BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0389800 Os05g0389800|AK108808
(1070 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA he... 1849 0.0
Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA he... 722 0.0
Os07g0508000 Similar to ADR224Wp 640 0.0
Os01g0212100 ATP-dependent helicase, DEAH-box family protein 600 e-171
Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA he... 599 e-171
Os03g0314100 Helicase, C-terminal domain containing protein 535 e-152
Os11g0310800 ATP-dependent helicase, DEAH-box family protein 501 e-141
Os06g0192500 ATP-dependent helicase, DEAH-box family protein 335 1e-91
Os02g0736600 ATP-dependent helicase, DEAH-box family protein 190 6e-48
Os01g0767700 Similar to DEIH-box RNA/DNA helicase 177 3e-44
Os04g0432300 Double-stranded RNA binding domain containing ... 162 1e-39
Os03g0282700 DEAD/DEAH box helicase, N-terminal domain cont... 162 1e-39
Os01g0315300 125 1e-28
Os11g0196100 122 2e-27
Os01g0118100 Similar to Maleless protein 76 2e-13
>Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1070
Score = 1849 bits (4790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 926/1070 (86%), Positives = 926/1070 (86%)
Query: 1 MAASDDGQLRTWVSDRLMALLGYSQGLVARLVVRLARECASAGDLAARLVDLAGFPPSPD 60
MAASDDGQLRTWVSDRLMALLGYSQGLVARLVVRLARECASAGDLAARLVDLAGFPPSPD
Sbjct: 1 MAASDDGQLRTWVSDRLMALLGYSQGLVARLVVRLARECASAGDLAARLVDLAGFPPSPD 60
Query: 61 TAAFAEDVYGRVPRSCGGGGDDAGVSEYXXXXXXXXXXXXXXSTIKLLDDDGEIGVSASP 120
TAAFAEDVYGRVPRSCGGGGDDAGVSEY STIKLLDDDGEIGVSASP
Sbjct: 61 TAAFAEDVYGRVPRSCGGGGDDAGVSEYQRQMQEAAAMAKKQSTIKLLDDDGEIGVSASP 120
Query: 121 SSGGRKRFRRKAVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIERAQLERNIR 180
SSGGRKRFRRKAVGE QIERAQLERNIR
Sbjct: 121 SSGGRKRFRRKAVGEDDDDAGRNARRRRSPDDEEEDGDAGEEEEMERDQIERAQLERNIR 180
Query: 181 ERDAASXXXXXXXXXXXXEQGELARRSDAMDKNDTSGXXXXXXXXXXXXXKEKKVEEMRD 240
ERDAAS EQGELARRSDAMDKNDTSG KEKKVEEMRD
Sbjct: 181 ERDAASTRRLTDRKTTKREQGELARRSDAMDKNDTSGLRRLSRRAYLQRRKEKKVEEMRD 240
Query: 241 EIVDHEFLFPGVQLTAAEERDMRHKKQVYGLVHDRDDYYRMPDAYDAAANVDQEKRFSVX 300
EIVDHEFLFPGVQLTAAEERDMRHKKQVYGLVHDRDDYYRMPDAYDAAANVDQEKRFSV
Sbjct: 241 EIVDHEFLFPGVQLTAAEERDMRHKKQVYGLVHDRDDYYRMPDAYDAAANVDQEKRFSVA 300
Query: 301 XXXXXXXXXXXXDGKTANALSEQEAWEEQQIRKSRLQFGSMDRGRRGDEYELLFDDGVEF 360
DGKTANALSEQEAWEEQQIRKSRLQFGSMDRGRRGDEYELLFDDGVEF
Sbjct: 301 RRRYEEPAEAARDGKTANALSEQEAWEEQQIRKSRLQFGSMDRGRRGDEYELLFDDGVEF 360
Query: 361 VRSTVMXXXXXXXXXXXXXXXXXXXXXXXXXXXKATLQDERKTLPVYKLKDDLLKAIDEH 420
VRSTVM KATLQDERKTLPVYKLKDDLLKAIDEH
Sbjct: 361 VRSTVMAGTAPADDDDTAAAAAADEYHAEAMDAKATLQDERKTLPVYKLKDDLLKAIDEH 420
Query: 421 KVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQPXXXXXXXXXXXXXEEMGVKLG 480
KVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQP EEMGVKLG
Sbjct: 421 KVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQPRRVAAMSVAARVAEEMGVKLG 480
Query: 481 HEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLGSYSVVVVDEAHERTLATDILFG 540
HEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLGSYSVVVVDEAHERTLATDILFG
Sbjct: 481 HEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLGSYSVVVVDEAHERTLATDILFG 540
Query: 541 LVKDIARLRPDMKLLISSATLNADKFSDFFDAAPVFRIPGRRFEVGIHYTVAPEADYIDA 600
LVKDIARLRPDMKLLISSATLNADKFSDFFDAAPVFRIPGRRFEVGIHYTVAPEADYIDA
Sbjct: 541 LVKDIARLRPDMKLLISSATLNADKFSDFFDAAPVFRIPGRRFEVGIHYTVAPEADYIDA 600
Query: 601 AVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRVLGGKVAELVICPIYANLP 660
AVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRVLGGKVAELVICPIYANLP
Sbjct: 601 AVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRVLGGKVAELVICPIYANLP 660
Query: 661 AELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFCKVKSYNPRTGMESLLVA 720
AELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFCKVKSYNPRTGMESLLVA
Sbjct: 661 AELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFCKVKSYNPRTGMESLLVA 720
Query: 721 PVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVPEIQRSNLASVVLALKALGI 780
PVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVPEIQRSNLASVVLALKALGI
Sbjct: 721 PVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVPEIQRSNLASVVLALKALGI 780
Query: 781 NDLVGFDFMDPPPAESLLRALEELFALGALNSRGELTKTGRRMAEFPLDPMLSKAIVASE 840
NDLVGFDFMDPPPAESLLRALEELFALGALNSRGELTKTGRRMAEFPLDPMLSKAIVASE
Sbjct: 781 NDLVGFDFMDPPPAESLLRALEELFALGALNSRGELTKTGRRMAEFPLDPMLSKAIVASE 840
