BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0286500 Os04g0286500|AK064584
(417 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0286500 Homeodomain-like containing protein 602 e-172
Os02g0466700 465 e-131
Os06g0534700 248 7e-66
Os11g0514200 245 6e-65
Os07g0575300 231 1e-60
Os08g0225900 227 1e-59
Os08g0561000 223 2e-58
Os10g0410300 Homeodomain-like containing protein 216 3e-56
Os10g0342200 183 2e-46
Os09g0424900 154 1e-37
Os11g0282700 Homeodomain-like containing protein 100 2e-21
Os06g0521000 Homeodomain-like containing protein 93 4e-19
Os01g0527800 89 5e-18
Os10g0449100 87 2e-17
Os09g0241700 Homeodomain-like containing protein 84 2e-16
Os01g0821200 82 7e-16
Os01g0385600 Homeodomain-like containing protein 75 7e-14
Os06g0716600 74 3e-13
Os01g0373400 Homeodomain-like containing protein 69 6e-12
Os08g0178900 Homeodomain-like containing protein 66 4e-11
Os10g0563100 65 7e-11
Os01g0549300 Homeodomain-like containing protein 65 7e-11
>Os04g0286500 Homeodomain-like containing protein
Length = 417
Score = 602 bits (1552), Expect = e-172, Method: Compositional matrix adjust.
Identities = 302/417 (72%), Positives = 302/417 (72%)
Query: 1 MDPSKRGFMNLLNQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPPNFQTFNPFG 60
MDPSKRGFMNLLNQG ASPPNFQTFNPFG
Sbjct: 1 MDPSKRGFMNLLNQGSPSQQSSQNSPPTQFPSTFSQSQFPQSPHFTQASPPNFQTFNPFG 60
Query: 61 PPANYHLYGSSPPNFQGFLQQASWLQSAPISFQGFRPQESWMHSPNQVVXXXXXXXXXXX 120
PPANYHLYGSSPPNFQGFLQQASWLQSAPISFQGFRPQESWMHSPNQVV
Sbjct: 61 PPANYHLYGSSPPNFQGFLQQASWLQSAPISFQGFRPQESWMHSPNQVVGSASSHGSKSA 120
Query: 121 XQCPARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKK 180
QCPARQEENNLVNIEESSDNSQETGRRGTHVNWT DSINGNDKK
Sbjct: 121 SQCPARQEENNLVNIEESSDNSQETGRRGTHVNWTEEENLRLLSSWLNNSLDSINGNDKK 180
Query: 181 GEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDD 240
GEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDD
Sbjct: 181 GEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDD 240
Query: 241 MIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYXXXXX 300
MIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAY
Sbjct: 241 MIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYTSSSN 300
Query: 301 XXXXXXXXXXXXXXXGQXXXXXXXXXXXXXXXXXXXXDQPSQDFVLFNEAVKLRAEAVLX 360
GQ DQPSQDFVLFNEAVKLRAEAVL
Sbjct: 301 QETEEETSRKEKRPEGQKKAKAKLKGKGKKPAPSPLGDQPSQDFVLFNEAVKLRAEAVLK 360
Query: 361 XXXXXXXXXXXXXXQTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE 417
QTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE
Sbjct: 361 SAEATTKSAEAKKEQTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE 417
>Os02g0466700
Length = 686
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/376 (61%), Positives = 256/376 (68%), Gaps = 6/376 (1%)
Query: 48 ASPPNFQTFNPFGPPANYHLYGSSPPNFQGFLQQASWLQSAPISFQGFRPQESWMHSPNQ 107
+S P FQ F+PFG P NY YG+S P+F GF QQA WL S P+SFQGFRP E+W++SPNQ
