BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0437900 Os05g0437900|AK103583
(445 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0437900 Tubby family protein 789 0.0
Os01g0866800 Similar to F24P17.15 protein (Tubby-like prote... 657 0.0
Os04g0687900 Similar to T24D18.17 protein (Tubby-like prote... 592 e-169
Os12g0163400 Tubby family protein 577 e-165
Os08g0103300 Similar to Tubby-like protein 3 571 e-163
Os07g0667000 Similar to Tubby-like protein 3 433 e-121
Os11g0163600 Tubby family protein 360 1e-99
Os03g0351400 Similar to Tubby-like protein 3 331 5e-91
Os02g0705300 Tubby family protein 275 6e-74
Os05g0514300 Similar to Tubby-like protein 3 241 7e-64
Os05g0560400 Tubby family protein 219 2e-57
Os01g0759100 Tubby family protein 200 2e-51
>Os05g0437900 Tubby family protein
Length = 445
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/445 (87%), Positives = 389/445 (87%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
Query: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL
Sbjct: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
Query: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD
Sbjct: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
Query: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG
Sbjct: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
Query: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXXXXXXXX 300
SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRA
Sbjct: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTT 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ 360
AGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ
Sbjct: 301 SFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ 360
Query: 361 CWCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXXXXXXXXEQDKIILQFGKVAKDMFTMD 420
CWCLNFRGRVTIASVKNFQLI EQDKIILQFGKVAKDMFTMD
Sbjct: 361 CWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMD 420
Query: 421 YRYPLSAFQAFAICLSSFDTKLACE 445
YRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 YRYPLSAFQAFAICLSSFDTKLACE 445
>Os01g0866800 Similar to F24P17.15 protein (Tubby-like protein TULP9)
Length = 448
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/448 (71%), Positives = 355/448 (79%), Gaps = 3/448 (0%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
MSFRSIVRDVRD FGSLSRRSFEVTLA L GLTGHH+GK+QS++ EL D+ II ESRWA
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWA 60
Query: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
SLPPELLR+VIRRLEA ESTWPSR++VV AAVC+ WREMCKE VLSPEFCGKLTFP+S+
Sbjct: 61 SLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSI 120
Query: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
KQPGPRDGMIQC+IKR++SKSTYHLYLCLS V A+ GKF+L+AKRHRKTTCTEY ISM
Sbjct: 121 KQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMV 180
Query: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
+ NISRSS T IGKLRSNFLGTKFIIYDTQP YNGAV+P VGR+S+RFNS KVSPK+PS
Sbjct: 181 SGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKVPSV 240
Query: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXXXXXXXX 300
+YNIAQV+YELNVLGTRGPRRM C+MHSIPASSVEPGGIVPGQPEQIVPRA
Sbjct: 241 TYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTT 300
Query: 301 XXXXXXXXXXXXXXXX---XXXXXXXXXXXXAGGTINGDEEGQNKERPLVLRNKAPRWHE 357
+G + GD+ G+ KERPLVLRNK PRWHE
Sbjct: 301 SFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHE 360
Query: 358 QLQCWCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXXXXXXXXEQDKIILQFGKVAKDMF 417
QLQCWCLNFRGRVTIASVKNFQL+ + +K+ILQFGKVA+DMF
Sbjct: 361 QLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPEKVILQFGKVARDMF 420
Query: 418 TMDYRYPLSAFQAFAICLSSFDTKLACE 445
TMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 TMDYRYPLSAFQAFAICLSSFDTKLACE 448
>Os04g0687900 Similar to T24D18.17 protein (Tubby-like protein TULP8)