Query: 841 RYGCSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAES 900
RYGCSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAES
Sbjct: 841 RYGCSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAES 900
Query: 901 GYSPQWCRESFVQHRTMRRARDVRDQLGALLERVEIAPCSSAGGGDLDAVRKAVTAGYFR 960
GYSPQWCRESFVQHRTMRRARDVRDQLGALLERVEIAPCSSAGGGDLDAVRKAVTAGYFR
Sbjct: 901 GYSPQWCRESFVQHRTMRRARDVRDQLGALLERVEIAPCSSAGGGDLDAVRKAVTAGYFR 960
Query: 961 HAARLQRDGSYRAVKSRQTVFVHPSSGVAQAPPRWALYHELVLTTKEYMRQVTELKPEWL 1020
HAARLQRDGSYRAVKSRQTVFVHPSSGVAQAPPRWALYHELVLTTKEYMRQVTELKPEWL
Sbjct: 961 HAARLQRDGSYRAVKSRQTVFVHPSSGVAQAPPRWALYHELVLTTKEYMRQVTELKPEWL 1020
Query: 1021 VEIAPHYYERKDVDXXXXXXXXXXXXXXXXXXXGSTPTKQTPNLNSFFDV 1070
VEIAPHYYERKDVD GSTPTKQTPNLNSFFDV
Sbjct: 1021 VEIAPHYYERKDVDEPEPKKTAAATTPQEQTTAGSTPTKQTPNLNSFFDV 1070
>Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1084
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/639 (53%), Positives = 466/639 (72%), Gaps = 8/639 (1%)
Query: 394 KATLQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKK 453
+ ++ ++R++LP+++LK++L++A+ +++VL+V+GETGSGKTTQ+ QYL E GY G K
Sbjct: 421 RLSILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRG--K 478
Query: 454 VACTQPXXXXXXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLG 513
+ACTQP EE G +LG EVGYSIRF+D T TVIKYMTDGMLLRE L
Sbjct: 479 IACTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILL 538
Query: 514 EPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFSDFFDAA 573
+ DL SYSVV++DEAHERT+ TDILF L+K + R R D+KL+++SATL+A+KFS +F
Sbjct: 539 DTDLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDC 598
Query: 574 PVFRIPGRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVE 633
+F IPGR + V I Y+ PE+DY+ AA++TV Q+H+TEP G DILLFLTGQEEI+
Sbjct: 599 NIFTIPGRTYPVEILYSKQPESDYMHAALLTVSQIHLTEPEG--DILLFLTGQEEIDHAC 656
Query: 634 EILRHRLRVLGGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDG 693
+ L R++ LG V EL+I +Y+ PAE+Q+KIFEP P G RKVV+ATNIAE S+TIDG
Sbjct: 657 QCLYERMKSLGRNVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDG 716
Query: 694 IKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVS 753
I YV+DPGF K+ YNP+ G++SL++ P+S+ASA+QRAGR+GRTGPG+C+RLYTE + +
Sbjct: 717 IYYVIDPGFAKLNVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 776
Query: 754 DLDDDAVPEIQRSNLASVVLALKALGINDLVGFDFMDPPPAESLLRALEELFALGALNSR 813
++ PEIQR NL VL +KA+GINDL+ FDFMDPP +SL+ A+E+L+ LGAL+
Sbjct: 777 EMPPTTTPEIQRINLGETVLNMKAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEE 836
Query: 814 GELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVHAD 873
G LT+ GRRMAEFP +P LSK ++AS GCS+E++TI AM+ GN +FYRPR+K+ AD
Sbjct: 837 GLLTRVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQAD 895
Query: 874 AARRAFHAGNAGDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALLER 933
R F GDH+ LL VY AW +S WC E+FVQ ++RRA+DVR QL ++++
Sbjct: 896 RKRGNFFQPE-GDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDK 954
Query: 934 VEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQRDGSYRAVKSRQTVFVHPSSGVAQAPP 993
++ S+ G DL VRKA+TAG+F HAAR G YR + Q V++HP+S + Q P
Sbjct: 955 YKLNVVSA--GNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQQP 1012
Query: 994 RWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYERKD 1032
W +YHE+V+TTKEYMR+VT + P WLVE+AP +Y D
Sbjct: 1013 EWVIYHEVVMTTKEYMREVTAIDPRWLVELAPRFYRSAD 1051
>Os07g0508000 Similar to ADR224Wp
Length = 1280
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/645 (50%), Positives = 446/645 (69%), Gaps = 14/645 (2%)
Query: 396 TLQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVA 455
+L +R+ LP++ ++DDLL+ + E++V++VVGETGSGKTTQ+ QYLHE GYT G V
Sbjct: 575 SLSQQRQYLPIFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDGYTTTG--IVG 632
Query: 456 CTQPXXXXXXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEP 515
CTQP EEM +LGH+VGY+IRFED TS T+IKYMTDG+LLRE L +
Sbjct: 633 CTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDA 692
Query: 516 DLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFSDFFDAAPV 575
DL Y V+V+DEAHER+L TD+LFG++K + R D KL+++SATLNADKFS FF PV
Sbjct: 693 DLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPV 752
Query: 576 FRIPGRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEI 635
F IPGR F V I ++ P DY++AAV + +H+T PG DIL+F+TGQEEIE
Sbjct: 753 FHIPGRTFPVNIMFSKTPCEDYVEAAVKQAMTIHITSGPG--DILIFMTGQEEIEATCYA 810