Sbjct: 311 SSTPTFQNFHPFGAPNNYQPYGNSTPSFHGFQQQAHWLHSTPVSFQGFRPPENWVYSPNQ 370
Query: 108 VVXXXXXXXXXXXXQCPARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXX 167
+ QCPAR EENN+V+IEESSDNSQE GRRGT VNWT
Sbjct: 371 ITGSASSHGSESASQCPARYEENNVVDIEESSDNSQEAGRRGTRVNWTEEENIRLLSSWL 430
Query: 168 XXXXDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYS 227
D INGNDKK EYYW+ VA EFN N S +NRKRTVVQCKTHWGGVKK+I KFCGAYS
Sbjct: 431 NNSVDPINGNDKKAEYYWKAVAVEFNSNTSRSNRKRTVVQCKTHWGGVKKEIGKFCGAYS 490
Query: 228 RARRTWSSGFSDDMIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRT 287
RAR T+SSG+SDDMIMEKAH ++KSENN+K FTLEYMWRELKDQPKWRR+LEEDSKNKRT
Sbjct: 491 RARSTFSSGYSDDMIMEKAHIMFKSENNEKPFTLEYMWRELKDQPKWRRVLEEDSKNKRT 550
Query: 288 KISESGAYXXXXXXXXXXXXXXXXXXX------XGQXXXXXXXXXXXXXXXXXXXXDQPS 341
KISESGAY GQ DQP
Sbjct: 551 KISESGAYTSSSNQDTEEENRRKKENRRKKKRPEGQKKAKAKLKGRGKNVAPSPLGDQPC 610
Query: 342 QDFVLFNEAVKLRAEAVLXXXXXXXXXXXXXXXQTRMEKYQTYLKLLDKDTANFSDAKLK 401
QDFVL+NEA+K++AEA+L TRMEKYQTYLKLLDKDT+NFSDAKLK
Sbjct: 611 QDFVLYNEAIKVKAEAMLKSAEATSKSAEAKKEYTRMEKYQTYLKLLDKDTSNFSDAKLK 670
Query: 402 RHEAVLEKLATELAEE 417
RHEAVLEKLATELAEE
Sbjct: 671 RHEAVLEKLATELAEE 686
>Os06g0534700
Length = 409
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 183/369 (49%), Gaps = 30/369 (8%)
Query: 1 MDPSKRGFMNLLNQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPPNFQTFNPFG 60
M+P K F NLLNQG P Q F+PFG
Sbjct: 1 MEPFKGNFSNLLNQGSSSQATNSEAQNSLSTQFPTSYPQNFR-------PSFLQNFHPFG 53
Query: 61 PPANYHLYGSSPPNFQGFLQQASWLQSAPISFQGFRPQESWMHSPNQ------------- 107
PP+NY Y PP FQG QQ + Q P S +GF+ QE+ +HS NQ
Sbjct: 54 PPSNYQPY-RHPPIFQGAQQQEYYGQPTPGSLEGFQLQENLVHSSNQAFGFAANRSQFGM 112
Query: 108 -----VVXXXXXXXXXXXXQCPARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXX 162
+ C R E +V +EE+SD+S+E GRRGT +NWT
Sbjct: 113 QYSTSIRATANTSSHGSASPCHTRHNEKEVVEVEEASDSSEE-GRRGTRINWTEDDNIRL 171
Query: 163 XXXXXXXXXDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKF 222
D I GNDKK E YW+ VA EFN N SN KR QC+THW VK+D+ KF
Sbjct: 172 MSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKF 231
Query: 223 CGAYSRARRTWSSGFSDDMIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDS 282
CG YS+AR T++SG+SDDMIMEKA YK NN K FTLEYMW++LKDQPKWRR+LEE S
Sbjct: 232 CGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQKPFTLEYMWKDLKDQPKWRRVLEESS 291
Query: 283 KNKRTKISESGAYXXXXXXXXXXXXXXXXXXXXGQXXXXXXXXXXXXXXXXXXXXDQPSQ 342
NKR+KISESGAY GQ D+PSQ
Sbjct: 292 HNKRSKISESGAYTSSSNQDTEEETERKEKRPEGQ---KAAKQRQKGKGAPSPLGDKPSQ 348
Query: 343 DFVLFNEAV 351
+ VLF+EA+
Sbjct: 349 NMVLFHEAI 357
>Os11g0514200
Length = 409
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 182/369 (49%), Gaps = 30/369 (8%)
Query: 1 MDPSKRGFMNLLNQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPPNFQTFNPFG 60
M+P K F NLLNQG P Q F+PFG
