BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0139200 Os05g0139200|AK108058
(399 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0139200 Cyclin-like F-box domain containing protein 780 0.0
Os05g0139300 Cyclin-like F-box domain containing protein 291 7e-79
Os07g0535100 Cyclin-like F-box domain containing protein 249 2e-66
Os07g0535200 Cyclin-like F-box domain containing protein 248 8e-66
Os07g0535300 Cyclin-like F-box domain containing protein 224 1e-58
Os05g0172500 Cyclin-like F-box domain containing protein 207 8e-54
Os05g0175960 Cyclin-like F-box domain containing protein 197 9e-51
Os05g0177400 Cyclin-like F-box domain containing protein 191 7e-49
Os05g0177000 Cyclin-like F-box domain containing protein 186 3e-47
Os07g0535700 Galactose oxidase, central domain containing p... 179 3e-45
Os05g0172100 Galactose oxidase, central domain containing p... 169 5e-42
Os01g0380800 Cyclin-like F-box domain containing protein 111 8e-25
Os08g0529400 Cyclin-like F-box domain containing protein 107 2e-23
Os01g0379400 Cyclin-like F-box domain containing protein 102 6e-22
Os01g0381601 99 7e-21
Os05g0177100 Conserved hypothetical protein 80 4e-15
Os05g0172400 75 8e-14
>Os05g0139200 Cyclin-like F-box domain containing protein
Length = 399
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/399 (94%), Positives = 379/399 (94%)
Query: 1 MAMELERATKKRCGGIDGDNPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRD 60
MAMELERATKKRCGGIDGDNPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRD
Sbjct: 1 MAMELERATKKRCGGIDGDNPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRD 60
Query: 61 HRKKLPHTLAGFISHYSVPLHDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTI 120
HRKKLPHTLAGFISHYSVPLHDGIVLIPHFDSI HRLVPDPSLSFLPGYRTI
Sbjct: 61 HRKKLPHTLAGFISHYSVPLHDGIVLIPHFDSIDGGEEDEEEHRLVPDPSLSFLPGYRTI 120
Query: 121 FPKDXXXXXXXXXXXKNSPRDESDYVVCNPATQRWIILPEIDRADPVSTVRLGFDPALSP 180
FPKD KNSPRDESDYVVCNPATQRWIILPEIDRADPVSTVRLGFDPALSP
Sbjct: 121 FPKDCCNGLLLCLCCKNSPRDESDYVVCNPATQRWIILPEIDRADPVSTVRLGFDPALSP 180
Query: 181 YFHVFAILEHVDGCVSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFIS 240
YFHVFAILEHVDGCVSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFIS
Sbjct: 181 YFHVFAILEHVDGCVSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFIS 240
Query: 241 YNSAIIAVDTEGKKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVW 300
YNSAIIAVDTEGKKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVW
Sbjct: 241 YNSAIIAVDTEGKKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVW 300
Query: 301 TLDDYCSCGWSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSY 360
TLDDYCSCGWSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSY
Sbjct: 301 TLDDYCSCGWSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSY 360
Query: 361 DMDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESLPDHA 399
DMDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESLPDHA
Sbjct: 361 DMDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESLPDHA 399
