BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0514300 Os05g0514300|AK061747
(372 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0514300 Similar to Tubby-like protein 3 683 0.0
Os05g0560400 Tubby family protein 449 e-126
Os01g0759100 Tubby family protein 444 e-125
Os07g0667000 Similar to Tubby-like protein 3 373 e-103
Os03g0351400 Similar to Tubby-like protein 3 295 3e-80
Os05g0437900 Tubby family protein 241 5e-64
Os04g0687900 Similar to T24D18.17 protein (Tubby-like prote... 234 6e-62
Os08g0103300 Similar to Tubby-like protein 3 223 2e-58
Os12g0163400 Tubby family protein 219 2e-57
Os02g0705300 Tubby family protein 219 2e-57
Os01g0866800 Similar to F24P17.15 protein (Tubby-like prote... 219 3e-57
Os11g0163600 Tubby family protein 134 8e-32
>Os05g0514300 Similar to Tubby-like protein 3
Length = 372
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/372 (90%), Positives = 335/372 (90%)
Query: 1 MALWRCXXXXXXXXXXXXXXXXXXXXXXXPEIAPVSXXXXXXXXXXXXXXRWSRLLPELL 60
MALWRC PEIAPVS RWSRLLPELL
Sbjct: 1 MALWRCSSSWLSSVSRSSGGVGGGESKVSPEIAPVSGGEGEGEEEEGEEERWSRLLPELL 60
Query: 61 TEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRD 120
TEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRD
Sbjct: 61 TEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRD 120
Query: 121 APMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGS 180
APMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGS
Sbjct: 121 APMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGS 180
Query: 181 NSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGGNYEVGQVSY 240
NSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGGNYEVGQVSY
Sbjct: 181 NSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGGNYEVGQVSY 240
Query: 241 KFNFLKSRGPRRMQCNIQCPVGQSTASDPLKKLISTSSPLALRNKAPRWHEHLQCWCLNF 300
KFNFLKSRGPRRMQCNIQCPVGQSTASDPLKKLISTSSPLALRNKAPRWHEHLQCWCLNF
Sbjct: 241 KFNFLKSRGPRRMQCNIQCPVGQSTASDPLKKLISTSSPLALRNKAPRWHEHLQCWCLNF 300
Query: 301 HGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAI 360
HGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAI
Sbjct: 301 HGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAI 360
Query: 361 CLTSFGTKLACE 372
CLTSFGTKLACE
Sbjct: 361 CLTSFGTKLACE 372
>Os05g0560400 Tubby family protein
Length = 349
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/321 (67%), Positives = 253/321 (78%), Gaps = 8/321 (2%)
Query: 55 LLPELLTEIMRRVDA-GAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSL 113
LLPEL+ E++RRV+A G ERWP R+D+V+CACVCRRWR+AA +VVRP E GRITFPSSL
Sbjct: 27 LLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSL 86
Query: 114 KQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDC 173
KQPGP+D P+ CF++RNKK S FYLYL L DKGKFL+AARRFR G HTEY+IS D
Sbjct: 87 KQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDA 146
Query: 174 DDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSR------RFASKQINPN 227
DDL GSN+YVGKLRSDF GT F IYD+QPPYD AK S ++SS+ RF S++I P
Sbjct: 147 DDLSQGSNAYVGKLRSDFWGTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQ 206
Query: 228 VSGGNYEVGQVSYKFNFLKSRGPRRMQCNIQCPVGQSTASDPLK-KLISTSSPLALRNKA 286
+S GN+ VGQ+SYK+N LKSRGPRRM C ++CP Q T + LK K + + LRNKA
Sbjct: 207 ISAGNFNVGQISYKYNLLKSRGPRRMFCTMECPSTQETWENSLKTKSLRCTGTTVLRNKA 266
Query: 287 PRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTM 346
PRWHEHLQCWCLNFHGRVTVASVKNFQLVA A S P + DEETVILQFGK++ + FTM
Sbjct: 267 PRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVGDEETVILQFGKVDSNIFTM 326
Query: 347 DYRQPLSAFQAFAICLTSFGT 367
DYRQPLSAFQAFAICL+SF T
Sbjct: 327 DYRQPLSAFQAFAICLSSFET 347
>Os01g0759100 Tubby family protein
Length = 368
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/323 (67%), Positives = 255/323 (78%), Gaps = 7/323 (2%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
RWS L+P+LL +I+R V+AG+ERWPPRRDVVACA VCRRWRD AV+VV+PPLE G+ITFP
Sbjct: 50 RWSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFP 109
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIIS 170
SSLKQPGPRDAPM CFI+RNKKNSTF+LYL LTQ LTD KFLLAARR R G H EY I+
Sbjct: 110 SSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYAIT 169
Query: 171 YDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSG 230
