BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0139800 Os06g0139800|AK058604
(293 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0139800 Similar to Acid phosphatase (EC 3.1.3.2) 1 all... 471 e-133
Os06g0559500 Similar to Acid phosphatase (EC 3.1.3.2) 1 all... 220 1e-57
Os05g0190500 Similar to Acid phosphatase 198 5e-51
Os05g0189300 Virulence factor, pectin lyase fold family pro... 196 1e-50
Os05g0190300 Acid phosphatase (Class B) family protein 195 4e-50
Os05g0189900 Virulence factor, pectin lyase fold family pro... 194 7e-50
Os05g0192100 Acid phosphatase (Class B) family protein 176 1e-44
Os07g0681200 Plant acid phosphatase family protein 171 6e-43
Os01g0191200 Similar to Acid phosphatase 167 1e-41
Os03g0332500 Acid phosphatase (Class B) family protein 124 8e-29
Os07g0460100 Acid phosphatase (Class B) family protein 113 1e-25
Os05g0191500 Acid phosphatase (Class B) family protein 106 2e-23
Os05g0191700 Acid phosphatase (Class B) family protein 101 6e-22
Os05g0188900 Similar to Acid phosphatase 90 2e-18
Os05g0190100 68 6e-12
>Os06g0139800 Similar to Acid phosphatase (EC 3.1.3.2) 1 allozyme 1
Length = 293
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/254 (90%), Positives = 231/254 (90%)
Query: 40 VFDDAHLLPRPLVIELPXXXXXXXXXXXXXXXXXXXXXXXRCASWRLAGEANNLAPWKSL 99
VFDDAHLLPRPLVIELP RCASWRLAGEANNLAPWKSL
Sbjct: 40 VFDDAHLLPRPLVIELPTTTSSSSPALAEEGEGEAVPAEVRCASWRLAGEANNLAPWKSL 99
Query: 100 PEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDGRDAWVFDVDETLLSNLPYY 159
PEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDGRDAWVFDVDETLLSNLPYY
Sbjct: 100 PEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDGRDAWVFDVDETLLSNLPYY 159
Query: 160 ADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVD 219
ADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVD
Sbjct: 160 ADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVD 219
Query: 220 NLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTS 279
NLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTS
Sbjct: 220 NLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTS 279
Query: 280 ARSFKLPNPMYYIP 293
ARSFKLPNPMYYIP
Sbjct: 280 ARSFKLPNPMYYIP 293
>Os06g0559500 Similar to Acid phosphatase (EC 3.1.3.2) 1 allozyme 1
Length = 264
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 142/214 (66%), Gaps = 2/214 (0%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARV--GD 138
C WRL+ E N PW ++P C +VR Y+ G Y SD V A ++ A+A A G
Sbjct: 50 CDGWRLSVETGNAGPWTAIPPRCLEFVRAYMEGERYASDSAVAAADSLAFAARALASGGG 109
Query: 139 DGRDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRD 198
R AWVFDVDETLL+N PYYA +G+G F+ FD+WV+ +APA+P+SLKLYNE++
Sbjct: 110 GARPAWVFDVDETLLTNAPYYAVNGWGSLEFNETSFDEWVDVAKAPALPASLKLYNELQG 169
Query: 199 LGFKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEE 258
LG LLTGRSE T NL G+H W+KLILR D KTA YKSE+R +E E
Sbjct: 170 LGIHIILLTGRSEFQRNATQVNLLFAGYHSWEKLILRQSPDIGKTAVQYKSERRAALEAE 229
Query: 259 GYRILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
G++ILGNSGDQWSDLLG + RSFKLPNPMY+I
Sbjct: 230 GFKILGNSGDQWSDLLGLPMATRSFKLPNPMYFI 263
>Os05g0190500 Similar to Acid phosphatase
Length = 265