>Os05g0139300 Cyclin-like F-box domain containing protein
Length = 309
Score = 291 bits (744), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 163/208 (78%), Gaps = 7/208 (3%)
Query: 1 MAMELERATKKRCGGIDGDNPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRD 60
MAMELERATKKR GGID DL DDLIV+ILSRLPAKSVCRFKCVSWRWRRLISHRD
Sbjct: 1 MAMELERATKKRRGGID------DLPDDLIVDILSRLPAKSVCRFKCVSWRWRRLISHRD 54
Query: 61 HRKKLPHTLAGFISHYSVPLHDG-IVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRT 119
HRKKLPHTL+GFIS Y PL+D +V IPHFDSI HRLVPDPSLSFL GY +
Sbjct: 55 HRKKLPHTLSGFISRYYGPLNDDELVSIPHFDSIDGGEEDEEEHRLVPDPSLSFLLGYMS 114
Query: 120 IFPKDXXXXXXXXXXXKNSPRDESDYVVCNPATQRWIILPEIDRADPVSTVRLGFDPALS 179
I PKD KNSPRDESDYVVCNPATQRWIILPEID D ++++RL FDPALS
Sbjct: 115 ISPKDCCNGLLLCLCCKNSPRDESDYVVCNPATQRWIILPEIDDYDQLASIRLCFDPALS 174
Query: 180 PYFHVFAILEHVDGCVSGVEIFSLETGA 207
PYFHVFAILE DGC++GVEIFS ETG
Sbjct: 175 PYFHVFAILEDADGCITGVEIFSSETGG 202
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 80/90 (88%), Positives = 87/90 (96%)
Query: 310 WSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMDRGKVNS 369
WSFKYNISTSQLFGWTNM+LER+Y+LIAIHP+CNMIFYV RDEGQNTLLSYDMDRG++NS
Sbjct: 220 WSFKYNISTSQLFGWTNMRLERKYNLIAIHPDCNMIFYVSRDEGQNTLLSYDMDRGEINS 279
Query: 370 ICNMRDPFWKTWDPCLPYVPVFMESLPDHA 399
ICN+RDPFW WDPCLPYVPVFMESLPDHA
Sbjct: 280 ICNIRDPFWNPWDPCLPYVPVFMESLPDHA 309
>Os07g0535100 Cyclin-like F-box domain containing protein
Length = 377
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 213/385 (55%), Gaps = 26/385 (6%)
Query: 20 NPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVP 79
NPAA LTDDL+VEIL RLP +SVCRFK V WR LI+ R+HRKKLP TL+GF + S
Sbjct: 10 NPAASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLPQTLSGFF-YKSSS 68
Query: 80 LHDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKNSP 139
HF ++ PS SFLP T+ P D + P
Sbjct: 69 GERCPCSAHHFTNVSGKGVPLIY------PSFSFLPQCDTVVPLDCCNGLLLCRCFQPGP 122
Query: 140 RDESD------YVVCNPATQRWIILPEIDRADPVSTVR-LGFDPALSPYFHVFAILEHVD 192
+ D Y VCNPAT+ W++LP+ D A+ + + L FDPA+S +FHV +E
Sbjct: 123 NNSDDEIEPFHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISSHFHVLEYVEAEY 182
Query: 193 GCVSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAVDTEG 252
V+GVEI+S ETG W+ +GWGD+ + +S F++G ++ + + I VD EG
Sbjct: 183 EDVTGVEIYSSETGLWTLHVSGWGDDVFLRHWANPRSVFLNGFLHSATCAAEIAVVDMEG 242
Query: 253 KKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWSF 312
KKW+TI E G I Q+QG L N D LS+W L+DY + W
Sbjct: 243 KKWRTIAMPE-------PEGDTGIIHQTQGRLCAFNVDPDDIFKLSIWILEDYDTDNWIL 295
Query: 313 KYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMDRGKVNSICN 372
K+ +S+ +LFG + +Y +IA+HPECN+IF+V+ TL++Y+MDR +V +I N
Sbjct: 296 KHTVSSLRLFGGMKYRFGFDYQIIAVHPECNLIFFVY--GWDKTLMAYEMDRKEVRAIRN 353
Query: 373 MRDPFWKTWDPCLPYVPVFMESLPD 397
+ +++P LPYVP+F ESL D
Sbjct: 354 LGH---DSFEPYLPYVPLFNESLAD 375
>Os07g0535200 Cyclin-like F-box domain containing protein
Length = 377
