BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0118100 Os01g0118100|J090032O21
(164 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01130.1 | chr2:88847-94635 REVERSE LENGTH=1114 210 3e-55
AT1G48650.2 | chr1:17989517-17995169 REVERSE LENGTH=1207 209 5e-55
AT5G04895.1 | chr5:1428796-1434516 FORWARD LENGTH=1162 196 4e-51
AT2G35920.1 | chr2:15075674-15080506 FORWARD LENGTH=996 120 4e-28
AT2G30800.1 | chr2:13120585-13126635 REVERSE LENGTH=1300 95 2e-20
AT1G06670.1 | chr1:2040567-2047333 FORWARD LENGTH=1577 94 2e-20
AT1G58060.1 | chr1:21489480-21501775 REVERSE LENGTH=1460 94 3e-20
AT1G58050.1 | chr1:21478590-21487839 REVERSE LENGTH=1418 91 4e-19
AT5G13010.1 | chr5:4122747-4128660 FORWARD LENGTH=1256 63 9e-11
AT2G47250.1 | chr2:19399923-19402981 REVERSE LENGTH=730 55 1e-08
AT3G62310.1 | chr3:23057516-23060561 REVERSE LENGTH=727 55 2e-08
AT1G27900.1 | chr1:9715615-9720346 REVERSE LENGTH=701 55 2e-08
AT3G26560.1 | chr3:9750122-9753719 REVERSE LENGTH=1169 54 5e-08
AT1G32490.1 | chr1:11742356-11749286 REVERSE LENGTH=1045 53 6e-08
AT2G35340.1 | chr2:14872728-14879615 FORWARD LENGTH=1045 51 3e-07
AT4G16680.1 | chr4:9388613-9390774 REVERSE LENGTH=657 49 1e-06
AT4G01020.1 | chr4:439086-445043 FORWARD LENGTH=1788 49 1e-06
AT5G10370.1 | chr5:3261245-3267188 FORWARD LENGTH=1776 48 3e-06
>AT2G01130.1 | chr2:88847-94635 REVERSE LENGTH=1114
Length = 1113
Score = 210 bits (534), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 113/144 (78%)
Query: 1 MKGRDTRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 60
+KGRDTRLLFCTTG DRNL+GVTHVIVDEIHERGMNEDFLLI+
Sbjct: 310 VKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSE 369
Query: 61 XXXXXMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLTPYNQIDDYG 120
MSATL+AELFSSYFGGA +I+IPGFTYPVRS FLEDILE+T +RLTPYNQIDDYG
Sbjct: 370 LKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYG 429
Query: 121 QEKSWKMQKQALRKRKSQIASVVE 144
QE++WKM KQ +KRKSQI VVE
Sbjct: 430 QERTWKMNKQIPKKRKSQITFVVE 453
>AT1G48650.2 | chr1:17989517-17995169 REVERSE LENGTH=1207
Length = 1206
Score = 209 bits (532), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 113/145 (77%), Gaps = 1/145 (0%)
Query: 1 MKGRDTRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 60
M+GRDTRLLFCTTG DR+LKGVTHV+VDEIHERGMNEDFLLIV
Sbjct: 389 MRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPD 448
Query: 61 XXXXXMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLTPYNQIDDYG 120
MSATLNAELFSSYFGGAP +HIPGFTYPVR+ FLED LE +G+RLT YNQIDDYG
Sbjct: 449 LKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYG 508
Query: 121 QEKSWKMQKQA-LRKRKSQIASVVE 144
+EK+WKMQKQA +KRKS I+S VE
Sbjct: 509 EEKTWKMQKQAQFKKRKSLISSAVE 533
>AT5G04895.1 | chr5:1428796-1434516 FORWARD LENGTH=1162
Length = 1161
Score = 196 bits (499), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 112/145 (77%), Gaps = 1/145 (0%)
Query: 1 MKGRDTRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 60
M+G++T LLFCT+G DRNL GVTHV VDEIHERGMNEDFL+IV
Sbjct: 350 MRGKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPD 409
Query: 61 XXXXXMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLTPYNQIDDYG 120
MSATLNAELFS+Y+GGAP IHIPGFT+PV++ FLED+LEITG++LT +NQ+DDYG
Sbjct: 410 LRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYG 469
Query: 121 QEKSWKMQKQAL-RKRKSQIASVVE 144
QEK+WK QKQ + RKRK+QI ++VE
Sbjct: 470 QEKTWKTQKQLMPRKRKNQITTLVE 494
>AT2G35920.1 | chr2:15075674-15080506 FORWARD LENGTH=996
Length = 995
Score = 120 bits (300), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 79/126 (62%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
TRLLFCTTG D NL V+H++VDEIHERGMNEDFLLI+
Sbjct: 323 TRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLIL 382
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLTPYNQIDDYGQEKSW 125
MSAT+NA++FS+YFG +P +HIPGFT+PV FLED+LE + + + + + G +
Sbjct: 383 MSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGR 442
Query: 126 KMQKQA 131
+ + ++
Sbjct: 443 RRESES 448
>AT2G30800.1 | chr2:13120585-13126635 REVERSE LENGTH=1300
Length = 1299
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 3 GRDTRLLFCTTGXXXXXXXXDRNLKGV---THVIVDEIHERGMNEDFLLIVXXXXXXXXX 59
GR + ++FCT G ++ V TH+IVDEIHER DF+L +
Sbjct: 278 GRHSSVVFCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNP 337
Query: 60 XXXXXXMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEI 105
MSATL+AE FS YFGG P++ +PGFTYPVR+ +LED+L I
Sbjct: 338 HLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSI 383
>AT1G06670.1 | chr1:2040567-2047333 FORWARD LENGTH=1577
Length = 1576
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 3 GRDTRLLFCTTGXXXXX---XXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXX 59
GR++ ++FCT G + ++ +TH+IVDEIHER DF+L++
Sbjct: 308 GRESSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNP 367
Query: 60 XXXXXXMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEI 105
MSATL+AE FS YFGG P++ +PGFTYPVR+ FL+D L +
Sbjct: 368 HLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSV 413
>AT1G58060.1 | chr1:21489480-21501775 REVERSE LENGTH=1460
Length = 1459
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXX------ 59