Sbjct: 1 MEPFKGNFSNLLNQGSSSQATNSDAQNSPSTQFPTSYPQNFR-------PSFLQNFHPFG 53
Query: 61 PPANYHLYGSSPPNFQGFLQQASWLQSAPISFQGFRPQESWMHSPNQ------------- 107
PP+NY Y PP FQG QQ + Q P S +GF+ QE+ +HS NQ
Sbjct: 54 PPSNYQPY-RHPPIFQGAQQQDYYGQPTPGSLEGFQLQENLVHSSNQAFGFAANRSQFGM 112
Query: 108 -----VVXXXXXXXXXXXXQCPARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXX 162
+ C R E +V +EE+SD+S+E GRRGT +NWT
Sbjct: 113 QYSTSIGAAANTSSHGSASPCHTRHNEKEVVEVEEASDSSEE-GRRGTRINWTEDDNIRL 171
Query: 163 XXXXXXXXXDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKF 222
D I GNDKK E YW+ VA EFN N SN KR QC+THW VK+D+ KF
Sbjct: 172 MSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKF 231
Query: 223 CGAYSRARRTWSSGFSDDMIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDS 282
CG YS+AR T++SG+SDDMIMEKA YK NN K FTLEYMW++LKDQPKWRR+LEE S
Sbjct: 232 CGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQKPFTLEYMWKDLKDQPKWRRVLEESS 291
Query: 283 KNKRTKISESGAYXXXXXXXXXXXXXXXXXXXXGQXXXXXXXXXXXXXXXXXXXXDQPSQ 342
NKR KISESGAY GQ D+P+Q
Sbjct: 292 HNKRNKISESGAYTSSSNQDTEEETERKEKRPEGQ---KAAKQRQKGKGAPSPLGDKPNQ 348
Query: 343 DFVLFNEAV 351
+ VLF+EA+
Sbjct: 349 NMVLFHEAI 357
>Os07g0575300
Length = 361
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/253 (50%), Positives = 152/253 (60%), Gaps = 10/253 (3%)
Query: 172 DSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARR 231
D I GNDKK E YW+ VA EFN N SN KR QC+THW VK+D+ KFCG YS+AR
Sbjct: 112 DPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKART 171
Query: 232 TWSSGFSDDMIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISE 291
T++SG+SDDMIMEKA YK NN K FTLEYMW++LKDQPKWRR+LEE S NKR KISE
Sbjct: 172 TFTSGYSDDMIMEKACEWYKKHNNQKPFTLEYMWKDLKDQPKWRRVLEESSHNKRNKISE 231
Query: 292 SGAYXXXXXXXXXXXXXXXXXXXXGQXXXXXXXXXXXXXXXXXXXXDQPSQDFVLFNEAV 351
SGAY GQ D+PSQ+ VLF+EA+
Sbjct: 232 SGAYTSSSNQDTEEETERKEKRPEGQ---KAAKQRQKGKGAPSPLGDKPSQNMVLFHEAI 288
Query: 352 KLRAEAVLXX-------XXXXXXXXXXXXXQTRMEKYQTYLKLLDKDTANFSDAKLKRHE 404
+A A+L + R EKYQ YLKL++KDT+ FS+AKLKRHE
Sbjct: 289 TTKAAALLKAAEATLIGAEAKKEKAIAKKEKARAEKYQMYLKLMEKDTSTFSEAKLKRHE 348
Query: 405 AVLEKLATELAEE 417
VL++LA ELAEE
Sbjct: 349 NVLDQLARELAEE 361
>Os08g0225900
Length = 175
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 120/175 (68%)
Query: 243 MEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYXXXXXXX 302
MEKAHALYKSENNDKTFTLEYMWRELKDQPKW+RILEEDSKNKRTKISESGAY
Sbjct: 1 MEKAHALYKSENNDKTFTLEYMWRELKDQPKWQRILEEDSKNKRTKISESGAYTSSSNQE 60
Query: 303 XXXXXXXXXXXXXGQXXXXXXXXXXXXXXXXXXXXDQPSQDFVLFNEAVKLRAEAVLXXX 362
GQ DQPSQDFVLFNEAVKLRAEAVL
Sbjct: 61 TEEETSRKEKRPEGQKKAKAKLKGKGKKPAPSPLGDQPSQDFVLFNEAVKLRAEAVLKSA 120
Query: 363 XXXXXXXXXXXXQTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE 417
QTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE
Sbjct: 121 EATTKSAEAKKEQTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE 175