Length = 462
Score = 592 bits (1525), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/470 (62%), Positives = 337/470 (71%), Gaps = 33/470 (7%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
MSFRSIVRD RDSFG+LS+RSFEV + SG +G HRGKS EL D ++ Q+S+WA
Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKI---SGFSGRHRGKSIGPSSELDDTPVVAQQSKWA 57
Query: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
LPPELLRDV++RLE +S WPSRKDVV+CA+VC WR+MCK+IV +PEFCGKLTFP+SL
Sbjct: 58 GLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSL 117
Query: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
KQPGPRDG+IQCFIKRDKSK TYHLYLCLS+AVL ++GKFLLSAKR R+TT T+Y+ISMD
Sbjct: 118 KQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMD 177
Query: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
+ NISRSSS YIGKLRSNFLGTKFIIYDTQP YN + R+SRRF+S+KVSPK+P+G
Sbjct: 178 SKNISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKVPTG 237
Query: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXXXXXXXX 300
Y I QV YELNVLGTRGPRRM C MHSIPAS+VEPGGIVPGQP++++PR
Sbjct: 238 CYPIVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPR-----LFEES 292
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTINGDEEGQ-----NKERPLVLRNKAPRW 355
GG + G E+ Q NKERPLVLRNKAPRW
Sbjct: 293 FRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRW 352
Query: 356 HEQLQCWCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXX--------------------X 395
HEQLQCWCLNFRGRVT+ASVKNFQLI
Sbjct: 353 HEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSS 412
Query: 396 XXXXXEQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
D +ILQFGKVAKDMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 413 SSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
>Os12g0163400 Tubby family protein
Length = 445
Score = 577 bits (1488), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/453 (63%), Positives = 332/453 (73%), Gaps = 16/453 (3%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADL------II 54
MSFRSIVRDVRD FGSLSRR FEV L GH RG+S S VHEL D ++
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRL------VGHRRGRSHSAVHELRDGHAAAAAADVV 54
Query: 55 QESRWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKL 114
Q S WA+LPPELLRDVI RLEASE+ WPSRK+VV+CAAVC+ WR+MC+EIV +PEFCGK+
Sbjct: 55 QSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKI 114
Query: 115 TFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTE 174
TFP+SLKQPGPR+G IQCFIKRDKS TY+LYLCLS+AVL +SGKFLLSAKR+ + TCTE
Sbjct: 115 TFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTE 174
Query: 175 YVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVS 234
Y I M ADN SRSS+ YIGKLRSN LGTKF+IYDTQP N A + G++SRRF S+KVS
Sbjct: 175 YTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVS 234
Query: 235 PKMPSGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXX 294
PK PS +Y+IAQV+YELNVLGTRGPRRM+CVMHSIPASS+E GG VP QP+ ++ R+
Sbjct: 235 PKNPSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARS-LD 293
Query: 295 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTINGDEEGQNKERPLVLRNKAPR 354
GG GD + ++KERPL+LRNKAPR
Sbjct: 294 ESFGSISFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSD-ESKERPLILRNKAPR 352
Query: 355 WHEQLQCWCLNFRGRVTIASVKNFQLIXXX--XXXXXXXXXXXXXXXXEQDKIILQFGKV 412
WHEQLQCWCLNF+GRVT+ASVKNFQL+ + DK+ILQFGKV
Sbjct: 353 WHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKV 412
Query: 413 AKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
AKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 413 AKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
>Os08g0103300 Similar to Tubby-like protein 3
Length = 451
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 285/455 (62%), Positives = 334/455 (73%), Gaps = 14/455 (3%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