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C S R A EA+N+ WK++P +CA YV +YLTG Y D +VV EA AYA + ++ G
Sbjct: 54 CGSVRTAVEAHNIIGWKTVPADCAEYVSDYLTGERYGRDSDVVINEAIAYAESLKLSGHG 113
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
++ WVFDVDET LS LPY A HGYG + +DH F ++V G APA+ +L+LY + LG
Sbjct: 114 KEIWVFDVDETALSTLPYQAKHGYGTKPYDHASFVQYVAGGSAPALQGTLRLYRRLLQLG 173
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
K LT R+E VT NL QG++ W+KL+L+ P + T +K+ +R+++ GY
Sbjct: 174 IKPVFLTDRTEDQRAVTTHNLLSQGYYSWEKLLLQ-PVGLQTTTQAFKTGERQKLVSAGY 232
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
I+GN GDQWSD+LG R+FK PNP+YY+
Sbjct: 233 VIVGNIGDQWSDILGSPEGYRTFKYPNPIYYV 264
>Os05g0189300 Virulence factor, pectin lyase fold family protein
Length = 251
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 141/212 (66%), Gaps = 1/212 (0%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C S R A EA N+ WK++P CA YV +Y+TG Y D +VV EA AYA + ++ G
Sbjct: 40 CGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGTG 99
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
++ WVFDVD+T LS +PY A+HGYG++ FD++ F K+V +G APA+ S+L+LY + LG
Sbjct: 100 KEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQLG 159
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
K LT R+E VT +NL KQG+ +W+KL+L+ P + + +K+ +R+++ +GY
Sbjct: 160 IKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQ-PVRLQTSTLAFKTCERQKLVNDGY 218
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
I+GN GDQW+D+ R+FK PNPMYY+
Sbjct: 219 IIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
>Os05g0190300 Acid phosphatase (Class B) family protein
Length = 243
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C S R A EA+N+ WK+ +CA Y+ +YLTG Y D +VV EA AYA + ++ G
Sbjct: 32 CGSVRTAIEAHNIIGWKTFTADCAKYLADYLTGDRYPRDADVVINEAIAYAESLKLSGSG 91
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
++ WVFDVDET LS LPY A+HGYG++ +D F ++V G APA+ +L+LY + LG
Sbjct: 92 KEIWVFDVDETALSTLPYQANHGYGVQPYDQASFIQYVSEGSAPALQGTLRLYQRLLQLG 151
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
K LT R+E VT +NL QG+ W+KL+ + P + T +K+++R+++ + GY
Sbjct: 152 VKPVFLTDRTEDQRTVTTNNLLSQGYCSWEKLLFQ-PVGLQTTTQAFKTDERQKLVDAGY 210
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
I+GN GDQW+D+LG R+FK PNPMYY+
Sbjct: 211 VIVGNIGDQWTDILGSPEGCRTFKYPNPMYYV 242
>Os05g0189900 Virulence factor, pectin lyase fold family protein
Length = 250
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C S R A EA+N+ WK+LP +CA YV +Y+TG Y D +VV EA AYA + ++ G
Sbjct: 39 CGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGSG 98
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
++ WVFDVDET LS +PY A HGYG++ +DH F ++V G APA+ +L+LY + LG
Sbjct: 99 KEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQLG 158
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
K LT R+E +T NL QG+ W+KL+L+ P + + +K+ +RK++ + GY
Sbjct: 159 IKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQ-PIGLQTSTQAFKTSERKKLVDAGY 217
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
I+GN GDQWSD+L R+FK P+PMYY+
Sbjct: 218 VIIGNIGDQWSDILRSPEGCRTFKYPSPMYYV 249
>Os05g0192100 Acid phosphatase (Class B) family protein
Length = 204
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 4/186 (2%)