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 210/385 (54%), Gaps = 26/385 (6%)
Query: 20 NPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVP 79
NPAA LTDDL+VEIL RLP +SVCRFK V WR LI+ R+HRKKLP TL+GF + S+
Sbjct: 10 NPAASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLPQTLSGFF-YKSIS 68
Query: 80 LHDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKNSP 139
HF ++ PS SFLP T+ P D + P
Sbjct: 69 GERCPCSAHHFTNVSGKGVPLIY------PSFSFLPQCDTVVPLDCCNGLLLCRCFQPGP 122
Query: 140 RDESD------YVVCNPATQRWIILPEIDRADPVSTVR-LGFDPALSPYFHVFAILEHVD 192
+ D Y VCNPAT+ W++LP+ D A+ + + L FDPA+S +FHV +E
Sbjct: 123 NNSDDEIEPFHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISSHFHVLEYVEAEY 182
Query: 193 GCVSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAVDTEG 252
V+GVEI+S ETG W+ +GWGD+ + +S F++G ++ + + I VD EG
Sbjct: 183 EDVTGVEIYSSETGLWTLHVSGWGDDVFLRHWANPRSVFLNGFLHSATCAAEIAVVDMEG 242
Query: 253 KKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWSF 312
KKW+TI E G I Q+QG L N D LS+W L+DY + W
Sbjct: 243 KKWRTIAMPE-------PEGDTGIIHQTQGRLCAFNVDPDDIFKLSIWILEDYDTDNWIL 295
Query: 313 KYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMDRGKVNSICN 372
K+ +S+ +LFG + +Y +I +HPECN+IF+V+ TL++Y+MDR +V I N
Sbjct: 296 KHTVSSLRLFGGKKYQFGFDYQIIVVHPECNLIFFVY--GWDKTLMAYEMDRKEVRVIRN 353
Query: 373 MRDPFWKTWDPCLPYVPVFMESLPD 397
+ + DP LPYVP+F ES D
Sbjct: 354 LGH---DSSDPYLPYVPLFYESFAD 375
>Os07g0535300 Cyclin-like F-box domain containing protein
Length = 437
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 204/375 (54%), Gaps = 24/375 (6%)
Query: 23 ADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVPLHD 82
A T DL+V+IL RLP +SVCR K V WR LI+ DHRKKLP TL+GF Y+ +
Sbjct: 80 ASPTIDLVVDILRRLPVRSVCRSKGVCPYWRDLIADHDHRKKLPQTLSGFF--YTSFSEE 137
Query: 83 GIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKNSPRDE 142
HF ++ + P+ +FLP + + P D + +
Sbjct: 138 RSAAEHHFTNVTGIGMP------LISPTFAFLPQCKEVIPLDSCNGLLLCRCLQFDGVSK 191
Query: 143 SDYVVCNPATQRWIILPEIDRADPVSTVR-LGFDPALSPYFHVFAILEHVDGCVSGVEIF 201
Y VCNPAT+ W++LP+ + AD + + L FDPA+S +FHV +E CV+GVEI
Sbjct: 192 FHYAVCNPATEEWVMLPDANWADGENRIACLCFDPAISSHFHVVEYVEDEAECVTGVEIN 251
Query: 202 SLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAVDTEGKKWKTIPFL 261
S +TG WS NGW ++ + +S F++G ++ ++ I+AVD EGKKW+ IP
Sbjct: 252 SSKTGLWSVHVNGWNGVVLVSLSVNRRSVFLNGFLHSVTPADEIVAVDMEGKKWRKIPVP 311
Query: 262 EEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWSFKYNISTSQL 321
+ + + I Q+QG L N D LS+W L+DY + W K+ +S+ L
Sbjct: 312 DR-------DNDIGIIHQTQGCLSAFNVDLLDIFKLSIWFLEDYDTNNWILKHTVSSLDL 364
Query: 322 FGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMDRGKVNSICNMRDPFWKTW 381
F N +L+ EY +IA+HP+CN+IF+V+ + NTL++Y+MDR +V I N+
Sbjct: 365 FEGKNYRLDFEYQVIAVHPDCNLIFFVYGLD--NTLMAYEMDRKEVRVIRNLGH------ 416
Query: 382 DPCLPYVPVFMESLP 396
D C PY+P + S P
Sbjct: 417 DYCWPYLPYELRSSP 431
>Os05g0172500 Cyclin-like F-box domain containing protein
Length = 382