Query: 636 LRHRLRVL----GGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTI 691
L RL L V +L I PIY+ LPA+LQAKIF+ A G RK ++ATNIAETSLT+
Sbjct: 811 LAERLEQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTV 870
Query: 692 DGIKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNF 751
DGI YV+D G+ K+K YNPR GM++L V PVSRA+A+QRAGR+GRTGPG C+RL+TE +
Sbjct: 871 DGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLFTESAY 930
Query: 752 VSDLDDDAVPEIQRSNLASVVLALKALGINDLVGFDFMDPPPAESLLRALEELFALGALN 811
+++ + VPEIQR+NL +VVL LK+L + +L+ FDFMDPPP E++L ++ +L+ LGALN
Sbjct: 931 QNEMLPNPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQENILNSMYQLWVLGALN 990
Query: 812 SRGELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVH 871
+ G LT G +M EFPLDP L+K ++ E+ C +EV+TI +MLS +VF+RP+D+
Sbjct: 991 NVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVP-SVFFRPKDRAEE 1049
Query: 872 ADAARRAFHAGNAGDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALL 931
+DAAR F + DH+ LLNVY W + Y WC + F+ + +R+AR+VR QL +L
Sbjct: 1050 SDAAREKFFVPES-DHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDIL 1108
Query: 932 ERVEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQRDGSYRAVKSRQTVFVHPSSGV--A 989
+ ++I P +S + D VRKA+ + YF +AARL+ G Y ++ +HPSS +
Sbjct: 1109 KTLKI-PLTSC-HMEWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGL 1166
Query: 990 QAPPRWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYERKDVD 1034
P + +YHELVLTTKEYM+ VT + P+WL E+ P ++ K+ D
Sbjct: 1167 GYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKETD 1211
>Os01g0212100 ATP-dependent helicase, DEAH-box family protein
Length = 700
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 305/657 (46%), Positives = 440/657 (66%), Gaps = 29/657 (4%)
Query: 395 ATLQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKV 454
A+L+ +R+ LPVYK + +L ++ H IVVGETGSGK+TQIPQYL E G+ GGR +
Sbjct: 42 ASLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKSTQIPQYLKEAGWAEGGRL-I 100
Query: 455 ACTQPXXXXXXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSE-KTVIKYMTDGMLLREFLG 513
CTQP EE+GV+LG EVGY+IRFED T+ T+IK++TDG+L+RE +
Sbjct: 101 GCTQPRRLAVQSVASRVAEEVGVRLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMME 160
Query: 514 EPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFSDFF--- 570
+P L YSV++VDEAHER+++TD+L GL+K I R RPD++L+ISSAT+ A S FF
Sbjct: 161 DPLLTKYSVIMVDEAHERSISTDMLLGLLKKIQRRRPDLRLIISSATIEARSMSTFFNIR 220
Query: 571 ---------DAAP-----VFRIPGRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGG 616
D P + + G+ + V IHY P +DY+ AAV TVL +H EPPG
Sbjct: 221 RKNSMLESADHLPNPEPAILSVEGKGYTVEIHYVEEPVSDYLQAAVNTVLIIHEKEPPG- 279
Query: 617 GDILLFLTGQEEIETVEEILRHRLRVLGGKVAELVICPIYANLPAELQAKIFEPAPAGAR 676
DIL+FLTGQ++I+ ++L ++ G +L+I P+Y+ LP Q IF P G R
Sbjct: 280 -DILVFLTGQDDIDAAVKMLNEEIQHRGRHYLDLLILPLYSGLPRGDQDLIFTPTSKGKR 338
Query: 677 KVVLATNIAETSLTIDGIKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGR 736
KVV++TNIAETSLT++G+ YVVD GF K K YNP + +ESL+VAP+S+ASA QRAGR+GR
Sbjct: 339 KVVISTNIAETSLTLEGVVYVVDSGFSKQKCYNPISDIESLVVAPISKASARQRAGRAGR 398
Query: 737 TGPGECFRLYTEYNFVSDLDDDAVPEIQRSNLASVVLALKALGINDLVGFDFMDPPPAES 796
PG+CFRLYTE ++ ++ + +PE+QRSNL S + LKALGI++++GFD+ P E+
Sbjct: 399 VRPGKCFRLYTEEFYLKEMQPEGIPEMQRSNLVSCITQLKALGIDNILGFDWPASPSPEA 458
Query: 797 LLRALEELFALGALNSRGELT-KTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAML 855
++RALE L++LG L+ +LT G ++AE PLDPM+SK I+++ +GCS+E++TIAA L
Sbjct: 459 MIRALEVLYSLGILDEDAKLTVPLGFQVAEIPLDPMISKMILSANNFGCSDEILTIAAFL 518
Query: 856 SAGNAVFYRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAESGYSPQWCRESFVQHR 915
S +V+ R + D A+ F A GDHV LN+Y + +SG S QWC ++F+ H+
Sbjct: 519 SV-QSVWVSMRGVKKEFDEAKLRFAAAE-GDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQ 576
Query: 916 TMRRARDVRDQLGALLERVEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQ---RDGSYR 972
+++ D+R+QL +++R I P +S D++AVRKA+ AG F +A L+ ++G Y+
Sbjct: 577 ALKKVIDIREQLVRIIKRFGI-PLTSC-DRDMEAVRKAIIAGAFAYACHLEEYSQNGMYK 634
Query: 973 AVKSRQTVFVHPSSGVAQAPPRWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYE 1029
+++ Q V++HPSS + + P+W +Y LV T K YMR V ++P WL E APH+Y+
Sbjct: 635 TIRTSQEVYIHPSSVLFRVNPKWVIYQSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQ 691
>Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 536
Score = 599 bits (1544), Expect = e-171, Method: Compositional matrix adjust.
