BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0192100 Os05g0192100|AK061404
(204 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256 187 4e-48
AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258 176 8e-45
AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261 175 2e-44
AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257 166 6e-42
AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271 147 5e-36
AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266 146 6e-36
AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252 142 1e-34
AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272 136 8e-33
AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273 121 3e-28
AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284 60 6e-10
>AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256
Length = 255
Score = 187 bits (474), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 15 ATTCSGGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGAT 74
A +G + D +V++D A+A+A+S+++SG+GK++W+FDIDET L+N+ YY HG+G+
Sbjct: 70 AEYLNGDQFLSDYSVIVDYALAFAKSVEISGDGKDVWIFDIDETLLTNIDYYKAHGYGSE 129
Query: 75 LYNDTSFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYS 134
Y+D F E+V +G+APA + RLY L +LG + LTGR E QR T TNLR GYS
Sbjct: 130 PYDDNKFSEWVEQGTAPAFDASLRLYNALKKLGFTIILLTGRDEHQRTSTETNLRDAGYS 189
Query: 135 GWMELLLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTF 194
GW LLL+ + SA YKS +R KL + GF I GN GDQWSD+ G R+F
Sbjct: 190 GWERLLLR----GPNDQGKSATNYKSEQRSKLIEEGFKIRGNSGDQWSDLQGFAVADRSF 245
Query: 195 KLPDPMYYI 203
K+P+PMYYI
Sbjct: 246 KVPNPMYYI 254
>AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258
Length = 257
Score = 176 bits (446), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 118/184 (64%), Gaps = 4/184 (2%)
Query: 20 GGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYNDT 79
G Y D V +EA+ +A S++ SG+GK+IW+FDIDET LSNLPYY HGFG L++ +
Sbjct: 77 GKGYLTDLERVSEEALIFARSIEFSGDGKDIWIFDIDETLLSNLPYYIDHGFGLELFDHS 136
Query: 80 SFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWMEL 139
F ++V G APA+ + +LY+R+L LG K LTGR E R +TV NL G+ W +L
Sbjct: 137 EFDKWVERGVAPAIAPSLKLYQRVLDLGYKVFLLTGRKESHRLVTVENLINAGFQNWDKL 196
Query: 140 LLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTFKLPDP 199
+L+ + E A YKS +R ++ G+ I GN GDQWSD+LGT R+FKL +P
Sbjct: 197 ILR----SPEEQHKMATLYKSEKRDEMVKEGYRIRGNSGDQWSDLLGTSMSQRSFKLANP 252
Query: 200 MYYI 203
MYYI
Sbjct: 253 MYYI 256
>AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261
Length = 260
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 122/184 (66%), Gaps = 4/184 (2%)
Query: 20 GGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYNDT 79
G Y D V +EA YA S + +G+GK+IW+FDIDET LSNLPYY +HG G +++ +
Sbjct: 80 GEGYVVDVERVSEEAKVYASSFESNGDGKDIWIFDIDETLLSNLPYYMEHGCGLEVFDHS 139
Query: 80 SFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWMEL 139
F +V +G APA+ + +LY++++ LG K + LTGR E+ R ITV NLR G+ W +L
Sbjct: 140 KFDMWVEKGIAPAIAPSLKLYQKVIHLGYKVILLTGRRENHRVITVENLRNAGFHNWDKL 199
Query: 140 LLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTFKLPDP 199
+L+ + + +A YKS +R+++ G+ I GN GDQWSD+LG+ R+FKLP+P
