BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0191700 Os05g0191700|J075086H24
(147 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256 110 3e-25
AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261 103 2e-23
AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257 99 6e-22
AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271 97 3e-21
AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258 97 4e-21
AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266 95 1e-20
AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252 93 6e-20
AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272 87 3e-18
AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273 77 2e-15
AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284 48 2e-06
>AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256
Length = 255
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 19 YDDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYSG 78
YDD F E+V +G+ A + RLY L +LG + LT R E +R T TNLR GYSG
Sbjct: 131 YDDNKFSEWVEQGTAPAFDASLRLYNALKKLGFTIILLTGRDEHQRTSTETNLRDAGYSG 190
Query: 79 WMKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTFK 138
W +LLL+ + G+ S +KS +R KL + GF I GN GDQWSD+ G R+FK
Sbjct: 191 WERLLLR-GPNDQGK---SATNYKSEQRSKLIEEGFKIRGNSGDQWSDLQGFAVADRSFK 246
Query: 139 LPDPLYYI 146
+P+P+YYI
Sbjct: 247 VPNPMYYI 254
>AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261
Length = 260
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 18 LYDDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYS 77
++D + F +V +G A+ + +LY++++ LG K + LT R E+ R ITV NLR G+
Sbjct: 135 VFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHLGYKVILLTGRRENHRVITVENLRNAGFH 194
Query: 78 GWMKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTF 137
W KL+L+ + + + +KS +R+++ G+ I GN GDQWSD+LG+ R+F
Sbjct: 195 NWDKLILR----SLDDRNKTATMYKSEKREEMVKEGYRIRGNSGDQWSDLLGSAMSERSF 250
Query: 138 KLPDPLYYI 146
KLP+P+YYI
Sbjct: 251 KLPNPMYYI 259
>AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257
Length = 256
Score = 99.4 bits (246), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 19 YDDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYSG 78
YD + E V +G + RLY+ L +LG + LT R E R++T NLR GY G
Sbjct: 132 YDSIKYNEVVEKGKDPGYDASLRLYKALKKLGFTIILLTGRDEGHRSVTEKNLRDAGYFG 191
Query: 79 WMKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTFK 138
W +LLL+ + G+ + +KS +R ++ G+TI GN GDQWSD+LG +R+FK
Sbjct: 192 WNRLLLR-GQNDQGK---TATQYKSEQRSQVVKEGYTIHGNTGDQWSDLLGFAVASRSFK 247
Query: 139 LPDPLYYIG 147
+P+P+YY+
Sbjct: 248 VPNPMYYVA 256
>AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271
Length = 270
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 6/111 (5%)
Query: 36 LPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYSGWMKLLLKPAVHTAGELL 95
LPET LY LL+LG++P+ ++ R + +TV NL+ G + W L+LKP G L
Sbjct: 164 LPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKP----NGSKL 219
Query: 96 GSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTFKLPDPLYYI 146
VV +KS R L G+ IVGNIGDQW+D++ G R FKLP+PLYY+
Sbjct: 220 TQVV-YKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 268
>AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258
Length = 257
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 18 LYDDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYS 77
L+D + F ++V G A+ + +LY+R+L LG K LT R E R +TV NL G+
Sbjct: 132 LFDHSEFDKWVERGVAPAIAPSLKLYQRVLDLGYKVFLLTGRKESHRLVTVENLINAGFQ 191
Query: 78 GWMKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTF 137
W KL+L+ + E +KS +R ++ G+ I GN GDQWSD+LG R+F