Identities = 281/509 (55%), Positives = 380/509 (74%), Gaps = 6/509 (1%)
Query: 524 VVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFSDFFDAAPVFRIPGRRF 583
++DEAHERT+ TD+LFGL+K + + R DM+L+++SATL+A+KFS +F +F IPGR F
Sbjct: 1 MLDEAHERTIHTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 60
Query: 584 EVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRVL 643
V I YT PE+DY+DAA++TVLQ+H+TEP GDILLFLTGQEEI+ + L R++ L
Sbjct: 61 PVEILYTKQPESDYLDAALITVLQIHLTEP--EGDILLFLTGQEEIDHACQCLYERMKGL 118
Query: 644 GGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFC 703
G V EL+I P+Y+ LP+E+Q+KIF+PAP G RKVV+ATNIAE SLTIDGI YVVDPGF
Sbjct: 119 GKDVPELIILPVYSALPSEMQSKIFDPAPPGKRKVVVATNIAEASLTIDGIYYVVDPGFA 178
Query: 704 KVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVPEI 763
K+ YN + G++SL++ P+S+ASA+QRAGR+GRTGPG+C+RLYTE + +++ +PEI
Sbjct: 179 KINVYNSKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEI 238
Query: 764 QRSNLASVVLALKALGINDLVGFDFMDPPPAESLLRALEELFALGALNSRGELTKTGRRM 823
QR NL S VL +KA+GINDL+ FDFMDPP ++L+ A+E+L++LGAL+ G LTK GR+M
Sbjct: 239 QRINLGSTVLNMKAMGINDLLSFDFMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKM 298
Query: 824 AEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAFHAGN 883
AEFPLDP LSK ++AS GCS+E++TI AM+ GN +FYRPR+K+ AD R F
Sbjct: 299 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQKRAKFFQPE 357
Query: 884 AGDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALLERVEIAPCSSAG 943
GDH+ LL VY AW +S WC E+FVQ R++RRA+DVR QL +++R ++ S+
Sbjct: 358 -GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSA-- 414
Query: 944 GGDLDAVRKAVTAGYFRHAARLQRDGSYRAVKSRQTVFVHPSSGVAQAPPRWALYHELVL 1003
G + +RKA+TAG+F HAAR YR + Q V++HPSS + Q P W +YHELV+
Sbjct: 415 GRNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVM 474
Query: 1004 TTKEYMRQVTELKPEWLVEIAPHYYERKD 1032
TTKEYMR+VT + P+WL E+AP +Y+ D
Sbjct: 475 TTKEYMREVTVIDPKWLTELAPRFYKSAD 503
>Os03g0314100 Helicase, C-terminal domain containing protein
Length = 564
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/465 (56%), Positives = 337/465 (72%), Gaps = 10/465 (2%)
Query: 399 DERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQ 458
++R+TLPV++ KDD L + +++ LI+VGETGSGKTTQIPQ++ E R VACTQ
Sbjct: 60 EKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQFVLE-AEGLSNRSMVACTQ 118
Query: 459 PXXXXXXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLG 518
P EEM V +G EVGYSIRFEDC+S KTV+KY+TDGMLLRE + +P L
Sbjct: 119 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLE 178
Query: 519 SYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFSDFFDAAPVFRI 578
Y V+V+DEAHERTLATD+LFGL+K++ + RPD+KL++ SATL A+KF +F AP+ ++
Sbjct: 179 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQTYFSGAPLMKV 238
Query: 579 PGRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRH 638
PGR V I YT PE DY++AA+ TV+Q+H+ EP GDIL+FLTG+EEIE +
Sbjct: 239 PGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP--AGDILVFLTGEEEIEDACRKINK 296
Query: 639 RLRVLGGKVAELVICPIYANLPAELQAKIFEPAPA-------GARKVVLATNIAETSLTI 691
+ +G +V + + P+Y+ LP +Q KIFEPAPA RK+V++TNIAETSLTI
Sbjct: 297 EINNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPAPSREGGPAGRKIVVSTNIAETSLTI 356
Query: 692 DGIKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNF 751
DGI YV+DPGF K K YNPR +ESLLV+P+S+ASA QRAGR+GRT PG+CFRLYTE +F
Sbjct: 357 DGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSF 416
Query: 752 VSDLDDDAVPEIQRSNLASVVLALKALGINDLVGFDFMDPPPAESLLRALEELFALGALN 811
DL PEI RSNLA+ VL LK LGI+DLV FDFMDPP E+L+RALE L LGAL+
Sbjct: 417 NDDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 476
Query: 812 SRGELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLS 856
G LT G M+EFPLDP +SK +V S +Y CS E+++I+AMLS
Sbjct: 477 DDGNLTPLGETMSEFPLDPQMSKMLVISPKYNCSNEILSISAMLS 521
