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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0191700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Acid phosphatase (Class B) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.92 (0.0383) R2 : 0.176
β1 : 0.819 (0.148) R2dD : 0.0663 R2D : -0.0203
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.63 (0.17) R2dE : 0.208 R2E : 0.0993
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.247 (0.0863) R2dN8 : 0.023 R2N8 : -0.0304
σ : 0.704
deviance : 228.3
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 7.028
memory length : 1435
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
217.73 0.693 3.91 0.954 0.564 -2 -1.38 1.18 0.305 20.5 9.466 681 -- --
218.62 0.689 3.94 0.759 0.558 -1.98 -1.15 -- 0.255 20.4 14.5 669 -- --
222.66 0.695 3.94 0.788 0.586 -2.04 -- -0.0299 0.253 20.5 11.36 653 -- --
222.64 0.695 3.94 0.8 0.581 -2.03 -- -- 0.256 20.6 11.01 674 -- --
226.9 0.702 3.88 1.1 -- -1.64 -- 1.29 0.324 -- -18.15 1453 -- --
267.16 0.766 3.99 0.26 0.0824 -- -1.48 -- -0.0516 19.9 -- -- -- --
273.14 0.774 3.99 0.296 0.113 -- -- -- -0.0551 23.1 -- -- -- --
228.3 0.704 3.92 0.819 -- -1.63 -- -- 0.247 -- 7.028 1435 -- --
236.5 0.716 3.96 -- 0.523 -1.76 -- -- 0.13 19 -9.207 441 -- --
273.93 0.773 3.99 0.299 -- -- -- -- -0.0542 -- -- -- -- --
275.45 0.776 4 -- 0.115 -- -- -- -0.0881 23.3 -- -- -- --
243.57 0.727 3.95 -- -- -1.28 -- -- 0.104 -- 8.749 1417 -- --
276.28 0.776 4 -- -- -- -- -- -0.0873 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 211.59 temperature 10 720 > th dose dependent rect. 17 22
3 211.99 temperature 15 720 > th dose dependent rect. 18 19
8 212.16 temperature 30 1440 < th dose dependent rect. 8 1
9 212.20 temperature 15 1440 > th dose dependent rect. 8 1
15 212.92 wind 9 43200 > th dose dependent sin 16 NA
16 212.94 wind 9 43200 > th dose dependent rect. 20 1
21 213.27 wind 9 43200 > th dose dependent rect. 13 19
25 213.38 wind 9 43200 > th dose dependent rect. 11 21
28 213.49 humidity 90 14400 > th dose dependent rect. 21 2
32 213.76 wind 9 43200 > th dose independent rect. 20 1
41 214.30 wind 9 43200 < th dose independent rect. 20 1
53 214.74 temperature 30 720 < th dose dependent rect. 17 19
55 214.81 wind 9 43200 > th dose independent rect. 13 20
57 214.94 wind 9 43200 < th dose independent rect. 2 19
59 214.96 wind 9 43200 < th dose independent rect. 4 17
61 215.00 wind 9 43200 > th dose independent rect. 2 19
62 215.03 wind 9 43200 > th dose independent rect. 4 17
75 215.11 wind 9 43200 > th dose independent rect. 7 14
77 215.15 wind 9 43200 < th dose independent rect. 13 20
96 215.30 wind 9 43200 > th dose independent rect. 17 22
97 215.31 temperature 10 720 > th dose dependent rect. 1 23
98 215.32 wind 9 43200 < th dose independent rect. 17 22
114 215.52 wind 9 43200 > th dose independent rect. 11 23
132 215.62 wind 9 43200 < th dose independent rect. 13 23
168 215.83 wind 9 43200 > th dose independent rect. 8 19
171 215.84 wind 9 43200 < th dose independent rect. 20 23
183 215.89 humidity 60 14400 < th dose independent rect. 17 3
202 215.91 wind 9 43200 > th dose independent rect. 20 23
209 215.96 humidity 90 14400 < th dose independent rect. 18 1
224 216.01 wind 9 43200 > th dose independent rect. 4 23
237 216.07 wind 9 43200 > th dose independent no NA NA
