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Os05g0191500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Acid phosphatase (Class B) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.01 (0.0916) R2 : 0.755
β1 : -9.74 (0.419) R2dD : 0.843 R2D : -0.205
β2 : 3.34 (0.168) R2dC : 0.218 R2C : 0.21
β3 : 6.33 (0.316) R2dE : 0.31 R2E : 0.000633
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -15.1 (1.43) R2dD*E : 0.185 R2D*E : -0.13
γ1 : 0.0637 (0.177) R2dN8 : 0.000216 R2N8 : -0.0309
σ : 1.28
deviance : 758.49
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C
peak time of C : 21.7
E
wheather : temperature
threshold : 20.13
memory length : 4310
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.1
open length of G : 0.583

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
757.86 1.29 9.01 -9.74 3.36 6.34 -0.485 -14.9 0.0906 21.7 20.07 4312 11.1 0.574
947.85 1.43 8.4 -7.57 3.87 7.08 -0.663 -- 0.833 21.5 17.74 4319 11 0.15
758.49 1.28 9.01 -9.74 3.34 6.33 -- -15.1 0.0637 21.7 20.13 4310 11.1 0.583
886.48 1.39 8.42 -6.91 3.28 7.32 -- -- 0.732 21.7 16.85 4350 11.5 0.0148
1086.32 1.54 8.87 -9.74 -- 8.22 -- -17.8 0.0638 -- 8.272 5146 13.7 2.02
1662.91 1.91 8.19 -3.32 3.51 -- -0.353 -- 1.9 21.8 -- -- -- --
1663.38 1.91 8.19 -3.31 3.51 -- -- -- 1.9 21.8 -- -- -- --
1052.93 1.51 8.81 -6.19 -- 9.11 -- -- 0.546 -- 10.6 4927 15.4 3.44
1954.7 2.06 8.41 -- 3.64 6.74 -- -- 2.23 21.6 16.53 4353 11.5 0.0312
2398.83 2.29 8.09 -3.27 -- -- -- -- 1.9 -- -- -- -- --
1951.76 2.07 8.11 -- 3.5 -- -- -- 2.27 21.7 -- -- -- --
1720.17 1.93 8.09 -- -- 6.4 -- -- 2.18 -- -4.11 4870 16.2 2.16
2681.27 2.42 8.01 -- -- -- -- -- 2.26 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 709.44 radiation 1 43200 > th dose independent rect. 18 11
2 712.29 humidity 90 43200 < th dose independent rect. 9 1
4 715.78 humidity 90 43200 > th dose independent rect. 9 1
5 715.84 radiation 1 14400 < th dose dependent rect. 5 3
8 716.85 radiation 1 14400 < th dose dependent rect. 2 6
14 717.94 radiation 1 14400 < th dose dependent rect. 21 11
17 718.14 radiation 1 43200 < th dose independent rect. 18 11
20 718.61 humidity 90 43200 > th dose independent rect. 5 7
21 718.93 radiation 1 14400 > th dose independent rect. 18 15
22 718.93 radiation 1 14400 > th dose independent rect. 18 20
23 719.02 radiation 1 14400 < th dose independent rect. 18 14
38 721.42 radiation 1 14400 < th dose independent rect. 18 20
67 723.85 radiation 1 14400 < th dose dependent sin 8 NA
139 727.96 humidity 90 43200 > th dose dependent rect. 5 8
150 728.95 humidity 80 43200 > th dose dependent rect. 9 2
162 730.13 radiation 1 14400 < th dose dependent rect. 16 20
183 731.27 radiation 1 43200 > th dose independent rect. 18 1
204 731.78 radiation 1 14400 < th dose independent sin 10 NA
211 732.15 radiation 1 14400 > th dose independent sin 10 NA
228 732.96 radiation 1 14400 < th dose dependent rect. 18 22
235 733.43 radiation 1 14400 > th dose independent rect. 5 9
239 733.60 radiation 1 14400 < th dose independent rect. 5 9
263 735.23 radiation 1 14400 < th dose dependent rect. 5 14
266 735.32 radiation 1 14400 < th dose dependent rect. 5 18
276 735.56 radiation 1 14400 < th dose dependent rect. 2 17
277 735.57 radiation 1 14400 < th dose independent rect. 1 14
296 735.64 radiation 1 14400 < th dose independent rect. 23 16
297 735.65 radiation 1 14400 < th dose dependent rect. 2 21
298 735.66 radiation 1 14400 < th dose independent rect. 21 18
342 735.81 radiation 1 14400 < th dose dependent rect. 5 22
358 736.05 radiation 1 14400 < th dose dependent rect. 21 22
372 736.17 radiation 1 14400 < th dose dependent no NA NA
373 736.18 radiation 1 43200 < th dose independent rect. 18 1
382 736.29 radiation 1 43200 < th dose independent rect. 18 9
388 736.48 radiation 1 43200 < th dose independent rect. 18 4
410 737.14 radiation 1 14400 < th dose dependent rect. 9 23
422 737.61 radiation 1 14400 < th dose independent sin 4 NA
433 738.00 radiation 1 14400 > th dose independent sin 4 NA
435 738.20 radiation 1 14400 < th dose independent rect. 5 4
442 738.47 radiation 1 14400 > th dose independent rect. 5 4
503 740.04 radiation 1 14400 > th dose independent rect. 6 13
534 740.41 humidity 90 43200 < th dose independent rect. 5 15
539 740.58 radiation 1 14400 < th dose independent rect. 6 13
544 740.67 radiation 1 14400 < th dose independent rect. 6 16
545 740.68 radiation 1 14400 < th dose independent rect. 6 18
548 740.69 radiation 1 14400 < th dose independent rect. 6 21
578 741.22 radiation 1 14400 > th dose independent no NA NA
635 741.62 radiation 1 14400 < th dose independent rect. 1 18
642 741.66 radiation 1 14400 < th dose independent rect. 23 20
645 741.67 radiation 1 14400 < th dose independent rect. 21 22
659 741.70 radiation 1 14400 < th dose independent rect. 1 23
672 741.75 radiation 1 14400 < th dose independent no NA NA
729 742.82 radiation 1 14400 < th dose independent rect. 1 8
731 742.85 radiation 1 14400 < th dose independent rect. 23 10
736 742.89 radiation 1 14400 < th dose independent rect. 21 12
743 743.01 radiation 1 14400 > th dose independent rect. 10 23
772 743.77 atmosphere 1005 43200 > th dose dependent rect. 19 1
774 743.89 radiation 1 14400 < th dose independent rect. 10 23
832 745.43 temperature 20 43200 < th dose dependent rect. 3 1
933 748.14 humidity 90 43200 > th dose independent rect. 5 16
965 748.84 humidity 80 43200 > th dose dependent rect. 18 1
986 749.24 atmosphere 1005 43200 > th dose dependent rect. 13 7