>Os11g0310800 ATP-dependent helicase, DEAH-box family protein
Length = 708
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/643 (41%), Positives = 400/643 (62%), Gaps = 34/643 (5%)
Query: 404 LPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQPXXXX 463
LP+ + +D+++ A++ + V++V+GETGSGK+TQ+ Q LH GYT G +A TQP
Sbjct: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRG--AIAVTQPRRVA 72
Query: 464 XXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLGSYSVV 523
+E+ V LG EVGY+IRFED TSEKT IKY+TDG+LLRE L +P+L YSV+
Sbjct: 73 AVSVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVI 132
Query: 524 VVDEAHERTLATDILFGLVKDIARLR-PDMKLLISSATLNADKFSDFFDAAPVFRIPGRR 582
++DEAHER+L TDIL GL+K + + R D+K+LI+SATL+ K S FF PV IPG
Sbjct: 133 ILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTL 192
Query: 583 FEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRV 642
F V Y+ +YI++++ T + +HV E PG D+L+F+TG+++I+ + L R++
Sbjct: 193 FPVEKFYSTEHPTNYIESSLRTAIDIHVKESPG--DVLIFMTGKDDIDKMVSKLEERIQN 250
Query: 643 LG-GKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPG 701
L G + ++ P++ +LP E Q ++F PAP R+ ++ATN+AETSLT+DG+ +V+D G
Sbjct: 251 LEEGSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCG 310
Query: 702 FCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVP 761
+ K + YNP +GM SL V +SR A+QRAGR+GRT PG+C+RLY + + + +P
Sbjct: 311 YVKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIP 370
Query: 762 EIQRSNLASVVLALKALGIND--LVGFDFMDPPPAESLLRALEELFALGALNSRGELTKT 819
EIQRS+LA VL LK+L + D ++ FDF+DPP ESL AL +L+ + A++ G++T
Sbjct: 371 EIQRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDV 430
Query: 820 GRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAF 879
GR MAE PL+P LS+ ++ + GC + +T+AA+LSA F R K + R+
Sbjct: 431 GRIMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSA-EITFRSTRSKDMEGKRKRQEL 489
Query: 880 HAGNA-GDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALLERVEIAP 938
G+ GDH+ LL ++ +W +GY P+WC + +Q R M+ ++DVR+QL +++++
Sbjct: 490 PDGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKI---- 545
Query: 939 CSSAGGGDLDA------------VRKAVTAGYFRH-AARLQRDGSYRAVKSR-QTVFVHP 984
+ G D+ A +R+A+ GY A R+ Y V R Q V VHP
Sbjct: 546 --AKGSTDVQAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHP 603
Query: 985 SSGVA----QAPPRWALYHELVLTTKEYMRQVTELKPEWLVEI 1023
S + P + +YHEL+ TT+ +MR V+ + W+ I
Sbjct: 604 FSVLEGDEYGKLPVYVVYHELINTTRPFMRNVSAVDQSWVKPI 646
>Os06g0192500 ATP-dependent helicase, DEAH-box family protein
Length = 386
Score = 335 bits (859), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 238/360 (66%), Gaps = 34/360 (9%)
Query: 402 KTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQPXX 461
K+LP+ ++ L++ + ++ LIVVGETGSGKTTQ+PQ+L++ G+ G K + TQP
Sbjct: 29 KSLPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYDAGFCQDG-KVIGITQPRR 87
Query: 462 XXXXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLGSYS 521
EE +LG +VGYSIRF+D TS T IKYMTDG+LLRE L +P L YS
Sbjct: 88 VAAVTVAKRVAEECNDQLGKKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYS 147
Query: 522 VVVVDEAHERTLATDILFGLVKDI-----------ARLRPD------------------- 551
V+VVDEAHERT+ TD+L GL+K + ++ PD
Sbjct: 148 VIVVDEAHERTVHTDVLLGLLKKVQHSRSIYANKNGKILPDIQHQSQYFTLKACQGTKID 207
Query: 552 -MKLLISSATLNADKFSDFFDAAPVFRIPGRRFEVGIHYTVAPEADYIDAAVVTVLQLHV 610
+KL+I SA+L+A FSD+F +A I GR++ V I YT PE+DY+DA +VT+ Q+H+
Sbjct: 208 PLKLIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDILYTYQPESDYLDATLVTIFQIHL 267
Query: 611 TEPPGGGDILLFLTGQEEIETVEEILRHRLRVLGGKVAELVICPIYANLPAELQAKIFEP 670
E G GDIL FLTGQEEIE+++ +++ R R L + +++ PIY++LP+E Q F+P
Sbjct: 268 EE--GPGDILAFLTGQEEIESLDRLIQERARQLPPQRSKIWTTPIYSSLPSEQQMNAFKP 325
Query: 671 APAGARKVVLATNIAETSLTIDGIKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQR 730
APAG RKVVLATNIAETS+TI GIKYV+DPG K ++YNP TGMESL++ PVS+A A QR