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 213/386 (55%), Gaps = 25/386 (6%)
Query: 20 NPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVP 79
NPAA+LTDDLIVEILSRLPAKSV R + V RWRRLIS HRKKLP TLAGF H SV
Sbjct: 16 NPAAELTDDLIVEILSRLPAKSVRRCRRVCRRWRRLISDPHHRKKLPQTLAGFF-HLSVN 74
Query: 80 LHDGIVLIPHFDSIXXXXXXXXXHRLVPD--PSLSFLPGYRTIFPKDXXXXXXXXXXXKN 137
V HF ++ +P PS SFLP + I D ++
Sbjct: 75 ESRFPVEARHFVNVSGIGGR------LPHVCPSFSFLPRFERISMVDSCGGLLLCQCFES 128
Query: 138 SPRDESDYVVCNPATQRWIILPE--IDRADPVSTVRLGFDPALSPYFHVFAILEHVDGCV 195
S D YVV NP T+ WI+LPE D RLGFDP +S FHVF + D V
Sbjct: 129 S--DAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVPCDD--V 184
Query: 196 SGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAVDTEGKKW 255
+GV+I+S ET W++RE+ W D + +SAF +GM++ +SY +I++VD EG+ W
Sbjct: 185 TGVKIYSSETREWNYRESEWC--TDTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGRTW 242
Query: 256 KTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWSFKYN 315
+T + E + + + I QS+G LYY++ + LS+W L+DY W+ K++
Sbjct: 243 RTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLKHS 302
Query: 316 ISTSQLFGWTNMKLE-REYSLIAI-HPECNMIFYVFRDEGQNTLLSYDMDRGKVNSICNM 373
++ L+ N K + E+ + I H +CN+I+Y+ RD TL++YDMD + I +
Sbjct: 303 VTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRD---YTLMAYDMDHKESRVIQAL 359
Query: 374 RDPFWKTWDPCLPYVPVFMESLPDHA 399
CLPYVP++ E+L + +
Sbjct: 360 GS---DCILECLPYVPLYAETLSNRS 382
>Os05g0175960 Cyclin-like F-box domain containing protein
Length = 381
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 201/396 (50%), Gaps = 48/396 (12%)
Query: 21 PAAD-LTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPH-----TLAGFIS 74
PAA+ LTDDL+VE+LSR+P KS+CR K V RWRR+IS DHR+ LP + GF
Sbjct: 13 PAAEKLTDDLLVEVLSRVPYKSLCRSKRVCRRWRRVISDPDHRRLLPRYHLHDAVVGFFD 72
Query: 75 HYSVPLHDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXX 134
H S G R V PSL FLP + D
Sbjct: 73 HRSFISFSG------------------RGRFV-GPSLPFLPDCGDLRLLDICNGLLLCRR 113
Query: 135 XKNSPRDESDYVVCNPATQRWIILPEIDRADPVSTVRLGFDPAL-SPYFHV--FAILEHV 191
+ S DY+V NPAT++WI+LPE RLGFDPA+ S +FHV F ++EH
Sbjct: 114 RRLSDPRRFDYLVANPATEQWIVLPESGWTHKEQIARLGFDPAVSSSHFHVFEFELVEHS 173
Query: 192 --------DGCVSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNS 243
DG V VEI+S ETG W HR NGWG +S F GM++ I+ +
Sbjct: 174 AMGMSGDHDGNVVAVEIYSSETGVWIHRNNGWGCII--RTLDIWRSVFFKGMLHLITMDD 231
Query: 244 AIIAVDTEGKKWKTIPFLEEMT--CECISNGILAFIGQSQGHLYYINFRDWDSSILSVWT 301
+ VD EG W+TIP E + +G FI SQ L ++N D LSVW
Sbjct: 232 VVAVVDVEGNSWRTIPMPETFVDPYYGVDDG---FIDVSQDCLCFVNTDRDDLYKLSVWV 288
Query: 302 LDDYCSCGWSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYD 361
L+DY S W+ K+ +S LFG + +++IHP+ N+IF V ++G +SY+
Sbjct: 289 LEDYSSDQWTLKHTVSHLHLFGTDKQHFGYDDKVVSIHPKRNIIFLVSLNDG--IFISYE 346
Query: 362 MDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESLPD 397
MD +V+ IC + D + + LPYVP++ ESL +
Sbjct: 347 MDSREVHYICELGDILTRHY---LPYVPLYSESLAN 379
>Os05g0177400 Cyclin-like F-box domain containing protein