>Os08g0561000
Length = 175
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 118/175 (67%)
Query: 243 MEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYXXXXXXX 302
MEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAY
Sbjct: 1 MEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYTSSSNQE 60
Query: 303 XXXXXXXXXXXXXGQXXXXXXXXXXXXXXXXXXXXDQPSQDFVLFNEAVKLRAEAVLXXX 362
GQ DQPSQDFVL NEAVKLRAEAVL
Sbjct: 61 TEEETSRKEKRPEGQKKAKVKLKGKGKKHAPSPLGDQPSQDFVLLNEAVKLRAEAVLKST 120
Query: 363 XXXXXXXXXXXXQTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE 417
QTRMEKYQTYLKLLDKDTANF+D KLKRHEA+LEKLATELAEE
Sbjct: 121 EATTKSAEAKKEQTRMEKYQTYLKLLDKDTANFNDVKLKRHEAILEKLATELAEE 175
>Os10g0410300 Homeodomain-like containing protein
Length = 293
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 150/270 (55%), Gaps = 30/270 (11%)
Query: 148 RGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQ 207
R T +NWT D + G D+K E+YW+ VA FN +A +N KR+V Q
Sbjct: 54 RRTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQ 113
Query: 208 CKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKSENNDKTFTLEYMWRE 267
KTHWG VK+DI KFCG Y R + TW SG SDDM+M AHA+++ EN DK FTLEYMWRE
Sbjct: 114 LKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWRE 173
Query: 268 LKDQPKWRRILEEDSKNKRTKISESGAYXXXXXXXXXXXXXXXXXXXXGQXXXXXXXXXX 327
+KD PKW RI++EDS NKRTK GQ
Sbjct: 174 VKDLPKWCRIVQEDSGNKRTK----------------EETISKEKRPDGQKKAKAGLKGK 217
Query: 328 XXXXXXXXXXDQPSQDFVLFNEAVKLRAEAVLXXXXXXXXXXXXXXXQTRMEKYQTYLKL 387
+QPSQ+ +L++EA+ L+A A++ + +KYQTYLKL
Sbjct: 218 GKDAAPSPLGNQPSQNMILYHEAMSLKATAMI--------------KSAKEKKYQTYLKL 263
Query: 388 LDKDTANFSDAKLKRHEAVLEKLATELAEE 417
L+KDT+NFS+A KRHE VL++LA ELA E
Sbjct: 264 LEKDTSNFSEAHHKRHEGVLDQLAKELAGE 293
>Os10g0342200
Length = 333
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 115/210 (54%), Gaps = 3/210 (1%)
Query: 1 MDPSKRGFMNLLNQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ASPPNFQTFN 57
MDPS R F NLLNQG + NF F+
Sbjct: 1 MDPSNRVFTNLLNQGSPSQYSGNSSQNSPPTQFPSTFTQSQYPQSPQFPQSQALNFHNFH 60
Query: 58 PFGPPANYHLYGSSPPNFQGFLQQASWLQSAPISFQGFRPQESWMHSPNQVVXXXXXXXX 117
PFGPPANY LYG+ PP+F GF QQ +WL+SA +SFQGFR QESWMHSPNQV
Sbjct: 61 PFGPPANYQLYGNPPPSFHGFQQQGNWLKSAALSFQGFRHQESWMHSPNQVGGSASSHGS 120
Query: 118 XXXXQCPARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGN 177
CPA + ++VNIEESS N++E GR+GT VNWT D I+ N
Sbjct: 121 ESTSPCPATSQAKSVVNIEESSGNNEEAGRKGTWVNWTEEENLRLLSSWLNNSVDPIDSN 180
Query: 178 DKKGEYYWRDVAAEFNGNASSNNRKRTVVQ 207
DKK EYYWR VAAE+N N N+RKRTVV+
Sbjct: 181 DKKSEYYWRAVAAEYNNNTRRNDRKRTVVK 210
>Os09g0424900
Length = 149
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
Query: 198 SNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKSENNDK 257
SN KRT QC+THW VK+D+ KFCG Y++AR T++SG+SD+MIMEKA YKS NNDK