Sbjct: 326 APAGTRKVVLATNIAETSVTIPGIKYVIDPGMVKARAYNPVTGMESLIIIPVSKAQALQR 385
>Os02g0736600 ATP-dependent helicase, DEAH-box family protein
Length = 1272
Score = 190 bits (482), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 214/447 (47%), Gaps = 71/447 (15%)
Query: 649 ELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFCKVKSY 708
+L + P+YA LPA Q ++F+ P G R VV+ATN+AETSLTI GIKYVVD G KVK+Y
Sbjct: 656 KLRVLPLYAMLPASQQLRVFQDIPDGERLVVVATNVAETSLTIPGIKYVVDTGKQKVKNY 715
Query: 709 NPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSD--LDDDAVPEIQRS 766
N TGM S + +S+ASA QR+GR+GRTGPG C+ LY+ + D + + PEI+
Sbjct: 716 NHATGMASYEIQWISKASASQRSGRAGRTGPGHCYHLYSAAAYGKDELFPEFSEPEIKNI 775
Query: 767 NLASVVLALKALGINDLVGFDFMDPPPAESLLRALEELFALGALNSRGELTKTGRRMAEF 826
+ VVL LK + IN + F F PP ESL+ A L L AL+S+GE T G+ MA++
Sbjct: 776 PVDGVVLMLKFMNINKVENFPFPTPPDKESLVEAERCLKVLEALDSKGEPTLMGKAMAQY 835
Query: 827 PLDPMLSK------AIVASERYGCSEEVITIAAMLSAGNAVFYRP--------------- 865
P+ P S+ I+ S+R I A +A F P
Sbjct: 836 PMSPRHSRLLLTIVKILNSQRCFSRPNFILGYAAAAASALSFTNPFLTQNEFSGESKQDN 895
Query: 866 ----------RDKRVHADAARRAFH---AGNAGDHVALLNVYNAWAESGYSPQWCRESFV 912
R ++ A R H + + D +++ + S ++CR + +
Sbjct: 896 PDSEDKDRQERKRQKKLKAMVREAHTKFSNPSSDALSISRALQLFELSENPVEFCRVNSL 955
Query: 913 QHRTMRRARDVRDQLGALL-----------------ERVEIAPCSSAGGGDL-----DAV 950
+TM +R QL L+ E VE A + + + +
Sbjct: 956 HLKTMEEMSKLRKQLLRLIFHHSKFCEEFSWKFGVSEDVEEAWRHESDKKPMQLNEEELL 1015
Query: 951 RKAVTAGYFRHAARLQR--------DGSYRAVKSRQ-----TVFVHPSSGVAQAPPRWAL 997
+ + AG+ A+ R D RAV + T+++H SS VA+ P + +
Sbjct: 1016 GQGICAGWADRVAKRIRAFPGPSKDDKKVRAVHYQSCAFNDTIYLHRSSSVARIAPEFVV 1075
Query: 998 YHELVLTTKEYMRQVTELKPEWLVEIA 1024
Y EL+ T + YM VT +KP W+++ A
Sbjct: 1076 YSELLHTKRSYMHGVTSVKPGWILKYA 1102
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 145/265 (54%), Gaps = 33/265 (12%)
Query: 397 LQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKK--- 453
++ R+ LP+ ++ ++++AI E+ V+I+ GETG GKTTQ+PQ+L+E G+ R
Sbjct: 233 VEKTRRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSNRSDRKG 292
Query: 454 -VACTQPXXXXXXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFL 512
+ TQP E+G+KLG EVG+ +R + K IK+MTDG+LLRE
Sbjct: 293 IIGITQPRRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILLREVQ 352
Query: 513 GEPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLR----------------------- 549
+ L YSV+++DEAHER+L TDIL G++ I ++R
Sbjct: 353 SDFLLKRYSVIILDEAHERSLNTDILIGMLSRIIKIRKSLYIEQQEKIRCGLSINPEDKI 412
Query: 550 PDMKLLISSATLNADKFSD---FFDA-APVFRIPGRRFEVGIHYTVAPEADYIDAAVVTV 605
+K+++ SATL F FD P ++P R+F V +H++ + DY+ A V
Sbjct: 413 SQLKVVLMSATLQLKDFISNRRLFDVIPPAIKVPVRQFPVTVHFSKSTHDDYLGQAYKKV 472
Query: 606 LQLHVTEPPGGGDILLFLTGQEEIE 630
+ +H P GG IL+F+TGQ E++
Sbjct: 473 MSIHKKLPQGG--ILVFVTGQREVD 495
>Os01g0767700 Similar to DEIH-box RNA/DNA helicase
Length = 1223
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 209/421 (49%), Gaps = 35/421 (8%)
Query: 590 TVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRVLGGKV-- 647
T+ PE +ID ++ L + G IL+FL G E+I E R+L
Sbjct: 556 TINPE--HIDTVLIERLLRKICVDSNEGAILVFLPGWEDINQTRE------RLLASPFFQ 607
Query: 648 --AELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFCKV 705
++ ++ +++ +P+ Q K+F+ PAG+RK++L+TNIAET++TID + +V+D G K
Sbjct: 608 DSSKFLVLSLHSMIPSSEQKKVFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKE 667
Query: 706 KSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVPEIQR 765
KSY+P + +L + VS+A+A QR GR+GR PG C+ LY+ + S L+ +PEI+R
Sbjct: 668 KSYDPYNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYSRFRAASLLEYQ-IPEIKR 726
Query: 766 SNLASVVLALKALGINDLVGFDF----MDPPPAESLLRALEELFALGALNSRGELTKTGR 821
+ + L +K L N + DF +DPP E++ A+ L LGAL +LT+ G
Sbjct: 727 MPIEELCLQVKLLDPNCRIA-DFLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGE 785