MSFRSIVRDVRDSFGSLSRRSFEV ++GL GL+GHHRGKS ++ EL D +++ +SRW
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWV 60
Query: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
LPPELLRDV++RLE ES WPSRKDVV+CAAVC+ WRE+CK+IV SPE CGKLTFP+SL
Sbjct: 61 GLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSL 120
Query: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
KQPGPRDG+IQCFIKRDKSK TY+LYLCLS AVL+++GKFLL+AKR+R+ T TEY+IS+D
Sbjct: 121 KQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVD 180
Query: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
+ NISRSS+ Y+GK+RSNFLGTKF++YDTQP YN + SRR +S++VSPK+P+G
Sbjct: 181 SKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKLPTG 240
Query: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXXXXXXXX 300
SY IA V YELNVLGTRGPRRM C MHSIPAS+V+P G+VPGQPEQ++P
Sbjct: 241 SYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTN 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ 360
G D+ + KERPLVLRNK PRWHEQLQ
Sbjct: 301 TSSRFSFMDRSLDFSSSRFSEISGSANQQG----EDDIPEAKERPLVLRNKVPRWHEQLQ 356
Query: 361 CWCLNFRGRVTIASVKNFQLIXXX----------XXXXXXXXXXXXXXXXEQDKIILQFG 410
CWCLNFRGRVT+ASVKNFQLI + K+ILQFG
Sbjct: 357 CWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFG 416
Query: 411 KVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
KV KDMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 417 KVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
>Os07g0667000 Similar to Tubby-like protein 3
Length = 406
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/445 (49%), Positives = 286/445 (64%), Gaps = 39/445 (8%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
MSFRS++++V+ G++SRR F G ++ E A L+++ES W
Sbjct: 1 MSFRSVIQEVKGEIGAISRRGFR----SRPGRVRRVAAAAEEPPDESSAAALVMRESCWT 56
Query: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
LPPELLR+V+ R+E SE WP R+DVV+CA VC++WR + +EIV +PE G LTFP+SL
Sbjct: 57 QLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISL 116
Query: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
KQPGPRD ++CFI R+++ TY+LY+ L+ A L D GKFLL+A++ R+TTCTEY+IS+D
Sbjct: 117 KQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDA-LTDDGKFLLAARKCRRTTCTEYLISLD 175
Query: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
++IS+ + +Y+GKLRSNFLGTKF IYD P Y G VI G+S+R S +SP++P+G
Sbjct: 176 MNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISK-GQSARVIGSNHLSPRIPAG 234
Query: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXXXXXXXX 300
+Y ++ ++YELNVLG+RGPRRMHC M SIP S++E GG P Q E P +
Sbjct: 235 NYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTE--FPLSYHESFTSIP 292
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ 360
T NG + LVL+NK+PRWHE LQ
Sbjct: 293 FFKSKSVRANNSTASLL--------------TQNGSK--------LVLKNKSPRWHEHLQ 330
Query: 361 CWCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXXXXXXXXEQDKIILQFGKVAKDMFTMD 420
CWCLNF GRVT+ASVKNFQL+ E D +ILQFGKV KDMFTMD
Sbjct: 331 CWCLNFHGRVTVASVKNFQLV---------ASDESNPTNQEHDDVILQFGKVGKDMFTMD 381
Query: 421 YRYPLSAFQAFAICLSSFDTKLACE 445
YRYP+SAFQAFAICLSSFDTK+ACE
Sbjct: 382 YRYPISAFQAFAICLSSFDTKIACE 406
>Os11g0163600 Tubby family protein
Length = 317
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/319 (57%), Positives = 215/319 (67%), Gaps = 5/319 (1%)
Query: 130 IQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSS 189
+QCFI+RDKS TY+LYL L +AVL D+GKFLLSAKR+ TCTEYVISM+A+N+SRS++
Sbjct: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
Query: 190 TYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSGSYNIAQVTY 249
T IGKLRSNFLGTKF+IYDT YN G++SRRF S K + K P +Y+IA ++Y
Sbjct: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIANISY 119
Query: 250 ELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXXXXXXXXXXXXXXXXX 309
ELNV GTRGPRRM C+MHSIPASS+E GG VP QP+ I+ +
Sbjct: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVMD 179