Sbjct: 200 ILR----SLDDRNKTATMYKSEKREEMVKEGYRIRGNSGDQWSDLLGSAMSERSFKLPNP 255
Query: 200 MYYI 203
MYYI
Sbjct: 256 MYYI 259
>AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257
Length = 256
Score = 166 bits (421), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 4/187 (2%)
Query: 18 CSGGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYN 77
+GG + +D VV AI YA+++++ G+GK+ WVFDIDET LSN+ YY +G+G+ Y+
Sbjct: 74 INGGQFDKDYDVVASYAIDYAKTVKVGGDGKDAWVFDIDETLLSNIEYYKANGYGSEPYD 133
Query: 78 DTSFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWM 137
+ E V +G P + RLY+ L +LG + LTGR E R++T NLR GY GW
Sbjct: 134 SIKYNEVVEKGKDPGYDASLRLYKALKKLGFTIILLTGRDEGHRSVTEKNLRDAGYFGWN 193
Query: 138 ELLLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTFKLP 197
LLL+ + +A YKS +R ++ G+TI GN GDQWSD+LG +R+FK+P
Sbjct: 194 RLLLR----GQNDQGKTATQYKSEQRSQVVKEGYTIHGNTGDQWSDLLGFAVASRSFKVP 249
Query: 198 DPMYYIG 204
+PMYY+
Sbjct: 250 NPMYYVA 256
>AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271
Length = 270
Score = 147 bits (370), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 18 CSGGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYN 77
+ Y+ DS V EA YA+ L L + +W+FD+D+T LS++PYYAK+G+G
Sbjct: 88 ITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTA 147
Query: 78 DTSFREYVAEG-SAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGW 136
++ ++ G S P LPET LY LL+LG++P+ ++ R + +TV NL+ G + W
Sbjct: 148 PGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKW 207
Query: 137 MELLLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTFKL 196
L+LKP + + V YKS R L G+ I+GNIGDQW+D++ G R FKL
Sbjct: 208 KHLILKP-----NGSKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKL 261
Query: 197 PDPMYYI 203
P+P+YY+
Sbjct: 262 PNPLYYV 268
>AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266
Length = 265
Score = 146 bits (369), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%), Gaps = 13/189 (6%)
Query: 19 SGGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYND 78
+ Y+ DS V EA YA+ L L + +W+FD+D+T LS++PYYAK+G+G +
Sbjct: 84 TSKQYQYDSKTVCKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDP 143
Query: 79 TSFREYVAEG-SAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWM 137
++ ++ G S P LPE LY+ +++LG++P+ L+ R + +N+T+ NL G + W
Sbjct: 144 GAYWLWLGTGASTPGLPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWK 203
Query: 138 ELLLKPAVHAAGELQGS---AVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTF 194
L+LKP GS V YKS R+ L G+ I+GNIGDQW+D++ G R F
Sbjct: 204 HLILKP--------NGSNLRQVVYKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG-RVF 254
Query: 195 KLPDPMYYI 203
KLP+P+YY+
Sbjct: 255 KLPNPLYYV 263
>AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252
Length = 251
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 5/185 (2%)
Query: 20 GGHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYNDT 79
G Y RD + +D+ Y + L G+G + W+ D+D+T SN+ YY +G Y+ T
Sbjct: 70 AGQYDRDVQLTVDQIKVYLNEIILPGDGMDAWILDVDDTCFSNVFYYRLKRYGCDPYDPT 129
Query: 80 SFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQ-RNITVTNLRRQGYSGWME 138
FR + +G +PA+ L+ +L++ G K +TGR E+ R T+ NL QG++G+
