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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0332500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Acid phosphatase (Class B) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0143) R2 : 0.00388
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0401 (0.0301) R2dN8 : 0.00501 R2N8 : 0.00388
σ : 0.269
deviance : 33.33
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.57 0.264 2.95 0.0914 0.0558 0.371 0.242 0.127 -0.0188 11 0.6391 25 -- --
31.57 0.262 2.95 0.0891 0.055 0.382 0.238 -- -0.0188 10.9 0.6998 24 -- --
31.78 0.263 2.95 0.0995 0.0576 0.358 -- -0.0556 -0.0194 9.48 0.6999 24 -- --
31.78 0.263 2.95 0.0995 0.0587 0.354 -- -- -0.019 9.45 0.7 24 -- --
31.98 0.263 2.95 0.0967 -- 0.372 -- -0.155 -0.0185 -- 0.7343 24 -- --
32.6 0.268 2.95 0.111 0.0695 -- 0.176 -- -0.0278 8.75 -- -- -- --
32.67 0.268 2.95 0.116 0.0747 -- -- -- -0.0283 7.59 -- -- -- --
31.98 0.263 2.95 0.0989 -- 0.356 -- -- -0.0186 -- 0.7189 24 -- --
32.04 0.264 2.95 -- 0.0623 0.349 -- -- -0.0269 9.6 0.7884 24 -- --
32.97 0.268 2.95 0.117 -- -- -- -- -0.0272 -- -- -- -- --
33.03 0.269 2.95 -- 0.0756 -- -- -- -0.0412 7.48 -- -- -- --
32.24 0.264 2.95 -- -- 0.365 -- -- -0.0286 -- 0.7942 24 -- --
33.33 0.269 2.95 -- -- -- -- -- -0.0401 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.29 humidity 90.0 30 < th dose independent rect. 22 1
2 30.30 wind 9.0 1440 < th dose independent rect. 23 1
3 30.30 temperature 10.0 1440 > th dose independent rect. 23 1
6 30.30 temperature 30.0 1440 < th dose independent rect. 23 1
10 30.30 humidity 50.0 1440 > th dose independent rect. 23 1
20 30.30 atmosphere 995.0 1440 > th dose independent rect. 23 1
21 30.30 radiation 1.0 1440 < th dose independent rect. 23 1
41 30.30 temperature 10.0 1440 > th dose independent rect. 24 23
44 30.30 radiation 1.0 1440 < th dose dependent rect. 23 1
49 30.31 temperature 15.0 30 > th dose dependent rect. 22 1
52 30.31 humidity 90.0 30 < th dose dependent rect. 22 1
53 30.31 atmosphere 1005.0 30 > th dose dependent rect. 22 1
54 30.32 wind 1.0 30 > th dose independent rect. 22 1
55 30.32 temperature 25.0 30 > th dose independent rect. 22 1
56 30.32 atmosphere 1005.0 30 > th dose independent rect. 22 1
58 30.32 atmosphere 995.0 30 > th dose dependent rect. 22 1
61 30.33 wind 7.0 30 < th dose independent rect. 22 1
63 30.33 temperature 10.0 30 > th dose independent rect. 22 1
66 30.33 temperature 30.0 30 < th dose independent rect. 22 1
67 30.33 humidity 50.0 30 > th dose independent rect. 22 1
70 30.33 atmosphere 995.0 30 > th dose independent rect. 22 1
72 30.33 atmosphere 1010.0 30 < th dose independent rect. 22 1
74 30.33 radiation 1.0 30 < th dose independent rect. 22 1
79 30.33 precipitation 0.1 30 < th dose independent rect. 22 1
80 30.33 temperature 10.0 30 > th dose independent rect. 23 23
81 30.33 wind 1.0 90 < th dose dependent rect. 9 1
82 30.33 radiation 1.0 30 < th dose dependent rect. 22 1
88 30.33 precipitation 0.1 30 < th dose dependent rect. 22 1
90 30.34 wind 9.0 30 < th dose dependent rect. 22 1
93 30.36 wind 1.0 30 > th dose dependent rect. 22 1
95 30.36 humidity 50.0 30 > th dose dependent rect. 22 1
101 30.41 atmosphere 1015.0 30 < th dose dependent rect. 22 1
105 30.46 temperature 30.0 30 < th dose dependent rect. 22 1
116 30.56 wind 1.0 90 < th dose independent rect. 8 2
120 30.60 wind 9.0 30 < th dose independent rect. 23 23
125 30.65 atmosphere 1010.0 90 > th dose independent rect. 8 1
126 30.65 atmosphere 1010.0 10 > th dose independent rect. 9 1
240 31.07 wind 1.0 30 < th dose dependent rect. 4 1
248 31.17 wind 1.0 30 < th dose independent rect. 4 1
252 31.23 radiation 30.0 90 > th dose independent rect. 8 1
253 31.24 radiation 30.0 90 > th dose independent sin 11 NA
356 31.41 atmosphere 995.0 30 > th dose independent rect. 23 23
362 31.46 radiation 20.0 90 > th dose dependent rect. 8 1
385 31.48 atmosphere 1010.0 30 < th dose independent rect. 5 23
388 31.49 atmosphere 1010.0 30 < th dose independent rect. 23 23
400 31.53 radiation 40.0 30 < th dose independent sin 11 NA
514 31.55 wind 1.0 720 < th dose dependent rect. 4 1
542 31.58 wind 1.0 30 < th dose dependent rect. 14 15
583 31.60 radiation 20.0 90 > th dose dependent sin 11 NA
612 31.62 wind 1.0 30 < th dose dependent rect. 9 20
614 31.63 atmosphere 1010.0 90 > th dose independent sin 5 NA
620 31.64 atmosphere 1010.0 30 < th dose independent sin 5 NA
626 31.64 radiation 30.0 10 > th dose dependent rect. 10 1
630 31.65 atmosphere 1010.0 10 > th dose independent sin 4 NA
643 31.66 temperature 25.0 30 < th dose dependent rect. 4 1
644 31.66 wind 1.0 30 < th dose dependent rect. 4 6
654 31.68 wind 1.0 270 < th dose independent rect. 6 1
656 31.68 radiation 40.0 30 < th dose independent rect. 5 23
665 31.69 wind 1.0 270 < th dose dependent rect. 6 1
680 31.70 atmosphere 1010.0 90 < th dose independent rect. 23 12
682 31.70 humidity 90.0 30 > th dose dependent rect. 4 1
684 31.70 wind 1.0 30 < th dose dependent rect. 1 9
691 31.71 temperature 25.0 30 < th dose independent rect. 4 1
711 31.71 radiation 30.0 90 < th dose independent rect. 23 12
748 31.72 wind 1.0 270 < th dose independent rect. 6 4
782 31.74 humidity 90.0 30 > th dose independent rect. 4 1
854 31.75 atmosphere 1010.0 10 < th dose independent rect. 5 11
858 31.75 radiation 40.0 10 > th dose independent rect. 12 23
869 31.76 temperature 25.0 30 > th dose independent rect. 9 1
883 31.76 atmosphere 1005.0 10 > th dose dependent rect. 9 1
887 31.76 wind 1.0 30 < th dose dependent rect. 6 23
905 31.77 atmosphere 1010.0 10 < th dose independent rect. 5 15
908 31.77 radiation 40.0 30 < th dose independent rect. 23 23
932 31.77 wind 1.0 30 < th dose dependent rect. 4 22