Sbjct: 3 SNGNKRTAKQCRTHWDNVKRDVTKFCGFYAKARNTFTSGYSDEMIMEKAREWYKSRNNDK 62
Query: 258 TFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYXXXXXXXXXXXXXXXXXXXXGQ 317
FTLEYMW++LKDQPKWRR+LE+ SKNKR KISESGAY GQ
Sbjct: 63 PFTLEYMWKDLKDQPKWRRVLEQSSKNKRNKISESGAYTSSSNQDTEKESVSKEKRPEGQ 122
Query: 318 XXXXXXXXXXXXXXXXXXXXDQPSQDFVL 346
D+PSQ+ +L
Sbjct: 123 ---KAAKQRQKGKCEPSPLGDKPSQNMIL 148
>Os11g0282700 Homeodomain-like containing protein
Length = 514
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 17/224 (7%)
Query: 70 SSPPN-FQGFLQQASWLQ----SAPISFQGFRPQESWMHSPNQVVXXXXXXXXXXXXQCP 124
S PP F + Q S LQ S P+++ + W SP + P
Sbjct: 100 SRPPGGFLSYFQDPSSLQNHQPSIPLNYYATQQAAPWAPSPAEY-------RSPVTKSGP 152
Query: 125 ARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYY 184
Q N+ +S T R + WT DSINGN KK + Y
Sbjct: 153 GEQHPINI----DSGGEETPTVRTEKRLTWTHEEDIRLVSAWLNNLNDSINGNFKKNDCY 208
Query: 185 WRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIME 244
W DV +N + + NR R Q K + +KK++ +FC AY + + SG ++ +ME
Sbjct: 209 WGDVTTAYN-STTPRNRMRQEKQIKDRFHKIKKNVGRFCCAYKEVKSIYVSGQNELQLME 267
Query: 245 KAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTK 288
K HA Y+++ + FT + W+ L+DQPKW LEE K +TK
Sbjct: 268 KVHATYEADYKEGQFTFLHCWKALRDQPKWHAYLEELEKPNKTK 311
>Os06g0521000 Homeodomain-like containing protein
Length = 291
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 133 VNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYYWRDVAAEF 192
VNI+ S D T R + W+ DSI+GN KK + YW DV AE+
Sbjct: 135 VNID-SGDEEAHTVRTEKRLTWSTEEDIRLVSAWLNNSNDSISGNFKKNDRYWGDVTAEY 193
Query: 193 NGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKS 252
N + + NR R Q K + +KK++ +FC Y + + SG +D + EKA A Y++
Sbjct: 194 N-STTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVSGQNDMQLREKAEAAYQA 252
Query: 253 ENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISE 291
+ + F+ + W L+DQPKW LEE K + K+ +
Sbjct: 253 DYKEGPFSFLHCWNILRDQPKWHSYLEELEKPNKPKMDD 291
>Os01g0527800
Length = 484
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 133 VNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYYWRDVAAEF 192
VNI+ S D R + W+ DSI+GN KK + YW DV AE+
Sbjct: 135 VNID-SGDEEAPNVRTEKRLTWSTEEDIRLVSAWLNNSNDSISGNFKKNDCYWGDVTAEY 193
Query: 193 NGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKS 252
N + + NR R Q K + +KK++ +FC Y + + +G +D + EKA A Y++
Sbjct: 194 N-STTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVNGQNDMQLREKAEAAYQA 252
Query: 253 ENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISE 291
+ + F+ + W L+DQPKW LEE K + K+ +
Sbjct: 253 DYKEGPFSFLHCWNILRDQPKWHAYLEELEKPNKPKMDD 291
>Os10g0449100
Length = 424
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 125 ARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYY 184
+R + ++N+++ D R + W D INGN KK E Y
Sbjct: 124 SRSKAKPVINLDDGDDV-----RTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESY 178