242 216.08 wind 9 43200 < th dose independent rect. 4 23
261 216.16 wind 9 43200 < th dose independent rect. 8 23
263 216.18 wind 9 43200 < th dose independent no NA NA
326 216.72 wind 9 43200 > th dose dependent rect. 10 11
358 216.99 wind 9 43200 > th dose dependent rect. 10 13
361 217.03 humidity 90 14400 < th dose independent rect. 21 1
369 217.09 wind 9 43200 < th dose independent rect. 20 19
373 217.10 wind 7 43200 > th dose dependent rect. 4 17
375 217.12 wind 9 43200 > th dose independent sin 23 NA
388 217.21 temperature 10 720 > th dose dependent sin 8 NA
393 217.22 wind 7 43200 > th dose dependent rect. 6 15
401 217.25 wind 9 43200 > th dose independent rect. 8 11
406 217.26 wind 9 43200 > th dose independent sin 14 NA
415 217.31 temperature 15 720 > th dose dependent rect. 23 23
417 217.33 humidity 90 14400 > th dose dependent rect. 18 6
421 217.36 wind 9 43200 < th dose independent sin 23 NA
444 217.43 wind 9 43200 > th dose dependent rect. 10 17
457 217.48 wind 9 43200 > th dose independent rect. 20 19
460 217.48 temperature 15 720 > th dose dependent rect. 21 23
493 217.58 wind 7 43200 > th dose dependent rect. 20 22
523 217.72 atmosphere 1000 43200 < th dose dependent rect. 14 2
527 217.73 wind 7 43200 > th dose dependent rect. 17 23
568 217.85 temperature 10 720 > th dose dependent no NA NA
609 217.98 wind 7 43200 > th dose dependent rect. 4 14
614 218.02 temperature 10 720 > th dose dependent rect. 1 14
625 218.04 wind 7 43200 > th dose dependent rect. 10 23
632 218.06 wind 7 43200 > th dose dependent rect. 6 12
639 218.08 wind 9 43200 > th dose dependent rect. 17 13
643 218.08 wind 7 43200 > th dose dependent rect. 13 23
653 218.11 humidity 90 14400 > th dose independent rect. 18 1
659 218.14 wind 9 43200 > th dose dependent rect. 17 4
674 218.18 wind 7 43200 > th dose dependent no NA NA
681 218.19 wind 7 43200 > th dose dependent rect. 8 23
686 218.22 temperature 20 14400 < th dose independent rect. 21 1
700 218.29 wind 7 43200 > th dose dependent rect. 20 20
714 218.34 wind 7 43200 > th dose dependent sin 23 NA
718 218.35 temperature 25 4320 > th dose independent rect. 7 1
747 218.52 humidity 60 14400 > th dose independent rect. 17 13
761 218.56 humidity 70 14400 > th dose dependent rect. 18 1
774 218.60 temperature 20 14400 > th dose independent rect. 21 1
780 218.61 temperature 30 720 < th dose dependent sin 7 NA
788 218.63 humidity 60 14400 > th dose independent rect. 17 3
797 218.65 temperature 25 4320 < th dose independent rect. 7 1
807 218.68 wind 9 14400 > th dose dependent rect. 17 19
820 218.73 temperature 10 720 > th dose dependent rect. 8 23
835 218.79 temperature 30 4320 < th dose independent rect. 15 1
836 218.81 wind 9 43200 < th dose independent sin 14 NA
854 218.86 humidity 60 14400 < th dose dependent rect. 17 16
855 218.87 temperature 15 720 > th dose dependent rect. 12 23
868 218.96 temperature 25 1440 > th dose dependent rect. 18 1
878 218.99 wind 9 14400 > th dose dependent rect. 20 15
937 219.18 temperature 30 4320 > th dose independent rect. 15 1
947 219.21 temperature 10 1440 > th dose dependent rect. 18 1
959 219.24 wind 9 14400 > th dose independent rect. 20 15
999 219.35 atmosphere 1000 43200 > th dose independent rect. 11 1
1000 219.35 wind 9 43200 > th dose dependent rect. 17 7