Query: 310 XXXXXXXXXXXXXXXXXX-XAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRG 368
GG + D+E + KE PL+L+NKAPRWHEQLQCWCLNFRG
Sbjct: 180 HSMHFSSAQFSDISIGDGPRIGGRVLSDDE-ECKETPLILQNKAPRWHEQLQCWCLNFRG 238
Query: 369 RVTIASVKNFQLIXXX--XXXXXXXXXXXXXXXXEQDKIILQFGKVAKDMFTMDYRYPLS 426
RVT+ASVKNFQLI E DK+ILQFGKVAKDMFTMDY YPLS
Sbjct: 239 RVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLS 298
Query: 427 AFQAFAICLSSFDTKLACE 445
AFQAFAI LSSFDTKLACE
Sbjct: 299 AFQAFAISLSSFDTKLACE 317
>Os03g0351400 Similar to Tubby-like protein 3
Length = 296
Score = 331 bits (849), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/324 (51%), Positives = 215/324 (66%), Gaps = 35/324 (10%)
Query: 122 QPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDA 181
QPGPRDG ++CFI+R+++ TY+LY+ L+ A LAD GKFLL+A++ RK TCT+Y+IS+D
Sbjct: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEA-LADDGKFLLAARKCRKPTCTDYLISLDM 66
Query: 182 DNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSGS 241
++S+ S+TYIGKLRSNFLGTKF +YD P Y+GAV+ RS+R +VSP++P+G+
Sbjct: 67 SDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGAVVSK-SRSARVVGLNQVSPRVPAGN 125
Query: 242 YNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAXXXXXXXXXX 301
Y ++ ++YELNVLG RGPRRM+C+M SIP S+V+ GG P Q E P +
Sbjct: 126 YPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTE--FPLSGLDSFPSISF 183
Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQC 361
Q +E+ LVL+NK+PRWHEQLQC
Sbjct: 184 FRSKSARIDSATSQLST---------------------QKEEK-LVLKNKSPRWHEQLQC 221
Query: 362 WCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXXXXXXXXEQDKIILQFGKVAKDMFTMDY 421
WCLNFRGRVT+ASVKNFQL+ EQDK+ILQFGK+ KD+FTMDY
Sbjct: 222 WCLNFRGRVTVASVKNFQLV---------ASDENGPTNQEQDKVILQFGKIGKDLFTMDY 272
Query: 422 RYPLSAFQAFAICLSSFDTKLACE 445
RYP+SAFQ+FAICLSSFDTK+ACE
Sbjct: 273 RYPISAFQSFAICLSSFDTKIACE 296
>Os02g0705300 Tubby family protein
Length = 326
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 204/290 (70%), Gaps = 11/290 (3%)
Query: 1 MSFRSIVRDVR---DSFGSLSRRSFEVTLAGLSGLTGHH------RGKSQSTVHELCDAD 51
MS +SIVR++R D GS+SRR+ + G G + H + +L +
Sbjct: 1 MSLKSIVRELREMRDGIGSMSRRAADGRAGGGRGGSRHSWPVLWSEQQQPPQQQQLQRQE 60
Query: 52 LIIQESRWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFC 111
Q+ RWA+LPPELL DVI+R+EASE+TWP+R+ VV+CAAVC++WRE+ KE+V + E C
Sbjct: 61 HQQQQGRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEEC 120
Query: 112 GKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTT 171
G++TFP+SLKQPGPR+ +QCF++RD++ STY LYL LS ++ ++ K LL+A++ R+ T
Sbjct: 121 GRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRAT 180
Query: 172 CTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSK 231
T +VIS+ +++ S SSSTY+GKL+ NFLGTKF I+D+QP + V+P S R F K
Sbjct: 181 RTSFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPPCDAVVLPNNRPSKRHF--K 238
Query: 232 KVSPKMPSGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVP 281
+VSP++P G+YN+A V+YEL VL RGPRRM C MHSIPA ++ GG P
Sbjct: 239 QVSPRLPLGNYNVATVSYELTVLRNRGPRRMQCTMHSIPALCIQEGGKAP 288
>Os05g0514300 Similar to Tubby-like protein 3
Length = 372
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 152/207 (73%), Gaps = 2/207 (0%)
Query: 58 RWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFP 117
RW+ L PELL +++RR++A WP R+DVV+CA VC+ WR+ +V P CG++TFP
Sbjct: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
Query: 118 LSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVI 177
SLKQPGPRD + CFI+R+K ST++LYL L+ A L D GKFLL+A+R R TEY+I
Sbjct: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYII 169
Query: 178 SMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKM 237
S D D++ S++Y+GKLRS+FLGTKFIIYD+QP Y+GA P +SSRRF SK+++P +
Sbjct: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAK-PSRSQSSRRFASKQINPNV 228
Query: 238 PSGSYNIAQVTYELNVLGTRGPRRMHC 264
G+Y + QV+Y+ N L +RGPRRM C