Query: 822 RMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPR--DKRVHADAARRAF 879
++ P+ P SK ++ C + +T+A + F P D+R A AA+
Sbjct: 786 KLGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDP-FLLPMAPDERKRAAAAKVEL 844
Query: 880 HA--GNAGDHVALLNVYNAW---AESGYSPQWCRESFVQHRTMRRARDVRDQLGALLERV 934
+ G D +A++ + W + G Q+C + FV TM ++R QL L +
Sbjct: 845 ASLYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQR 904
Query: 935 EIAP----CSSAGGGDLDAVRKAVTAGYFRHAARL--QRDGSYRAV---KSRQTVFVHPS 985
P S D +R + AG + RL R + RAV S V +HP
Sbjct: 905 GFVPVDASACSLNARDPGIIRAVLMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPH 964
Query: 986 S 986
S
Sbjct: 965 S 965
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 400 ERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQP 459
+R LP+ KD + ++ H+V+++ GETG GKTTQ+PQY+ + + G K+ CTQP
Sbjct: 202 DRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVCTQP 261
Query: 460 XXXXXXXXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLG------ 513
E G +G VGY IR E + + I + T+G+LLR +G
Sbjct: 262 RRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVTNIS 321
Query: 514 ---------EPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNAD 564
+ + + ++VDE HER +D + +++D+ L P ++L++ SAT++A+
Sbjct: 322 KEQNQKRSFDDAVTGITHIIVDEIHERDRFSDFMLAILRDLLPLYPHLRLVLMSATIDAE 381
Query: 565 KFSDFFDAAPVFRIPGRRFEVGIHY 589
+FS++F P ++PG V Y
Sbjct: 382 RFSNYFSGCPFIQVPGFTHPVKTFY 406
>Os04g0432300 Double-stranded RNA binding domain containing protein
Length = 1114
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 244/558 (43%), Gaps = 96/558 (17%)
Query: 401 RKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHE--VGYTAGGRKKVACTQ 458
R +LP+ + KD L+ + E+ V++V GETG GKTTQ+PQ++ + + GG + CTQ
Sbjct: 586 RASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESELGGYCSIVCTQ 645
Query: 459 PXXXXXXXXXXXXXEEM-----GVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLG 513
P E G K VGY +R + +E+T + + T G+LLR+ G
Sbjct: 646 PRRIAAISVAERVSSERCESSPGSK-DSLVGYQVRLDSARNERTKLLFCTTGILLRKLSG 704
Query: 514 EPDLGSYSVVVVDEAHERTL----ATDILFGLVKDIARLRPD-----MKLLISSATLNAD 564
DL + VVVDE HERT+ D F + + + R + +K+++ SAT+++
Sbjct: 705 NNDLSDVTHVVVDEVHERTILRKSMNDPDFPVFRSLVEKRSNQPGRKLKVILMSATVDSS 764
Query: 565 KFSDFFDAAPVFRIPGRRFEVGIHYT--VAPEADYIDA----AVVTVLQLH--------- 609
F+ +F PV + GR V H+ V + +Y A A Q H
Sbjct: 765 LFARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCLALDSPASGAYFQQHGEKWKNASS 824
Query: 610 -VTEPPGGGDILLFLTGQEEIETVEEILRH---------------RLRVLGGKVAELVIC 653
V G +++L G E + T + + H L+ L V +
Sbjct: 825 TVNNRRGKKNLVLSSWGDESVLTEDYVNPHYTTDCYQSYSERTNQNLKRLNEDVIDF--- 881
Query: 654 PIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFCKVKSYNPRTG 713
+L +L I E P GA V L +AE + ID + V G +S +
Sbjct: 882 ----DLLEDLICYIDENCPPGAVLVFLP-GVAEIDMLIDRLSASVRFG---RESSDWILP 933
Query: 714 MESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVPEIQRSNLASVVL 773
+ SLL AP + Q P E R VPE+ R L + L
Sbjct: 934 LHSLL-APTDQRKVFQ--------SPPENIR--------------KVPEMLRMPLTELCL 970
Query: 774 ALKALGINDLVGFDF--MDPPPAESLLRALEELFALGALNSRGELTKTGRRMAEFPLDPM 831
+K+L + + F ++PP E++ A++ L+ +GA EL+ G +A+ P+D +
Sbjct: 971 QIKSLHLGGIKSFLLKAIEPPKEEAISSAIDLLYQVGAFEGHEELSPLGYHLAKLPVDVL 1030
Query: 832 LSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAFHAGN-------- 883
+ K ++ +GC ++++AA LS + F P+D++ + + A+ + N
Sbjct: 1031 IGKMMLYGAIFGCLSPILSVAAFLSY-KSPFISPKDEKQNVEKAKASLMNENLDGSASTA 1089
Query: 884 ---AGDHVALLNVYNAWA 898
DH+ ++ YN W+
Sbjct: 1090 DNKQSDHLLMVIAYNKWS 1107
>Os03g0282700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 404
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/429 (32%), Positives = 200/429 (46%), Gaps = 55/429 (12%)
Query: 406 VYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQPXXXXXX 465
+Y +L+ +++H+V++V GSGK++ +P+ L E GY V C QP