Query: 111 LTGVAYRSDLEVVAREASAYARTARVGDDGRDAWVFDVDETLLSNLPYYADHGYGLELFD 170
+G YR D VV EA AYA + ++ +G++ WVFD+DET LSNLPYYA HG+G L++
Sbjct: 18 CSGGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYN 77
Query: 171 HREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVDNLKKQGFHDWD 230
F ++V G APA+P + +LY + LG K LTGR+E +TV NL++QG+ W
Sbjct: 78 DTSFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWM 137
Query: 231 KLILR----APADRKKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTSARSFKLP 286
+L+L+ A + + +A YKS +R+++E+ G+ ILGN GDQWSD+LG AR+FKLP
Sbjct: 138 ELLLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTFKLP 197
Query: 287 NPMYYI 292
+PMYYI
Sbjct: 198 DPMYYI 203
>Os07g0681200 Plant acid phosphatase family protein
Length = 244
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C SWR+ EANN W ++P C YV Y+ Y D+ VA + +AYA GDDG
Sbjct: 33 CLSWRVMVEANNAKNWPTVPPPCVGYVWRYMAWGQYARDVAGVADQIAAYAAQLAAGDDG 92
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
DAWVFDVD+T LSNL YY +G +D F KW + P +P +L+ +R G
Sbjct: 93 LDAWVFDVDDTCLSNLFYYQAKQFG--AYDPVAFKKWASKAICPGVPGMAQLFQMLRGRG 150
Query: 201 FKTFLLTGRSEGH-HGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEG 259
F+ F+L+GR + T NL GF +D+LI+R+ R +A ++KS R ++ EEG
Sbjct: 151 FRVFILSGRDQQTLASSTAANLAAAGFAGYDRLIMRSAEYRGMSAVVFKSAMRMQLMEEG 210
Query: 260 YRILGNSGDQWSDLLGFSTSARSFKLPNPMYYIP 293
YRI GN GDQWSDL G R FK+PNPMY++P
Sbjct: 211 YRIRGNVGDQWSDLQGDFVGDRVFKVPNPMYFVP 244
>Os01g0191200 Similar to Acid phosphatase
Length = 303
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 133/220 (60%), Gaps = 8/220 (3%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARV-GDD 139
C SWR+ EANN+ W + P +C YV Y+ G YR D +VV EA+AYA A + GD
Sbjct: 59 CDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRDSKVVVDEAAAYAEAAVLSGDP 118
Query: 140 GRDA---WVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEV 196
DA WVFDVDET LS++ +Y HG+G D F +W+ G A A+P+++ LY ++
Sbjct: 119 AADANATWVFDVDETALSHVKFYKKHGFGYHRTDEPAFMEWLIAGRASALPNTVTLYKKL 178
Query: 197 RDLGFKTFLLTGRSEGHH--GVTVDNLKKQGFHDWDKLILRAPADRKKTATI-YKSEKRK 253
LG K L+ R + T NL K+GF WD+LILR+ + + YKS +RK
Sbjct: 179 LLLGVKIVFLSDRPDTPELRNATATNLIKEGFDCWDELILRSENSTATGSVVEYKSGERK 238
Query: 254 EMEEE-GYRILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
++EEE G I+GN GDQWSDLLG R+FKLPNP YYI
Sbjct: 239 KLEEEKGMVIIGNIGDQWSDLLGSPEGRRTFKLPNPAYYI 278
>Os03g0332500 Acid phosphatase (Class B) family protein
Length = 149
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Query: 169 FDHREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHG-VTVDNLKKQGFH 227
+D F W +G P IP+ L+L+ ++ GFK FLL+GR E T +NL+ +GF
Sbjct: 23 YDPSAFKTWASKGACPGIPAVLELFATLQAKGFKVFLLSGRDEETLATCTSENLESEGFL 82
Query: 228 DWDKLILRAPADRKKTATIYKSEKRKEM-EEEGYRILGNSGDQWSDLLGFSTSARSFKLP 286
+++LI+R+P R ++++++KS RK + EEEGYRI GN GDQWSDL G R FK+P
Sbjct: 83 GYERLIMRSPEYRGQSSSVFKSAMRKRLVEEEGYRIRGNVGDQWSDLQGDYVGDRVFKIP 142
Query: 287 NPMYYIP 293
NPMYY+P
Sbjct: 143 NPMYYVP 149
>Os07g0460100 Acid phosphatase (Class B) family protein
Length = 134
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 86/128 (67%), Gaps = 4/128 (3%)