+ D LF GS S VG L+S+F GTKF I D QPPY+GAK S+S R F +K P VS
Sbjct: 170 INSDGLFHGSQSCVGNLKSNFTGTKFTIRDWQPPYEGAKAFSSRSGRWFGNKHRCPLVST 229
Query: 231 GNYEVGQVSYKFNFLKSRGPRRMQCNIQCPVGQSTASDPLK-KLISTSSP--LALRNKAP 287
G+ EVG+VSYK++ L+ RGPRRM C++QCPV + TA DP K +S S P L L +K P
Sbjct: 230 GDVEVGEVSYKYSLLRPRGPRRMSCSVQCPVLKGTAVDPQDGKRLSNSIPSSLVLNSKVP 289
Query: 288 RWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMD 347
WHEHLQCWCLNFHGRV VASVKNFQL+AP +P ++TV+LQFGKI+DD FTMD
Sbjct: 290 SWHEHLQCWCLNFHGRVMVASVKNFQLIAPVEPGEP----SDKTVVLQFGKIDDDVFTMD 345
Query: 348 YRQPLSAFQAFAICLTSFGTKLA 370
YRQPLSAFQAFAICL++FGTKLA
Sbjct: 346 YRQPLSAFQAFAICLSNFGTKLA 368
>Os07g0667000 Similar to Tubby-like protein 3
Length = 406
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/354 (54%), Positives = 230/354 (64%), Gaps = 35/354 (9%)
Query: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
W++L PELL E++ RV+ WP RRDVVACA VCR WR +VR P G +TFP
Sbjct: 55 WTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPI 114
Query: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISY 171
SLKQPGPRDAPM CFI RN+ T+YLY+ LT ALTD GKFLLAAR+ R TEY+IS
Sbjct: 115 SLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISL 174
Query: 172 DCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGG 231
D +D+ ++SYVGKLRS+FLGTKF IYD+ PPY G S+ QS+R S ++P + G
Sbjct: 175 DMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAG 234
Query: 232 NYEVGQVSYKFNFLKSRGPRRMQCNIQ-CPVG-------------------QSTASDPLK 271
NY V +SY+ N L SRGPRRM C + PV +S S P
Sbjct: 235 NYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFF 294
Query: 272 K-------------LISTSSPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPA 318
K L S L L+NK+PRWHEHLQCWCLNFHGRVTVASVKNFQLVA +
Sbjct: 295 KSKSVRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVA-S 353
Query: 319 GTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
S+P + + VILQFGK+ D FTMDYR P+SAFQAFAICL+SF TK+ACE
Sbjct: 354 DESNPTN-QEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
>Os03g0351400 Similar to Tubby-like protein 3
Length = 296
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 191/300 (63%), Gaps = 43/300 (14%)
Query: 111 SSLK--QPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYI 168
SSL+ QPGPRD + CFIRRN+ T+YLY+ LT+AL D GKFLLAAR+ R T+Y+
Sbjct: 2 SSLRDVQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYL 61
Query: 169 ISYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNV 228
IS D D+ GSN+Y+GKLRS+FLGTKF +YD+ PPYDGA S+S+S+R Q++P V
Sbjct: 62 ISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGAVVSKSRSARVVGLNQVSPRV 121
Query: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQCNIQCPVGQSTASDPLKKLISTSSPLA------- 281
GNY V +SY+ N L +RGPRRM C I + S + K T PL+
Sbjct: 122 PAGNYPVSHISYELNVLGARGPRRMNC-IMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPS 180
Query: 282 ---------------------------LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQL 314
L+NK+PRWHE LQCWCLNF GRVTVASVKNFQL
Sbjct: 181 ISFFRSKSARIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQL 240
Query: 315 VAPAGTSDPWGIADEE--TVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
VA SD G ++E VILQFGKI D FTMDYR P+SAFQ+FAICL+SF TK+ACE
Sbjct: 241 VA----SDENGPTNQEQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
>Os05g0437900 Tubby family protein
Length = 445
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 152/207 (73%), Gaps = 2/207 (0%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
RW+ L PELL +++RR++A WP R+DVV+CA VC+ WR+ +V P CG++TFP
Sbjct: 58 RWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFP 117
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYII 169
SLKQPGPRD + CFI+R+K ST++LYL L+ A L D GKFLL+A+R R TEY+I
Sbjct: 118 LSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVI 177
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAK-PSRSQSSRRFASKQINPNV 228
S D D++ S++Y+GKLRS+FLGTKFIIYD+QP Y+GA P +SSRRF SK+++P +
Sbjct: 178 SMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKM 237
Query: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQC 255
G+Y + QV+Y+ N L +RGPRRM C
Sbjct: 238 PSGSYNIAQVTYELNVLGTRGPRRMHC 264
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 75/102 (73%), Gaps = 9/102 (8%)