Length = 351
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 166/319 (52%), Gaps = 35/319 (10%)
Query: 21 PAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVPL 80
PA LTDDL+VEILSR+P KS+CR KCVS RWRR+ISH DHR LP G
Sbjct: 17 PAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLG--------- 67
Query: 81 HDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKNSPR 140
D IV + D+ R DPSL FLP + D + +
Sbjct: 68 -DAIVGFFYSDTFTNVTGEG---RPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLADP 123
Query: 141 DESDYVVCNPATQRWIILPEIDRADPVSTVRLGFDPAL-SPYFHVFAILEHVDGC----- 194
DY+V NPAT++W+ILP+ +D V T RLGFDP + S +FHVF +E DG
Sbjct: 124 RRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVE--DGAGDADG 181
Query: 195 -----------VSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNS 243
V GVEI+S TG WSH++NGW E + + S F DG+++ I+
Sbjct: 182 NVDDDDDFDGHVKGVEIYSSVTGEWSHKDNGWDWEI--RIRDEWNSVFFDGVLHLITLEY 239
Query: 244 AIIAVDTEGKKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLD 303
+ AVD EG W+TIP + + E FIG SQG LY++N + +SVW L+
Sbjct: 240 VVAAVDVEGNAWRTIPMPQSLV-EPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLE 298
Query: 304 DYCSCGWSFKYNISTSQLF 322
DY S W +K+ +S LF
Sbjct: 299 DYSSEQWIWKHTVSHLHLF 317
>Os05g0177000 Cyclin-like F-box domain containing protein
Length = 424
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 201/405 (49%), Gaps = 46/405 (11%)
Query: 22 AADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLP----HTLAGFI-SHY 76
A +LTDDL+VEILSR+P KS+CR KCVS RWRR+ISH DHR++LP LAGF+ + Y
Sbjct: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLYADY 94
Query: 77 SVPLHDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXK 136
V + ++P D DPS SFLP + D
Sbjct: 95 RV--LNRFQIVPALDPPPLI-----------DPSFSFLPKCDDLQLVDSCNGLLLCRCWN 141
Query: 137 NSPRDES-DYVVCNPATQRWIILPEIDRADPVSTVRLGFDPALSPYFHVFAILEHVDGC- 194
+ +YVVC+P +++++ P+ + V LGFDPA+S +FHVF ++E D
Sbjct: 142 QLNEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPF-LGFDPAVSSHFHVFEVVEDWDYYD 200
Query: 195 -------------VSGVEIFSLETGAWSHR-ENGWGD--EDDHTVHPDAKSAFVDGMVNF 238
V G+ I+S ETG WS +NGW + +KS F +GM++
Sbjct: 201 CDDDDLECDGVEDVVGLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHL 260
Query: 239 ISYNSAIIAVDTEGKKWKTIPFL-EEMTCEC-----ISNGILAFIGQSQGHLYYINFRDW 292
++ + VD EGK W+TIP ++ + C ++G FI S+ L++ + +
Sbjct: 261 VAIQPVVAVVDVEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSY 320
Query: 293 DSSILSVWTLDDYCSCGWSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDE 352
+SVW LDDY W+ ++ +ST + F T + + E +F++F D
Sbjct: 321 GDWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFMFYDY 380
Query: 353 GQNTLLSYDMDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESLPD 397
L SY+MD G+V + R P LPY+P+F+ESL D
Sbjct: 381 VHCILTSYEMDSGEVRCLSRPRS---YCEPPYLPYIPLFLESLAD 422
>Os07g0535700 Galactose oxidase, central domain containing protein
Length = 335
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 181/352 (51%), Gaps = 30/352 (8%)
