Os05g0192100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acid phosphatase (Class B) family protein.
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Os05g0192100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acid phosphatase (Class B) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.7 | 0.335 | 2.93 | -0.406 | 0.0413 | -9.35 | 0.245 | -55.5 | 0.0732 | 12.3 | 8.711 | 97 | 6.01 | -- |
| 73.06 | 0.401 | 3.03 | -0.153 | 0.0332 | 2.65 | -0.491 | -- | 0.0388 | 19 | 8.711 | 97 | 6.01 | -- |
| 50.92 | 0.332 | 2.93 | -0.395 | 0.0474 | -9.24 | -- | -55.1 | 0.0743 | 10.2 | 8.73 | 96 | 5.99 | -- |
| 57.84 | 0.354 | 3.01 | -0.0664 | 0.0319 | 3.38 | -- | -- | 0.0765 | 6.67 | 8.6 | 145 | 5.96 | -- |
| 51.06 | 0.333 | 2.93 | -0.393 | -- | -9.2 | -- | -54.9 | 0.0737 | -- | 8.727 | 96 | 6 | -- |
| 81.87 | 0.424 | 3.03 | -0.202 | 0.0657 | -- | -0.668 | -- | 0.0228 | 19 | -- | -- | -- | -- |
| 82.92 | 0.426 | 3.03 | -0.187 | 0.0793 | -- | -- | -- | 0.0221 | 16.8 | -- | -- | -- | -- |
| 57.87 | 0.354 | 3.02 | -0.0435 | -- | 3.35 | -- | -- | 0.0777 | -- | 8.573 | 145 | 5.89 | -- |
| 57.65 | 0.354 | 3.02 | -- | 0.0656 | 3.4 | -- | -- | 0.0838 | 10.9 | 8.501 | 145 | 5.88 | -- |
| 83.26 | 0.426 | 3.03 | -0.19 | -- | -- | -- | -- | 0.02 | -- | -- | -- | -- | -- |
| 83.85 | 0.428 | 3.03 | -- | 0.0827 | -- | -- | -- | 0.0429 | 16.8 | -- | -- | -- | -- |
| 57.92 | 0.354 | 3.02 | -- | -- | 3.37 | -- | -- | 0.0829 | -- | 8.594 | 145 | 5.88 | -- |
| 84.21 | 0.428 | 3.03 | -- | -- | -- | -- | -- | 0.0411 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.08 | wind | 9 | 90 | > th | dose independent | sin | 12 | NA |
| 2 | 53.36 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 10 | 53.38 | wind | 9 | 90 | < th | dose independent | sin | 12 | NA |
| 12 | 53.39 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 29 | 53.71 | wind | 9 | 90 | > th | dose independent | rect. | 17 | 9 |
| 38 | 53.73 | wind | 9 | 90 | > th | dose independent | rect. | 17 | 6 |
| 53 | 54.11 | wind | 9 | 90 | > th | dose dependent | sin | 12 | NA |
| 55 | 54.20 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 157 | 57.36 | wind | 9 | 10 | > th | dose independent | rect. | 18 | 1 |
| 160 | 57.36 | wind | 9 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 283 | 62.46 | wind | 9 | 10 | > th | dose independent | rect. | 17 | 5 |
| 326 | 63.10 | wind | 9 | 10 | > th | dose independent | rect. | 17 | 3 |
| 374 | 64.67 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 432 | 65.12 | wind | 9 | 10 | > th | dose independent | sin | 12 | NA |
| 440 | 65.23 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 1 |
| 796 | 67.43 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 829 | 67.60 | wind | 7 | 10 | > th | dose dependent | rect. | 16 | 11 |
| 832 | 67.62 | wind | 7 | 10 | > th | dose dependent | rect. | 16 | 6 |