Query: 279 PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV--------APAGTSDPWGIADEE 330
PL LRNKAPRWHE LQCWCLNF GRVT+ASVKNFQL+ S P +++
Sbjct: 345 PLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQP-APPEQD 403
Query: 331 TVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
+ILQFGK+ D FTMDYR PLSAFQAFAICL+SF TKLACE
Sbjct: 404 KIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
>Os04g0687900 Similar to T24D18.17 protein (Tubby-like protein TULP8)
Length = 462
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 152/210 (72%), Gaps = 2/210 (0%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
+W+ L PELL ++M+R++ WP R+DVVACA VC WRD +VR P CG++TFP
Sbjct: 55 KWAGLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFP 114
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDK-GKFLLAARRFRNGAHTEYII 169
SLKQPGPRD + CFI+R+K T++LYL L+ A+ D+ GKFLL+A+R R HT+YII
Sbjct: 115 VSLKQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYII 174
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKP-SRSQSSRRFASKQINPNV 228
S D ++ S+ Y+GKLRS+FLGTKFIIYD+QPPY+ S+ ++SRRF+S++++P V
Sbjct: 175 SMDSKNISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKV 234
Query: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQCNIQ 258
G Y + QV+Y+ N L +RGPRRMQC +
Sbjct: 235 PTGCYPIVQVNYELNVLGTRGPRRMQCAMH 264
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 79/127 (62%), Gaps = 29/127 (22%)
Query: 274 ISTSSPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSDPWGIADE---- 329
++ PL LRNKAPRWHE LQCWCLNF GRVTVASVKNFQL+A A G A E
Sbjct: 337 VNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIA-AAPQPSSGAASEPSQA 395
Query: 330 ------------------------ETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSF 365
+TVILQFGK+ D FTMDYR PLSAFQAFAICLTSF
Sbjct: 396 GQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSF 455
Query: 366 GTKLACE 372
TKLACE
Sbjct: 456 DTKLACE 462
>Os08g0103300 Similar to Tubby-like protein 3
Length = 451
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 149/210 (70%), Gaps = 2/210 (0%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
RW L PELL ++M+R++ G WP R+DVVACA VCR WR+ +V+ P CG++TFP
Sbjct: 58 RWVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFP 117
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYII 169
SLKQPGPRD + CFI+R+K T+YLYL L+ A L++ GKFLLAA+R R TEYII
Sbjct: 118 VSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYII 177
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYD-GAKPSRSQSSRRFASKQINPNV 228
S D ++ SN YVGK+RS+FLGTKF++YD+QPPY+ G+ S SRR +S++++P +
Sbjct: 178 SVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKL 237
Query: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQCNIQ 258
G+Y + V Y+ N L +RGPRRMQC +
Sbjct: 238 PTGSYPIAHVKYELNVLGTRGPRRMQCTMH 267
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 74/111 (66%), Gaps = 17/111 (15%)
Query: 279 PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPA-----------------GTS 321
PL LRNK PRWHE LQCWCLNF GRVTVASVKNFQL+A A S
Sbjct: 341 PLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHAS 400
Query: 322 DPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
+D VILQFGK+ D FTMDYR PLSAFQAFAICLTSF TKLACE
Sbjct: 401 SSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
>Os12g0163400 Tubby family protein
Length = 445
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 141/206 (68%), Gaps = 2/206 (0%)
Query: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
W+ L PELL +++ R++A WP R++VVACA VCR WRD +V+ P CG+ITFP
Sbjct: 59 WANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPV 118
Query: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYIIS 170
SLKQPGPR+ + CFI+R+K T+ LYL L+ A L + GKFLL+A+R+ TEY I
Sbjct: 119 SLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIF 178
Query: 171 YDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRS-QSSRRFASKQINPNVS 229
D+ SN Y+GKLRS+ LGTKF+IYD+QPP + A S+S ++SRRF S++++P
Sbjct: 179 MSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNP 238
Query: 230 GGNYEVGQVSYKFNFLKSRGPRRMQC 255
Y + QVSY+ N L +RGPRRM C
Sbjct: 239 SSTYSIAQVSYELNVLGTRGPRRMNC 264
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 78/107 (72%), Gaps = 9/107 (8%)