Query: 56 ISHRDHRKKLPHTLAGFISHYSVPLHDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLP 115
I+ +HRKKLP TL+GF + S+ + HF + P+ SFLP
Sbjct: 1 IADHEHRKKLPQTLSGFF-YKSIDYERCPHMARHFTNATGRGMPLVC------PTFSFLP 53
Query: 116 GYRTIFPKDXXXXXXXXXXXKNSPRDESDYVVCNPATQRWIILPEIDRA-DPVSTVRLGF 174
+ D + + Y VCNPAT ++LP+ + A D T L F
Sbjct: 54 QCHHVVILDSCNGLLLCRCHVSRETLQFQYAVCNPATGECVMLPDANWAIDENRTACLCF 113
Query: 175 DPALSPYFHVFAILEHVD---------GCVSGVEIFSLETGAWSHRENGWGDEDDHTVHP 225
DPA+S +FHV +E + V+GV I+S +TG WS NGW DE ++
Sbjct: 114 DPAISSHFHVLEYVEDEEYVEDEDEYDALVTGVVIYSSKTGLWSLHVNGWDDEVMVSLPV 173
Query: 226 DAKSAFVDGMVNFISYNSAIIAVDTEGKKWKTIPFLEEMTCECISNGILAFIGQSQGHLY 285
D F++G ++ ++ I+AVD EGKKW+ IP + +G + I Q+QG L
Sbjct: 174 DRTRVFLNGFLHSVT-TCDIVAVDMEGKKWRKIPMPD-------PDGDIGIIHQTQGRLC 225
Query: 286 YINFRDWDSSILSVWTLDDYCSCGWSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMI 345
N D LS+W L+DY + W K+ +S+ LFG +L+ +Y +IA+HPECN+I
Sbjct: 226 AFNVDPNDILELSIWFLEDYDTDNWILKHTVSSINLFGRKKYQLDFDYQVIAVHPECNLI 285
Query: 346 FYVFRDEGQNTLLSYDMDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESLPD 397
F+V+ NTL++Y+MDR +V I R ++ P LPYVP+F ESLPD
Sbjct: 286 FFVY--GWHNTLMAYEMDRKEVRVI---RKLGHESCLPYLPYVPMFSESLPD 332
>Os05g0172100 Galactose oxidase, central domain containing protein
Length = 389
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 197/403 (48%), Gaps = 33/403 (8%)
Query: 6 ERATKKRCGGIDGDNPAADLTDDLIVEILSRLPAKSVCRFKCV----SWRWRRLISHRDH 61
+++ K+ G NPAA+LTDDLIV+ILSRLPA + + R
Sbjct: 3 KKSKLKKEGSSTTRNPAAELTDDLIVDILSRLPASRSADASAYPGGGAASSPTPTTARSS 62
Query: 62 RKKLPHTLAGFISHYSVPLHDGIVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIF 121
K P + ++++ P L HF ++ R + P++SFLP +
Sbjct: 63 PKPSPASSTAARTNHAAP-----KLARHFVNVTGRG------RPLICPTISFLPRFDLEG 111
Query: 122 PKDXXXXXXXXXXXKNSPRDESDYVVCNPATQRWIILPEID-RADPVSTVRLGFDPALSP 180
+ DE Y+VCNP+T+ W+ P+ + LGFDPA+S
Sbjct: 112 MRMVDCCGGLLLFRCFMSSDEFCYLVCNPSTEEWVAFPDSGYNPEWQFFTHLGFDPAVSS 171
Query: 181 YFHVFAILEHVDGCVSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFIS 240
+FHVF + G V GVEI+S ETG W+ E+ W D T D F +GM++ +
Sbjct: 172 HFHVFEFVMGDCGFVEGVEIYSSETGLWNFMESEW---DPETTVYDRTRTFFNGMLHLVE 228
Query: 241 YNSAIIAVDTEGKKWKTI--PFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILS 298
AI++VD EG+ W++I P E E + + FIGQSQG L Y++ D LS
Sbjct: 229 EGIAILSVDVEGEIWQSIGAPRPELENVEDMFALVSCFIGQSQGKLCYLSAYDTVPWNLS 288
Query: 299 VWTLDDYCSCGWSFKYNISTSQLFGWTNMKLERE------YSLIAIHPECNMIFYVFRDE 352
+W L+DY W+ K+ ++T QL N K + + Y ++A+H ECN+I+Y+
Sbjct: 289 IWVLEDYSKDEWTLKHKLTTEQLSEKINCKCKTDFDKAWYYHVVAVHSECNLIYYI---A 345
Query: 353 GQNTLLSYDMDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESL 395
G +TL+SYDM + I N+ + LPYVP++ E L
Sbjct: 346 GGDTLMSYDMGHKQSCVIENLGPGNNSGY---LPYVPLYSEIL 385
>Os01g0380800 Cyclin-like F-box domain containing protein
Length = 391
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 151/366 (41%), Gaps = 39/366 (10%)
Query: 25 LTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVPLHDGI 84
