Os01g0191200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acid phosphatase.
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Os01g0191200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acid phosphatase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 275.77 | 0.78 | 13.8 | -0.745 | 3.14 | -3.82 | -1.39 | -7.32 | 0.138 | 19.3 | 0.6742 | 1389 | -- | -- |
| 300.13 | 0.807 | 13.9 | -1.39 | 2.82 | -2.57 | -1.17 | -- | 0.0407 | 19.1 | 1.254 | 1305 | -- | -- |
| 277.23 | 0.775 | 13.8 | -0.558 | 3.27 | -4.41 | -- | -9.54 | 0.178 | 19.4 | 0.3365 | 1413 | -- | -- |
| 301.64 | 0.809 | 13.9 | -1.38 | 2.9 | -2.49 | -- | -- | 0.0338 | 19.2 | 1.25 | 1313 | -- | -- |
| 428.38 | 0.964 | 13.9 | -0.712 | -- | -6.21 | -- | -7.55 | -0.186 | -- | 0.8584 | 3804 | -- | -- |
| 355.8 | 0.884 | 13.9 | -0.908 | 3.41 | -- | -0.517 | -- | 0.295 | 19.8 | -- | -- | -- | -- |
| 356.57 | 0.884 | 13.9 | -0.895 | 3.41 | -- | -- | -- | 0.294 | 19.8 | -- | -- | -- | -- |
| 402.26 | 0.934 | 14 | -1.66 | -- | -5.52 | -- | -- | -0.496 | -- | 2.597 | 3792 | -- | -- |
| 344.96 | 0.865 | 13.9 | -- | 3.1 | -1.74 | -- | -- | 0.213 | 19.3 | 2.41 | 1327 | -- | -- |
| 985.17 | 1.47 | 13.8 | -0.936 | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
| 377.66 | 0.909 | 13.9 | -- | 3.42 | -- | -- | -- | 0.394 | 19.8 | -- | -- | -- | -- |
| 377.23 | 0.905 | 13.9 | -- | -- | -4.78 | -- | -- | -0.0413 | -- | 3.009 | 952 | -- | -- |
| 1008.27 | 1.48 | 13.8 | -- | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 274.78 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 8 | 275.01 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 62 | 276.60 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 66 | 276.75 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 82 | 277.78 | humidity | 80 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 91 | 277.97 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 99 | 278.13 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 105 | 278.18 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 107 | 278.20 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 108 | 278.20 | humidity | 80 | 43200 | > th | dose dependent | sin | 17 | NA |
| 185 | 280.30 | humidity | 70 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 254 | 281.35 | humidity | 80 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 266 | 281.49 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 299 | 281.85 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 300 | 281.85 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 311 | 281.98 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 321 | 281.99 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 339 | 282.12 | humidity | 90 | 43200 | < th | dose independent | sin | 16 | NA |
| 343 | 282.14 | humidity | 90 | 43200 | > th | dose independent | sin | 16 | NA |
| 373 | 282.25 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 374 | 282.26 | humidity | 80 | 43200 | > th | dose dependent | no | NA | NA |
| 397 | 282.35 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 421 | 282.45 | humidity | 80 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 485 | 282.84 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 524 | 283.02 | humidity | 80 | 43200 | > th | dose independent | sin | 0 | NA |
| 528 | 283.04 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 560 | 283.19 | humidity | 80 | 43200 | > th | dose independent | sin | 21 | NA |
| 568 | 283.21 | humidity | 80 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 585 | 283.31 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 10 |
| 634 | 283.46 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 715 | 283.66 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 741 | 283.71 | humidity | 80 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 814 | 283.86 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 832 | 283.89 | humidity | 80 | 43200 | < th | dose independent | sin | 23 | NA |
| 843 | 283.91 | radiation | 1 | 1440 | > th | dose independent | sin | 19 | NA |
| 956 | 284.18 | temperature | 20 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 987 | 284.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 17 |