Sbjct: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQC 255
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 73/101 (72%), Gaps = 7/101 (6%)
Query: 345 PLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXXXXXXXXEQDK 404
PL LRNKAPRWHE LQCWCLNF GRVT+ASVKNFQL+ +++
Sbjct: 279 PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV-------APAGTSDPWGIADEET 331
Query: 405 IILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
+ILQFGK+ D FTMDYR PLSAFQAFAICL+SF TKLACE
Sbjct: 332 VILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
>Os05g0560400 Tubby family protein
Length = 349
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 148/212 (69%), Gaps = 7/212 (3%)
Query: 62 LPPELLRDVIRRLEASEST-WPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
L PEL+ +V+RR+EAS WP+RKD+VSCA VC+ WRE +V G++TFP SL
Sbjct: 27 LLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSL 86
Query: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
KQPGP+D IQCF+KR+K KS ++LYL L + D GKFL++A+R R+ TEYVIS+D
Sbjct: 87 KQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTM-DKGKFLMAARRFRRGPHTEYVISLD 145
Query: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSR-----RFNSKKVSP 235
AD++S+ S+ Y+GKLRS+F GT F IYD QP Y+ A S R RF S+++ P
Sbjct: 146 ADDLSQGSNAYVGKLRSDFWGTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICP 205
Query: 236 KMPSGSYNIAQVTYELNVLGTRGPRRMHCVMH 267
++ +G++N+ Q++Y+ N+L +RGPRRM C M
Sbjct: 206 QISAGNFNVGQISYKYNLLKSRGPRRMFCTME 237
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 7/94 (7%)
Query: 347 VLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXXXXXXXXEQDKII 406
VLRNKAPRWHE LQCWCLNF GRVT+ASVKNFQL+ +++ +I
Sbjct: 261 VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV-------ATADPSHPDSVGDEETVI 313
Query: 407 LQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDT 440
LQFGKV ++FTMDYR PLSAFQAFAICLSSF+T
Sbjct: 314 LQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
>Os01g0759100 Tubby family protein
Length = 368
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 144/223 (64%), Gaps = 4/223 (1%)
Query: 56 ESRWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLT 115
E RW++L P+LL D++R +EA WP R+DVV+CA+VC+ WR++ +V P GK+T
Sbjct: 48 EERWSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKIT 107
Query: 116 FPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEY 175
FP SLKQPGPRD +QCFIKR+K ST+ LYL L T L D KFLL+A+R R+ EY
Sbjct: 108 FPSSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGL-TQELTDDEKFLLAARRCRRGLHKEY 166
Query: 176 VISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSP 235
I++++D + S + +G L+SNF GTKF I D QP Y GA RS R F +K P
Sbjct: 167 AITINSDGLFHGSQSCVGNLKSNFTGTKFTIRDWQPPYEGAKA-FSSRSGRWFGNKHRCP 225
Query: 236 KMPSGSYNIAQVTYELNVLGTRGPRRMHCVMHS--IPASSVEP 276
+ +G + +V+Y+ ++L RGPRRM C + + ++V+P
Sbjct: 226 LVSTGDVEVGEVSYKYSLLRPRGPRRMSCSVQCPVLKGTAVDP 268
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 65/98 (66%), Gaps = 11/98 (11%)
Query: 346 LVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIXXXXXXXXXXXXXXXXXXXEQDKI 405
LVL +K P WHE LQCWCLNF GRV +ASVKNFQLI +
Sbjct: 282 LVLNSKVPSWHEHLQCWCLNFHGRVMVASVKNFQLI-----------APVEPGEPSDKTV 330
Query: 406 ILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLA 443
+LQFGK+ D+FTMDYR PLSAFQAFAICLS+F TKLA
Sbjct: 331 VLQFGKIDDDVFTMDYRQPLSAFQAFAICLSNFGTKLA 368
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,602,562
Number of extensions: 514370
Number of successful extensions: 1323
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1294
Number of HSP's successfully gapped: 22
Length of query: 445
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 341
Effective length of database: 11,605,545
Effective search space: 3957490845
Effective search space used: 3957490845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)