Query: 185 WRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIME 244
W DV +N + + NRKR V K W +K+ + FC ++ +A ++SG+SDD + +
Sbjct: 179 WGDVVELYN-STTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRD 237
Query: 245 KAHALYKSEN-NDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISE 291
A+ Y + N+ FT+ + W+ L+D+PKW +LEE K + + +
Sbjct: 238 FANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDD 285
>Os09g0241700 Homeodomain-like containing protein
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 172 DSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARR 231
D I N KK + YW DVAA +N + NR R V Q K +G ++K + FC ++
Sbjct: 74 DPIESNFKKNDKYWGDVAAAYNS-TTPKNRARLVKQVKDRFGKIRKKVGNFCCSWKEVNS 132
Query: 232 TWSSGFSDDMIMEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEE-DSKNKR 286
++SG S++ +M KA +Y+++ D F + W ELK QPKW LE+ D NKR
Sbjct: 133 LYASGESNEDLMNKAQKIYENDFKDGPFLFMHCWNELKKQPKWHAYLEQLDKSNKR 188
>Os01g0821200
Length = 356
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 172 DSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARR 231
D INGN KK E Y DV +N N + NRKR V K W +K+ + FC ++ +A
Sbjct: 113 DPINGNGKKNESYRGDVVELYN-NTTPINRKREVKHLKDQWQRIKRWVGFFCASWKKAAL 171
Query: 232 TWSSGFSDDMIMEKAHALYKSEN-NDKTFTLEYMWRELKDQPKWRRILEEDSK 283
++SG+SDD + + A+ Y ++ N+ FT+ + W+ L D+PKW +LEE K
Sbjct: 172 VYTSGYSDDQLRDFANQFYVNDYPNEGPFTVLHYWKVLHDEPKWHAVLEELEK 224
>Os01g0385600 Homeodomain-like containing protein
Length = 211
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 133 VNIEESSD-NSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYYWRDVAAE 191
+N+E ++ NS T +R + W+ D I N KK + YW DVAA
Sbjct: 57 INVENGNNGNSTRTEKR---LGWSTEEDLRLVSAWLNNSNDPIESNFKKNDKYWADVAAA 113
Query: 192 FNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYK 251
+N S+ R R V Q K + +KK + FC ++ A ++SG + +M KA +Y+
Sbjct: 114 YNSTTPSS-RFRQVKQVKDRFSKIKKKVGNFCCSWKEANSLYASGECNVDLMAKAQKIYE 172
Query: 252 SENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRT 287
++ D F L W ELK QPK L++ K RT
Sbjct: 173 NDFKDGPFLLTQCWNELKTQPKCHAYLDQLDKLTRT 208
>Os06g0716600
Length = 542
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 123 CPARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGE 182
P +N VN+ D+ ET R + WT DS G D+K E
Sbjct: 117 TPISARDNTYVNV----DSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDSTVGADRKNE 172
Query: 183 YYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMI 242
YW DV A +N + ++R+R Q K + V K F A+ +AR ++SG++D M
Sbjct: 173 QYWTDVEATYN-ETTPSHRRRNAKQIKDRFHKVNKWTDLFHSAWLKARMIYTSGYNDQMW 231
Query: 243 MEKAHALYKSEN---NDKTFTLEYMWRELKDQPKW 274
+EKAH Y +N N F L +W +K + KW
Sbjct: 232 IEKAHVFYIKDNEKLNLGPFVLMEVWNTVKTEAKW 266
>Os01g0373400 Homeodomain-like containing protein
Length = 376
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 7/170 (4%)