L DDL +++LSRLP KS CR KC W S+ + KLP L GF+ S
Sbjct: 14 LPDDLTLDVLSRLPYKSFCRAKCTCTGWLSFSSNPHYCDKLPKPLTGFLYQKS------- 66
Query: 85 VLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKN-SPRDES 143
DS D SLSFLP Y + D +N S +
Sbjct: 67 ------DSSAIEVASLCPDDRSFDTSLSFLPRYEWLELTDSCNGLVLCKYGRNTSSPSVA 120
Query: 144 DYVVCNPATQRWIILPE--IDRADPVSTVRLGFDPALSPYFHVFAILEHVD-----GCVS 196
++VVCNPAT++W+ LPE ++ +L FDP+ SPYF+VF E + C+S
Sbjct: 121 NFVVCNPATRQWMELPETLLEPEGHSYATKLAFDPSWSPYFYVFNFEEKRNPVERWACIS 180
Query: 197 GVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAV-----DTE 251
V IFS W ++ W E + + D + + G F+ +S + V +TE
Sbjct: 181 KVAIFSSRNSTW-FMDDKW--EPSNQISVDCQPHVLLGGKLFLQTSSCRVLVIDAFHNTE 237
Query: 252 GKKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWS 311
+ + + ++G G L+Y+ D L VW D Y W+
Sbjct: 238 QPSHWIFDLPGYKPTSPMVDCLTGYLGHKSGVLHYVQ-PDTGGRTLLVWARDGYPHGDWN 296
Query: 312 FKYNISTSQLFGWT-------NMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMDR 364
K+ +S S FG + L Y + ++ E ++F LLSY +
Sbjct: 297 LKHRLSMSDAFGQDIFLDEHFDGFLSCHYDIQSLDLERGLVFLCHF--AAERLLSYSLST 354
Query: 365 GKVNSI 370
GK+ I
Sbjct: 355 GKLTKI 360
>Os08g0529400 Cyclin-like F-box domain containing protein
Length = 369
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 150/356 (42%), Gaps = 36/356 (10%)
Query: 24 DLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVPLHDG 83
+ DDL+VEILSRLP KS+ RFKCVS WR LIS D R++LP AG
Sbjct: 2 EFCDDLLVEILSRLPFKSLARFKCVSRSWRALISGGDLRRRLPLLAAGLFVGDGGGGEPR 61
Query: 84 IVLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKNSPRDES 143
D + +SF P T ++ +
Sbjct: 62 YATACSGDGVEFC-------------DMSFFPLAET--AARVVDACEGLLLYRSLAAASA 106
Query: 144 DYVVCNPATQRWIILPEIDRADPVSTVRLGFDPA----LSPYFHVFAILEHVDGCVSGVE 199
YV C PAT+RW LP R + L FDPA SP +HV + + + V+
Sbjct: 107 MYVAC-PATRRWAALPVPRREAQLPL--LAFDPADGGGGSPRYHVVCFVAWQERGAT-VD 162
Query: 200 IFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAVDTEGKKWKTIP 259
+FS ETGAW+ R+ +G + ++ P + + G+++ ++Y ++ +D T
Sbjct: 163 VFSSETGAWAERDAAFGGVEASSLSP--TTHYRGGVLHVLAYPDRVVLMDLAATTTTTTS 220
Query: 260 FLEEMTCECISNGI--LAFIGQSQGHLYYINFRDWDSSILSVWTLD----DYCSCGWSFK 313
+ + + A +G S+G L+Y D L VW LD SC W
Sbjct: 221 VAPGRLAPRLPDDVDAGARLGHSRGRLHYAKC---DGERLRVWALDVDAASPGSCQWILT 277
Query: 314 YNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMDRGKVNS 369
+ +++ + E +A HP+ + Y+ EG+ + S DM R ++ S
Sbjct: 278 NTVCVNEMTINGGLWAASEVKFLAFHPDMADVVYLSSPEGK--VASCDMRRKEMVS 331
>Os01g0379400 Cyclin-like F-box domain containing protein
Length = 433
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 168/385 (43%), Gaps = 56/385 (14%)
Query: 25 LTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVPLHDGI 84
LTDDL+V+ILSRLP KSVC FKCV W L S + KLP AG + S I
Sbjct: 63 LTDDLVVDILSRLPLKSVCCFKCVCKSWASLFSDQYFCTKLPRRPAGLLYQDSNNSSIQI 122
Query: 85 VLIPHFDSIXXXXXXXXXHRLVPDPSLSFLPGYRTIFPKD-XXXXXXXXXXXKNSPRDES 143
+P +S SLSF+P + + D K+ D S
