Os01g0118100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Maleless protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0118100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Maleless protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.94 | 0.282 | 11.3 | 0.812 | 0.757 | 0.0528 | 0.146 | 2.88 | -0.124 | 10.6 | 14.46 | 3808 | -- | -- |
| 43.18 | 0.306 | 11.4 | 0.239 | 0.748 | -0.089 | 0.00214 | -- | -0.271 | 10.5 | 5.612 | 47520 | -- | -- |
| 36.02 | 0.28 | 11.3 | 0.811 | 0.755 | 0.0451 | -- | 2.85 | -0.124 | 10.6 | 14.54 | 3783 | -- | -- |
| 43.09 | 0.306 | 11.4 | 0.243 | 0.738 | -0.105 | -- | -- | -0.268 | 10.5 | 8.103 | 23883 | -- | -- |
| 69.38 | 0.39 | 11.4 | 0.307 | -- | 0.541 | -- | 2.03 | -0.311 | -- | 13.67 | 3626 | -- | -- |
| 43.26 | 0.308 | 11.4 | 0.146 | 0.749 | -- | 0.00541 | -- | -0.308 | 10.6 | -- | -- | -- | -- |
| 43.26 | 0.308 | 11.4 | 0.146 | 0.749 | -- | -- | -- | -0.308 | 10.6 | -- | -- | -- | -- |
| 72.89 | 0.399 | 11.5 | 0.0274 | -- | 0.58 | -- | -- | -0.389 | -- | 13.67 | 3626 | -- | -- |
| 43.57 | 0.307 | 11.5 | -- | 0.75 | 0.0811 | -- | -- | -0.348 | 10.6 | 4.785 | 47520 | -- | -- |
| 77.75 | 0.412 | 11.5 | 0.133 | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
| 43.83 | 0.31 | 11.4 | -- | 0.748 | -- | -- | -- | -0.324 | 10.5 | -- | -- | -- | -- |
| 70.62 | 0.393 | 11.5 | -- | -- | 0.58 | -- | -- | -0.341 | -- | 25.7 | 47520 | -- | -- |
| 78.21 | 0.413 | 11.5 | -- | -- | -- | -- | -- | -0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.10 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 3 | 34.16 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 8 | 34.21 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 11 | 34.23 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 101 | 34.73 | wind | 9 | 43200 | < th | dose independent | sin | 11 | NA |
| 106 | 34.73 | wind | 7 | 43200 | > th | dose dependent | sin | 11 | NA |
| 107 | 34.74 | wind | 7 | 43200 | > th | dose independent | sin | 11 | NA |
| 115 | 34.75 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 119 | 34.76 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 122 | 34.77 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 164 | 34.86 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 280 | 35.13 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 284 | 35.13 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 331 | 35.22 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 393 | 35.32 | temperature | 15 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 419 | 35.37 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 437 | 35.40 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 462 | 35.44 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 468 | 35.45 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 482 | 35.47 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 501 | 35.48 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 522 | 35.49 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 526 | 35.50 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 614 | 35.60 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 668 | 35.65 | temperature | 20 | 14400 | > th | dose independent | sin | 15 | NA |
| 695 | 35.67 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 728 | 35.69 | temperature | 15 | 4320 | > th | dose dependent | rect. | 9 | 15 |
| 760 | 35.71 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 10 | 15 |
| 828 | 35.75 | temperature | 15 | 4320 | > th | dose dependent | sin | 18 | NA |
| 838 | 35.76 | temperature | 20 | 14400 | < th | dose independent | sin | 15 | NA |
| 868 | 35.77 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 953 | 35.81 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 18 | NA |