TRLLFCTTG DR L VTH+IVDE+HER + DFLLI+
Sbjct: 713 TRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSR 772
Query: 60 XXXXXXMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLTP 112
MSAT++A+LFS YFG P+I G T+PV + FLE+I E + L P
Sbjct: 773 KLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAP 825
>AT1G58050.1 | chr1:21478590-21487839 REVERSE LENGTH=1418
Length = 1417
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXX------ 59
TRLLFCTTG D LK VTH+IVDE+HER + DFLLI+
Sbjct: 693 TRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALP 752
Query: 60 XXXXXXMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLT 111
MSAT++A FS YFG P+I G T+PV + FLEDI E T + L
Sbjct: 753 KLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLA 804
>AT5G13010.1 | chr5:4122747-4128660 FORWARD LENGTH=1256
Length = 1255
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%)
Query: 3 GRDTRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXX 62
G +T + + T G D +L V++DE HER +N D L +
Sbjct: 646 GPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFK 705
Query: 63 XXXMSATLNAELFSSYFGGAPMIHIPGFTYPV 94
SATLNA+ FS++FG P+ +IPG T+PV
Sbjct: 706 LIVTSATLNAQKFSNFFGSVPIFNIPGRTFPV 737
>AT2G47250.1 | chr2:19399923-19402981 REVERSE LENGTH=730
Length = 729
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
T L + T G D L+ +I+DE HER + D L +
Sbjct: 162 TMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVV 221
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPV 94
MSATL AE F YF GAP++ +PG +PV
Sbjct: 222 MSATLEAEKFQEYFSGAPLMKVPGRLHPV 250
>AT3G62310.1 | chr3:23057516-23060561 REVERSE LENGTH=727
Length = 726
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
T L + T G D L+ +I+DE HER + D L +
Sbjct: 158 TVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVV 217
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPV 94
MSATL AE F YF GAP++ +PG +PV
Sbjct: 218 MSATLEAEKFQDYFSGAPLMKVPGRLHPV 246
>AT1G27900.1 | chr1:9715615-9720346 REVERSE LENGTH=701
Length = 700
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXX 64
TR+ + T G + L + +I+DE HER +N D LL +V
Sbjct: 95 TRIKYLTDGVLLRESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVL 154
Query: 65 XMSATLNAELFSSYFGGAPMIHIPGFTYPV 94
SATL+ E S +F G P++++PG YPV
Sbjct: 155 ITSATLDGEKVSEFFSGCPVLNVPGKLYPV 184
>AT3G26560.1 | chr3:9750122-9753719 REVERSE LENGTH=1169
Length = 1168
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 3 GRDTRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXX 62
G DT + + T G D NL + +++DE HER ++ D L +
Sbjct: 603 GPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLR 662
Query: 63 XXXMSATLNAELFSSYFGGAPMIHIPGFTYPV 94
SATL+AE FS YF + IPG T+PV
Sbjct: 663 LIVTSATLDAEKFSGYFFNCNIFTIPGRTFPV 694
>AT1G32490.1 | chr1:11742356-11749286 REVERSE LENGTH=1045
Length = 1044
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
T L + T G + +L + VIVDE HER ++ D L +
Sbjct: 495 TVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLI 554
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPV 94
SAT++AE FS YF AP+ PG YPV
Sbjct: 555 SSATMDAEKFSDYFDTAPIFSFPGRRYPV 583
>AT2G35340.1 | chr2:14872728-14879615 FORWARD LENGTH=1045
Length = 1044
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
T L + T G + +L + +IVDE HER + D L +
Sbjct: 495 TILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLI 554
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPV 94
SAT++AE FS +F AP+ PG YPV
Sbjct: 555 SSATMDAEKFSDFFDQAPIFRFPGRRYPV 583
>AT4G16680.1 | chr4:9388613-9390774 REVERSE LENGTH=657
Length = 656
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
T + + T G + L + +I+DE HER ++ D L +
Sbjct: 306 TVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLII 365
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPVRSRF 98
SATL A+ FS YF A + IPG YPV F
Sbjct: 366 SSATLEAKKFSEYFDSARIYLIPGRRYPVEKLF 398
>AT4G01020.1 | chr4:439086-445043 FORWARD LENGTH=1788
Length = 1787
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
+++++ T DR+L G++ VI+DE HER +N D LL +
Sbjct: 395 SKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVI 454
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPV 94
MSAT +A S Y ++H+ G +PV
Sbjct: 455 MSATADANQLSQYLFDCGILHVNGRNFPV 483
>AT5G10370.1 | chr5:3261245-3267188 FORWARD LENGTH=1776
Length = 1775
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 6 TRLLFCTTGXXXXXXXXDRNLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 65
+++++ T DR+L G++ VI+DE HER +N D LL +
Sbjct: 398 SKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVI 457
Query: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPV 94
MSAT +A+ S YF ++ + G +PV
Sbjct: 458 MSATADAKQLSQYFFSCGILLVNGRNFPV 486
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,140,872
Number of extensions: 104068
Number of successful extensions: 250
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 239
Number of HSP's successfully gapped: 18
Length of query: 164
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 73
Effective length of database: 8,611,713
Effective search space: 628655049
Effective search space used: 628655049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 108 (46.2 bits)