Query: 275 STSSPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA---PAGTS------DPWG 325
S PL LRNKAPRWHE LQCWCLNF GRVTVASVKNFQLVA PA + P
Sbjct: 339 SKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPP 398
Query: 326 IADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
D + VILQFGK+ D FTMDYR PLSAFQAFAICL+SF TKLACE
Sbjct: 399 PPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
>Os02g0705300 Tubby family protein
Length = 326
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 141/210 (67%), Gaps = 4/210 (1%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
RW+ L PELL ++++RV+A WP RR VVACA VCR WR+ VV+ ECGRITFP
Sbjct: 67 RWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITFP 126
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALT-DKGKFLLAARRFRNGAHTEYII 169
SLKQPGPR+ P+ CF+RR++ ST+ LYL L+ +L + K LLAAR+ R T ++I
Sbjct: 127 ISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRTSFVI 186
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAK-PSRSQSSRRFASKQINPNV 228
S +D S++YVGKL+ +FLGTKF I+DSQPP D P+ S R F KQ++P +
Sbjct: 187 SLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPPCDAVVLPNNRPSKRHF--KQVSPRL 244
Query: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQCNIQ 258
GNY V VSY+ L++RGPRRMQC +
Sbjct: 245 PLGNYNVATVSYELTVLRNRGPRRMQCTMH 274
>Os01g0866800 Similar to F24P17.15 protein (Tubby-like protein TULP9)
Length = 448
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
RW+ L PELL E++RR++A WP RR+VV A VCR WR+ V P CG++TFP
Sbjct: 58 RWASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFP 117
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALT-DKGKFLLAARRFRNGAHTEYII 169
S+KQPGPRD + C+I+RN+ ST++LYL L+ +T + GKF+LAA+R R TEY I
Sbjct: 118 VSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTI 177
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGA-KPSRSQSSRRFASKQINPNV 228
S ++ S + +GKLRS+FLGTKFIIYD+QPPY+GA P ++S+RF S +++P V
Sbjct: 178 SMVSGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKV 237
Query: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQCNIQ 258
Y + QVSY+ N L +RGPRRM+C +
Sbjct: 238 PSVTYNIAQVSYELNVLGTRGPRRMRCMMH 267
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 76/102 (74%), Gaps = 9/102 (8%)
Query: 279 PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGT--------SDPWGIADEE 330
PL LRNK PRWHE LQCWCLNF GRVT+ASVKNFQLVA S P G AD E
Sbjct: 348 PLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQP-GPADPE 406
Query: 331 TVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
VILQFGK+ D FTMDYR PLSAFQAFAICL+SF TKLACE
Sbjct: 407 KVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448
>Os11g0163600 Tubby family protein
Length = 317
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Query: 278 SPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA---PAGTS------DPWGIAD 328
+PL L+NKAPRWHE LQCWCLNF GRVTVASVKNFQL+A PA + P +
Sbjct: 214 TPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPE 273
Query: 329 EETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
+ VILQFGK+ D FTMDY PLSAFQAFAI L+SF TKLACE
Sbjct: 274 HDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 317
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 123 MHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSN 181
M CFIRR+K T+YLYLSL A L D GKFLL+A+R + TEY+IS + ++L +N
Sbjct: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
Query: 182 SYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRS-QSSRRFASKQINPNVSGGNYEVGQVSY 240
+ +GKLRS+FLGTKF+IYD+ PY+ S+S ++SRRF++K + Y + +SY
Sbjct: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPC-STYSIANISY 119
Query: 241 KFNFLKSRGPRRMQC 255
+ N +RGPRRM C
Sbjct: 120 ELNVFGTRGPRRMCC 134
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,371,293
Number of extensions: 517480
Number of successful extensions: 1211
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1187
Number of HSP's successfully gapped: 20
Length of query: 372
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 270
Effective length of database: 11,709,973
Effective search space: 3161692710
Effective search space used: 3161692710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)