Query: 169 FDHREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVDNLKKQGFHD 228
++ F ++V G APA+P + +LY + +LG K LTGR+E +TV NL++QG+
Sbjct: 6 YNDTSFREYVAEGSAPALPETRRLYRRLLELGVKPVFLTGRTEDQRAITVANLRRQGYTG 65
Query: 229 WDKLILRAPA----DRKKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTSARSFK 284
W+KL+L+ A + +A YKS +R+++++ G+ I+GN GDQWSD+LG AR+FK
Sbjct: 66 WEKLLLKPAAHVAGGLQLSAVAYKSGERQKLQDAGFIIVGNIGDQWSDILGAPEGARTFK 125
Query: 285 LPNPMYYI 292
LP+PMYYI
Sbjct: 126 LPDPMYYI 133
>Os05g0191500 Acid phosphatase (Class B) family protein
Length = 171
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 64/92 (69%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C SWRL EA+N+ W+++P EC Y+ Y+ G YR D VV EA AYA T ++ +G
Sbjct: 69 CDSWRLGVEAHNVIDWRTVPAECEGYIGHYMLGEHYRRDFAVVVDEAVAYAETLKLAGNG 128
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHR 172
++ WVFD+DET LSNLPYYA HG+G+++ D R
Sbjct: 129 KEIWVFDIDETSLSNLPYYAKHGFGVDVDDGR 160
>Os05g0191700 Acid phosphatase (Class B) family protein
Length = 147
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query: 168 LFDHREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVDNLKKQGFH 227
L+D F ++V G A+P + +LY + LG K LT R+E +TV NL++QG+
Sbjct: 18 LYDDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYS 77
Query: 228 DWDKLILR----APADRKKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTSARSF 283
W KL+L+ + + +KS +R+++E+ G+ I+GN GDQWSD+LG AR+F
Sbjct: 78 GWMKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTF 137
Query: 284 KLPNPMYYI 292
KLP+P+YYI
Sbjct: 138 KLPDPLYYI 146
>Os05g0188900 Similar to Acid phosphatase
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Query: 181 GEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADR 240
G APA+ +L+LY + +LG K LT R+E VT+ NL +QG+ W+KL+L+
Sbjct: 138 GTAPALAGTLRLYRRLLELGIKPVFLTVRTENQRAVTIRNLSQQGYSGWEKLVLQPTGGL 197
Query: 241 KKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
A +KS +R ++ +GY I+GN GDQWSDLLG + AR+FKL NP++ +
Sbjct: 198 SIEA--FKSGERHKLVSDGYAIVGNIGDQWSDLLGPAAGARTFKLSNPIWSL 247
>Os05g0190100
Length = 385
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 110 YLTGVAYRSDLEVVAREASAYARTARVGDDGRDAWVFDVDETLLSNLPYYADHGYGLELF 169
Y+T Y D +VV E AYA + ++ +G+++ E LP +
Sbjct: 227 YMTSDRYGRDSDVVINEGIAYAESLKLSGNGKESIAIRPRE-----LP---------PVN 272
Query: 170 DHREFDKWVERGEAPAIPSSLKLYNEVRDLGFKTFLLTGRSEGHHGVTVDNLKKQGFHDW 229
RE + G A + + LG K LT R+E +T NL QG
Sbjct: 273 GRRECTR--ATGNATTL--------SMAALGIKPVFLTDRAENQRAITTHNLHLQGLLQL 322
Query: 230 DKLILRAPAD-RKKTATIYKSEKRKEMEEEGYRILGNSGDQWSDLLGFSTSARSFKLPNP 288
+ I+ P ++K+ ++K++ GY I+GN GDQWS++LG R FK PNP
Sbjct: 323 GEAIV--PVGWTPDLNCLFKTSEQKKLVIAGYAIVGNIGDQWSNILGGPEGCRIFKYPNP 380
Query: 289 MYYI 292
MYY+
Sbjct: 381 MYYV 384
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,970,429
Number of extensions: 359079
Number of successful extensions: 776
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 758
Number of HSP's successfully gapped: 15
Length of query: 293
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 193
Effective length of database: 11,814,401
Effective search space: 2280179393
Effective search space used: 2280179393
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)