Sbjct: 192 NWDKLILR----SPEEQHKMATLYKSEKRDEMVKEGYRIRGNSGDQWSDLLGTSMSQRSF 247
Query: 138 KLPDPLYYI 146
KL +P+YYI
Sbjct: 248 KLANPMYYI 256
>AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266
Length = 265
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 36 LPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYSGWMKLLLKPAVHTAGELL 95
LPE LY+ +++LG++P+ L+ R + +N+T+ NL G + W L+LKP G L
Sbjct: 159 LPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKP----NGSNL 214
Query: 96 GSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTFKLPDPLYYI 146
VV +KS R+ L G+ IVGNIGDQW+D++ G R FKLP+PLYY+
Sbjct: 215 RQVV-YKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 263
>AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252
Length = 251
Score = 92.8 bits (229), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 19 YDDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDE-RNITVTNLRRQGYS 77
YD T FR + ++G A+ L+ +L++ G K +T R E+ R T+ NL QG++
Sbjct: 126 YDPTGFRTWAMKGESPAIQPVLELFYKLIETGFKVFLVTGRDEETLRQATLENLHNQGFT 185
Query: 78 GWMKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTF 137
G+ +L+++ TA S +K+ R+++ + G+ I GN+GDQWSD+ G G RTF
Sbjct: 186 GYERLIMR----TADNKRQSATTYKTRIRKEMMEEGYRIWGNVGDQWSDLQGEYSGDRTF 241
Query: 138 KLPDPLYYI 146
K+P+P+Y++
Sbjct: 242 KIPNPMYFV 250
>AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272
Length = 271
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 20 DDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYSGW 79
+ T F +++ + A+P ++LY + + G+K ++SR E R+ TV NL + GY GW
Sbjct: 148 NSTKFEDWIQKKKAPAVPHMKKLYHDIRERGIKIFLISSRKEYLRSATVDNLIQAGYYGW 207
Query: 80 MKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTFKL 139
L+L+ E V +KS +R+ L G+ + G +GDQWS G P RTFKL
Sbjct: 208 SNLMLRGLEDQQKE----VKQYKSEKRKWLMSLGYRVWGVMGDQWSSFAGCPLPRRTFKL 263
Query: 140 PDPLYYIG 147
P+ +YY+
Sbjct: 264 PNSIYYVA 271
>AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273
Length = 272
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 20 DDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYSGW 79
+ T F E+ G A+P +LY + + G K ++SR E R+ TV NL GY W
Sbjct: 149 NTTKFEEWQNSGKAPAVPHMVKLYHEIRERGFKIFLISSRKEYLRSATVENLIEAGYHSW 208
Query: 80 MKLLLKPAVHTAGELLGSVVAFKSGERQKLEDAGFTIVGNIGDQWSDILGAPEGARTFKL 139
LLL+ + SV +K+ R L G+ + G +G QW+ G P RTFKL
Sbjct: 209 SNLLLR----GEDDEKKSVSQYKADLRTWLTSLGYRVWGVMGAQWNSFSGCPVPKRTFKL 264
Query: 140 PDPLYYIG 147
P+ +YY+
Sbjct: 265 PNSIYYVA 272
>AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284
Length = 283
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 21/131 (16%)
Query: 18 LYDDTCFREYVVEGSGLALPETRRLYRRLLQLGVKPVFLTSRTEDERNITVTNLRRQGYS 77
L D+ + +Y+ E LY +L G V L+ R E ERN T+ L+ +GYS
Sbjct: 161 LEQDSYYMKYIEEAKHQKSILILALYSKLRSQGYSMVLLSRRPETERNATIEQLKSRGYS 220
Query: 78 GWMKLLLKPAVHTAGELLGSVVAFKSGERQKLE-DAGFTIVGNIGDQWSDILGAP---EG 133
W L++ + RQK E + G ++G IG+ D+L +
Sbjct: 221 DWSHLIMS----------------REDTRQKEELERGHRVIGVIGNHM-DVLRGQWNWQS 263
Query: 134 ARTFKLPDPLY 144
R FKLP Y
Sbjct: 264 KRLFKLPSLTY 274
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.141 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,289,387
Number of extensions: 130620
Number of successful extensions: 264
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 253
Number of HSP's successfully gapped: 10
Length of query: 147
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 58
Effective length of database: 8,666,545
Effective search space: 502659610
Effective search space used: 502659610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 107 (45.8 bits)