Sbjct: 130 GFRTWAMKGESPAIQPVLELFYKLIETGFKVFLVTGRDEETLRQATLENLHNQGFTGYER 189
Query: 139 LLLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTFKLPD 198
L+++ A + + SA YK+ R+++ + G+ I GN+GDQWSD+ G G RTFK+P+
Sbjct: 190 LIMRTADNK----RQSATTYKTRIRKEMMEEGYRIWGNVGDQWSDLQGEYSGDRTFKIPN 245
Query: 199 PMYYI 203
PMY++
Sbjct: 246 PMYFV 250
>AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272
Length = 271
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 8/190 (4%)
Query: 19 SGGHYRRDSAVVIDEAIAYAESLQLSG---NGKEIWVFDIDETSLSNLPYYAKHGF-GAT 74
+ Y+ D A +DE I + S+ S +G + W+FDID+T LS +PY+ K+GF G
Sbjct: 86 TSSQYKDDVARTVDEVILHFGSMCCSKSKCDGMDAWIFDIDDTLLSTIPYHKKNGFFGGE 145
Query: 75 LYNDTSFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYS 134
N T F +++ + APA+P ++LY + + G+K ++ R E R+ TV NL + GY
Sbjct: 146 KLNSTKFEDWIQKKKAPAVPHMKKLYHDIRERGIKIFLISSRKEYLRSATVDNLIQAGYY 205
Query: 135 GWMELLLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTF 194
GW L+L+ + Q YKS +R+ L G+ + G +GDQWS G P RTF
Sbjct: 206 GWSNLMLR----GLEDQQKEVKQYKSEKRKWLMSLGYRVWGVMGDQWSSFAGCPLPRRTF 261
Query: 195 KLPDPMYYIG 204
KLP+ +YY+
Sbjct: 262 KLPNSIYYVA 271
>AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273
Length = 272
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 19 SGGHYRRDSAVVIDEAIAY---AESLQLSGNGKEIWVFDIDETSLSNLPYYAKHG-FGAT 74
+ Y D +DEAI Y + + +G + W+FDID+T LS +PY+ +G FG
Sbjct: 87 TSSQYEDDVERAVDEAILYLGKTCCEKKTCDGMDAWIFDIDDTLLSTIPYHKSNGCFGGE 146
Query: 75 LYNDTSFREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYS 134
N T F E+ G APA+P +LY + + G K ++ R E R+ TV NL GY
Sbjct: 147 QLNTTKFEEWQNSGKAPAVPHMVKLYHEIRERGFKIFLISSRKEYLRSATVENLIEAGYH 206
Query: 135 GWMELLLKPAVHAAGELQGSAVAYKSGERQKLEDAGFTILGNIGDQWSDILGTPEGARTF 194
W LLL+ + + S YK+ R L G+ + G +G QW+ G P RTF
Sbjct: 207 SWSNLLLR----GEDDEKKSVSQYKADLRTWLTSLGYRVWGVMGAQWNSFSGCPVPKRTF 262
Query: 195 KLPDPMYYIG 204
KLP+ +YY+
Sbjct: 263 KLPNSIYYVA 272
>AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284
Length = 283
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 33/184 (17%)
Query: 21 GHYRRDSAVVIDEAIAYAESLQLSGNGKEIWVFDIDETSLSNLPYYAKHGFGATLYNDTS 80
G Y R+ I A+ Y ++++ + ++ V DID+T+L L D+
Sbjct: 121 GIYLRELNFTIQMALTYFQTIKPMNDNCDVVVIDIDDTNL--------------LEQDSY 166
Query: 81 FREYVAEGSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWMELL 140
+ +Y+ E LY +L G V L+ R E +RN T+ L+ +GYS W L+
Sbjct: 167 YMKYIEEAKHQKSILILALYSKLRSQGYSMVLLSRRPETERNATIEQLKSRGYSDWSHLI 226
Query: 141 LKPAVHAAGELQGSAVAYKSGERQKLE-DAGFTILGNIGDQWSDILG--TPEGARTFKLP 197
+ + RQK E + G ++G IG+ + G + R FKLP
Sbjct: 227 MS----------------REDTRQKEELERGHRVIGVIGNHMDVLRGQWNWQSKRLFKLP 270
Query: 198 DPMY 201
Y
Sbjct: 271 SLTY 274
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,718,216
Number of extensions: 193780
Number of successful extensions: 442
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 426
Number of HSP's successfully gapped: 10
Length of query: 204
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 110
Effective length of database: 8,529,465
Effective search space: 938241150
Effective search space used: 938241150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)