Sbjct: 17 IYHQMPAILEYLEDHRVVVVSAAPGSGKSSVLPRCLAESGY-----GPVLCAQPRHLAAF 71
Query: 466 XXXXXXXEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGE-PDLGSYSVVV 524
EE + I++ T LL F P L Y VV
Sbjct: 72 VAMAKVGEEW--------------------DSDIEFTTTRQLLDRFSSPAPVLAGYGAVV 111
Query: 525 VDEAHERTLATDILFGLVKDIARLRPDM----KLLISSATLNAD-KFSDFFDAAPVFRIP 579
+DEAH+RTL TD+L G+VK M K+++ +A AD S FF APV IP
Sbjct: 112 IDEAHDRTLGTDVLLGMVKAALATGTTMGGRCKVVVCTAGGPADGMLSAFFGGAPVVSIP 171
Query: 580 GRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHR 639
+V + Y+ P D A V +H ++PPG D+L FL +I V
Sbjct: 172 RAAHQVEVRYSRGPVLDMAAAVADEVAAIHASQPPG--DVLAFLPENADIIGVHA----- 224
Query: 640 LRVLGGKVAELVICPIYANLPAELQ--AKIFEPAPAGARKVVLATNIAETSLTIDGIKYV 697
R+LG V L + ++ NLPAEL I P P G R+VVLAT++AET++ + GI YV
Sbjct: 225 -RLLGLPVPGLAVRYVHDNLPAELIDIMLINSPVPDGRRRVVLATDVAETAVLVHGITYV 283
Query: 698 VDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDD 757
VD G V P +S+ +A RA +G +GPG C RLY + DLD+
Sbjct: 284 VDTGL--VSEQPPVR---------ISKEAAAARAAIAGFSGPGRCHRLYQPEEY-DDLDE 331
Query: 758 DAVPEIQRSNLA-SVVLALKALGINDLVGFDFMDPPPAESLLR-ALEELFALGALNSRGE 815
+P I++ A L +K + + GF+ DP ++L+ +L G L+ G
Sbjct: 332 HTIPHIRQDGAAVRFALMVKRHAADGIPGFEIFDPALEPAVLKNVFGQLVNGGYLDKLGN 391
Query: 816 LTKTGRRMA 824
L+ G R A
Sbjct: 392 LSDKGEREA 400
>Os01g0315300
Length = 243
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 71/99 (71%), Gaps = 17/99 (17%)
Query: 637 RHRLRVLGGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKY 696
R +L+ GKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIA+
Sbjct: 18 REKLQRANGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIADAET------- 70
Query: 697 VVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSG 735
YNPRT MES LVAPVSRASAEQRA RSG
Sbjct: 71 ----------PYNPRTAMESFLVAPVSRASAEQRACRSG 99
>Os11g0196100
Length = 333
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 134/299 (44%), Gaps = 83/299 (27%)
Query: 415 KAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQPXXXXXXXXXXXXXEE 474
K + H V++V G+GK++QIP+ LH G+
Sbjct: 4 KYVALHLVVLVDAGPGTGKSSQIPRLLHAAGH---------------------------- 35
Query: 475 MGVKLGHEVGYSIRFEDCTSEK-TVIKYMTDGMLLREFLGEPDLGSYSVVVVDEAHERTL 533
G VGYS+ +D +S+ TV+KY+T G LLR+ +P L Y VVVD+AH+
Sbjct: 36 -----GCVVGYSVPLDDRSSDADTVVKYITHGALLRDLAADPLLTRYGAVVVDDAHDGMA 90
Query: 534 ATDILFGLVKDIARLRPDMKLLIS---SATLNADKFSDFFDAAPV------FRIPGRRFE 584
T ++ VK A R D+++++ +TL FF + + FR +
Sbjct: 91 ITGVVLSCVKAAAARRLDLRVVVCLNHYSTLCKGVVHGFFSGSGMDGKELWFRTYSGLID 150
Query: 585 VGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRVLG 644
HY P DY+ AAV V ++H TEPP GD+L+FL G ++E E L
Sbjct: 151 Q--HYLPEPVTDYLGAAVDAVCRIHTTEPP--GDLLVFLPGCTDVEAAEHALN------- 199
Query: 645 GKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPGFC 703
G RKVVLAT++A S+ +DGIKY+VD G+C
Sbjct: 200 -----------------------------GLRKVVLATDVAVCSVFVDGIKYIVDSGYC 229
>Os01g0118100 Similar to Maleless protein
Length = 164
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 497 TVIKYMTDGMLLREFLGEPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLI 556
T + + T G+LLR L + +L + V+VDE HER + D L ++KD+ RP+++L++
Sbjct: 6 TRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVL 65
Query: 557 SSATLNADKFSDFFDAAPVFRIPGRRFEV 585
SATLNA+ FS +F AP+ IPG + V
Sbjct: 66 MSATLNAELFSSYFGGAPMIHIPGFTYPV 94
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,857,883
Number of extensions: 1311654
Number of successful extensions: 3912
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 3856
Number of HSP's successfully gapped: 18
Length of query: 1070
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 959
Effective length of database: 11,240,047
Effective search space: 10779205073
Effective search space used: 10779205073
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)