Query: 124 PARQEENNLVNIEESSDNSQETGRRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEY 183
P Q N E + ++ R + WT D G DK G
Sbjct: 141 PLNQAHNGSSPPEVEILHGNDSVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQ 200
Query: 184 YWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIM 243
YW +V +N + R+R QCK W + K F AY++ARR ++SG+S +M +
Sbjct: 201 YWGEVVETYN-KTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWL 259
Query: 244 EKAHALYKSENND-----KTFTLEYMWRELKDQPKWRRILEEDSKNKRTK 288
+ AH Y +N + + L +W+ +D PKW + E+ KN R +
Sbjct: 260 DAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKW-KTYNENLKNARKR 308
>Os08g0178900 Homeodomain-like containing protein
Length = 389
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Query: 147 RRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVV 206
R + WT DS G DK G YW +V +N + RKR +
Sbjct: 93 RTEKRILWTEEEDIRLMSAWIEHSTDSTCGADKGGGQYWGEVVESYN-KTTPPLRKRNLK 151
Query: 207 QCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKSENNDKT---FTLEY 263
QCK W + + F AY +ARR ++SG+S+ M ++ AH Y +N + F L
Sbjct: 152 QCKDRWHKINRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKLGPFVLME 211
Query: 264 MWRELKDQPKWRRILEEDSKNKRTKIS 290
+W+ ++ KW + E+ +N R + S
Sbjct: 212 VWKICREVSKW-KTYNENMRNARKRKS 237
>Os10g0563100
Length = 390
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 200 NRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKSE-NNDKT 258
NRKR V K W +K+ + FC ++ +A ++SG+SDD + + A+ Y + N+
Sbjct: 153 NRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGP 212
Query: 259 FTLEYMWRELKDQPKWRRILEEDSKNKRTKISE 291
FT+ + W+ L+D+PKW +LEE K + + +
Sbjct: 213 FTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDD 245
>Os01g0549300 Homeodomain-like containing protein
Length = 389
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 147 RRGTHVNWTXXXXXXXXXXXXXXXXDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVV 206
R + WT DS G DK G YW +V +N + RKR +
Sbjct: 93 RTEKRILWTEEEDIILMSAWIEHSTDSTCGADKGGGQYWGEVVESYN-KTTPPLRKRNLK 151
Query: 207 QCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKSENNDKT---FTLEY 263
QCK W + + F AY +ARR ++SG+S+ M ++ AH Y +N + F L
Sbjct: 152 QCKDRWHKINRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKLGPFVLME 211
Query: 264 MWRELKDQPKWR 275
+W+ ++ KW+
Sbjct: 212 VWKICREVSKWK 223
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.129 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,811,177
Number of extensions: 374023
Number of successful extensions: 700
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 667
Number of HSP's successfully gapped: 28
Length of query: 417
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 314
Effective length of database: 11,657,759
Effective search space: 3660536326
Effective search space used: 3660536326
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 157 (65.1 bits)