +G R+ ++AT++AET++ V GI YV+DTG
Sbjct: 248 IDIMLINSPVPDGRRRVVLATDVAETAVLVHGITYVVDTG 287
>Os11g0196100
Length = 333
Score = 103 bits (257), Expect = 9e-22, Method: Composition-based stats.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 79/281 (28%)
Query: 609 GSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFED 668
G+GK++Q+ + LH G+ GC VGY++ +D
Sbjct: 19 GTGKSSQIPRLLHAAGH------GCV-------------------------VGYSVPLDD 47
Query: 669 MTS-PNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRR 727
+S +T++KY+T G LLR+ D L +Y +V+D+AH+ T V+ +K ARR
Sbjct: 48 RSSDADTVVKYITHGALLRDLAADPLLTRYGAVVVDDAHDGMAITGVVLSCVKAAAARRL 107
Query: 728 DFKLIVT---SATLNADKFSKFFGGVPV--FHIPGRTFP--VNIMFSKTPCEDYVEAAVK 780
D +++V +TL FF G + + RT+ ++ + P DY+ AAV
Sbjct: 108 DLRVVVCLNHYSTLCKGVVHGFFSGSGMDGKELWFRTYSGLIDQHYLPEPVTDYLGAAVD 167
Query: 781 QAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPA 840
IH T PGD+L+F+ G ++EA +AL
Sbjct: 168 AVCRIHTTEPPGDLLVFLPGCTDVEAAEHAL----------------------------- 198
Query: 841 DLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGY 881
G RK ++AT++A S+ VDGI Y++D+GY
Sbjct: 199 -----------NGLRKVVLATDVAVCSVFVDGIKYIVDSGY 228
>Os01g0118100 Similar to Maleless protein
Length = 164
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%)
Query: 669 MTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRD 728
M +T + + T GVLLR L D +L +++DE HER +N D L +LK ++ RR +
Sbjct: 1 MKGRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPE 60
Query: 729 FKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMF 766
+L++ SATLNA+ FS +FGG P+ HIPG T+PV F
Sbjct: 61 LRLVLMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRF 98
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 41,115,805
Number of extensions: 1696882
Number of successful extensions: 4984
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 4921
Number of HSP's successfully gapped: 16
Length of query: 1280
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1168
Effective length of database: 11,187,833
Effective search space: 13067388944
Effective search space used: 13067388944
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 162 (67.0 bits)