Sbjct: 123 AKLPSGNSEI-------------GTSLSFMPHHENLKLVDCSNGLILFTHGSKSDSPDSS 169
Query: 144 DYVVCNPATQRWIILPE----IDRADPVSTVRLGFDPALSPYFHVFAILEHVDG-----C 194
++VCNPATQ WI LP+ ++ +D ++ L F+P+ S +F VF +
Sbjct: 170 HFIVCNPATQEWIALPDTCPRVNGSDYIAM--LAFNPSSSCHFFVFNFQKRRSPHSGVFV 227
Query: 195 VSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAVDTEG-- 252
++ VEIFS E W ++ + E P + G++ + ++ A++T
Sbjct: 228 ITEVEIFSSEDFTWI-ADDAFETEIMMISMPH---VLLHGVLYLRTVEHSVFAIETPHMY 283
Query: 253 KKWKTIPFLEEMTCEC-ISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWS 311
K W E C ++N I +G+S G L+Y+ ++D L+VW L+ WS
Sbjct: 284 KPWIHRWTFELPGDSCPMNNYIWGCLGESSGILHYMQ-PNYDGCWLNVWRLESRHQ-QWS 341
Query: 312 FKYNISTSQLFGWTNM--------KLEREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMD 363
+++S FG + +Y +++ E ++F D + +LSY +
Sbjct: 342 MTHSLSMIDAFGRGTLVHGDPFSVDWSADYGMLSFDLEREIVF--LHDRVSSKVLSYSIR 399
Query: 364 RGKVNSICNMRD---------PFWK 379
GK +C M D P+W+
Sbjct: 400 TGK---LCEMGDLPRNSLYYVPYWR 421
>Os01g0381601
Length = 377
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 103 HRLVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKNSPRDESDYVVCNPATQRWIILPEID 162
H LVP+PSLSFL YR IFPKD KN RDESDYVV NPATQRWIILP+ID
Sbjct: 302 HCLVPNPSLSFLSRYRAIFPKDCCNGLILCVY-KNYTRDESDYVVYNPATQRWIILPKID 360
Query: 163 RADPVSTVRLGFDPAL 178
R +PVSTVR FDPAL
Sbjct: 361 RVNPVSTVRFSFDPAL 376
>Os05g0177100 Conserved hypothetical protein
Length = 135
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 271 NGI-LAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWSFKYNISTSQLFGWTNMKL 329
NGI FI SQG LY++N +SVW L+DY S W +K+ +S LF +
Sbjct: 10 NGIGEGFIVLSQGSLYFVNSDHDKPYKVSVWVLEDYSSEQWIWKHTVSHLHLFQTKRLLF 69
Query: 330 EREYSLIAIHPECNMIFYVFRDEGQNTLLSYDMDRGKVNSICNMRDPFWKTWDPCLPYVP 389
+Y +++IHPE N IF V+ L+SY++D +V+ IC + W + LPYVP
Sbjct: 70 GHDYKVVSIHPERNNIFLVWPH--SKMLMSYELDSREVHFICGIGGCEWVMY--YLPYVP 125
Query: 390 VFMESLPD 397
+++ESL D
Sbjct: 126 LYLESLAD 133
>Os05g0172400
Length = 282
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 49 SWRWRRLISHRDHRKKLPHTLAGFISHYS----VPLHDGIVLIPHFDSIXXXXXXXXXHR 104
S RWR LIS DHRKKLP TLAGF H P+ HF ++ R
Sbjct: 33 SRRWRGLISDPDHRKKLPQTLAGFFYHSENESRFPME-----ARHFVNVSGRG------R 81
Query: 105 LVPDPSLSFLPGYRTIFPKDXXXXXXXXXXXKNSPRDESDYVVCNPATQRWIILPEIDR- 163
+ PS SFLP + +I D ++S D S YVVCNPAT+ + LPE
Sbjct: 82 PLVYPSFSFLPRFESIRMVDSCGGLLLCRCFESS--DASRYVVCNPATEELVALPESSYD 139
Query: 164 ----ADPVSTVRLGFDPALSPYFHVFAIL 188
+ RLGFDP +S FHVF +
Sbjct: 140 AEGGGEEEMCARLGFDPDVSSQFHVFQFV 168
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,644,611
Number of extensions: 605409
Number of successful extensions: 1876
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 1815
Number of HSP's successfully gapped: 18
Length of query: 399
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 296
Effective length of database: 11,657,759
Effective search space: 3450696664
Effective search space used: 3450696664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)