BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0195100 Os04g0195100|AK107201
(382 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0195100 Cyclin-like F-box domain containing protein 749 0.0
Os10g0124500 Cyclin-like F-box domain containing protein 197 1e-50
Os04g0193300 Cyclin-like F-box domain containing protein 192 2e-49
Os04g0191800 Cyclin-like F-box domain containing protein 182 5e-46
Os04g0194000 Cyclin-like F-box domain containing protein 180 1e-45
Os10g0391200 Cyclin-like F-box domain containing protein 180 2e-45
Os12g0128000 Cyclin-like F-box domain containing protein 171 8e-43
Os02g0543200 Cyclin-like F-box domain containing protein 143 2e-34
Os11g0131300 140 2e-33
Os04g0191600 F-box associated type 1 domain containing protein 100 2e-21
Os07g0269800 Cyclin-like F-box domain containing protein 80 2e-15
Os07g0268000 Cyclin-like F-box domain containing protein 78 9e-15
Os10g0396100 Cyclin-like F-box domain containing protein 76 4e-14
>Os04g0195100 Cyclin-like F-box domain containing protein
Length = 382
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/382 (96%), Positives = 369/382 (96%)
Query: 1 MAKRARLLSAAAGPVLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQ 60
MAKRARLLSAAAGPVLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQ
Sbjct: 1 MAKRARLLSAAAGPVLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQ 60
Query: 61 PPRPLVFGCARWRSGXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIHSSCDGL 120
PPRPLVFGCARWRSG LIRHPAERRRVLGFSDYRQHQSFKIHSSCDGL
Sbjct: 61 PPRPLVFGCARWRSGAAADADAAVDSVDLIRHPAERRRVLGFSDYRQHQSFKIHSSCDGL 120
Query: 121 LLFVSGRAFYICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKYPDAVCILA 180
LLFVSGRAFYICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKYPDAVCILA
Sbjct: 121 LLFVSGRAFYICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKYPDAVCILA 180
Query: 181 VGSSEKPRRIGLPEAFLPPVFWIDEIGFLPPVLLHGCLHWHLRKPEDAILVFDTVAESFR 240
VGSSEKPRRIGLPEAFLPPVFWIDEIGFLPPVLLHGCLHWHLRKPEDAILVFDTVAESFR
Sbjct: 181 VGSSEKPRRIGLPEAFLPPVFWIDEIGFLPPVLLHGCLHWHLRKPEDAILVFDTVAESFR 240
Query: 241 WMVSPNVDGYGAHLVEIDGGMLGIGIVTQGMAKLWVLQDYETEVWSLRYHVKLPVARMRS 300
WMVSPNVDGYGAHLVEIDGGMLGIGIVTQGMAKLWVLQDYETEVWSLRYHVKLPVARMRS
Sbjct: 241 WMVSPNVDGYGAHLVEIDGGMLGIGIVTQGMAKLWVLQDYETEVWSLRYHVKLPVARMRS 300
Query: 301 IAREGFFSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKIHLDNMLPCAMRHCLKESLV 360
IAREGFFSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKIHLDNMLPCAMRHCLKESLV
Sbjct: 301 IAREGFFSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKIHLDNMLPCAMRHCLKESLV 360
Query: 361 NHAFFGRHGGAHVGQPQFFCGL 382
NHAFFGRHGGAHVGQPQFFCGL
Sbjct: 361 NHAFFGRHGGAHVGQPQFFCGL 382
>Os10g0124500 Cyclin-like F-box domain containing protein
Length = 457
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/382 (39%), Positives = 201/382 (52%), Gaps = 47/382 (12%)
Query: 9 SAAAGPVLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQPPRPLVFG 68
+A AG +P+E+ EIL RLPA +L C AVCR WR +A++ FLL HHR QP PLV
Sbjct: 92 AAVAGLPIPEEIQEEILLRLPANSVLHCRAVCRSWRHIASTHAFLLRHHRRQPEFPLV-- 149
Query: 69 CARWRSGXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIHSSCDGLLLFVSGRA 128
+R+ ++ AERR + F F I +SCDGLL+ V G
Sbjct: 150 -TSFRNPAPADQWMPNCLDAILLRSAERRPIFSFP-RPFCGGFPITASCDGLLI-VGG-- 204
Query: 129 FYICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKYPDA---------VCIL 179
YICNP TRQ P+ T + V LY H S GEYRVL + D C+L
Sbjct: 205 -YICNPTTRQRAPISRWT-IDNIVGLYRHEPS--GEYRVLYFASSDTPSEVYCPICYCVL 260
Query: 180 AVGSSEKPRRIGLPEAFLPPVFWIDE--IG------FLPPVLLHGCLHWHLRKPE----D 227
AVGS+ KPR+I P + P +DE IG F PVL+HG LH H +K +
Sbjct: 261 AVGSN-KPRQI--PCSVTP----MDEEIIGAPGPMIFGRPVLIHGNLHLHWKKRRGTRYN 313
Query: 228 AILVFDTVAESFRWMVSPNVDGYGAHLVEIDGGMLGIGIVTQGMAKL--WVLQDYETEVW 285
ILVF+TVAESFR + P V+ + GML + + + + + ++L+DY+ EVW
Sbjct: 314 RILVFNTVAESFRQLRPPAVNPRNYTRLLAMDGMLAMSVSKERVMDMSIFMLEDYDHEVW 373
Query: 286 SLRYHVKLPVARMRSIAREGFFSWKIVCHRGEILVYIQSSVF--LFLCDTKGNLREKIHL 343
RY +KLP +R +G + ++V G+ILV S F L CD KGNL K
Sbjct: 374 VFRYKIKLPTMEIRRFQDQGDWWAEVVSEEGDILV----SCFGWLLHCDNKGNLVSKFQY 429
Query: 344 DNMLPCAMRHCLKESLVNHAFF 365
++ LP H +KESL+ HAFF
Sbjct: 430 NDDLPAISPHRIKESLIQHAFF 451
>Os04g0193300 Cyclin-like F-box domain containing protein
Length = 405
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 194/374 (51%), Gaps = 49/374 (13%)
Query: 16 LPDELV-WEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQPPRPLVFGCARWRS 74
LP+E+V WEIL RLP + LLRC VCR WRRL ++ DFLL HHRHQP PLV R++
Sbjct: 43 LPEEIVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLV---DRYKC 99
Query: 75 GXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIHSSCDGLLLF-VSGRAFYICN 133
R A R + + D + +SCDGLLL + G ++ICN
Sbjct: 100 NEEFLLGIVSLDR---RAAAARLQPVAQLDDTCYM-MSADASCDGLLLLSIGGIWWFICN 155
Query: 134 PATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKYPDAVC------------ILAV 181
P TRQ + L G + Y HP +GD YR+L ++ + + + +
Sbjct: 156 PITRQFGALHLLCGF-MVMGFYKHPPTGD--YRLLLYRNQELMSEHLIPGDRNTCYVYTL 212
Query: 182 GSSEKPRRIGLPEAFLPPVFWIDEIGFLPPVLLHGCLHWHLRKPEDAILVFDTVAESFRW 241
GSS+ PR IG PE V+LH LHW+ R +D ILVFDT AESFRW
Sbjct: 213 GSSDVPRCIGWPETSASGA----------TVVLHCSLHWYQRS-QDMILVFDTTAESFRW 261
Query: 242 MVSPN----VDGYGAHLVEIDGGMLGIGIVTQG--MAKLWVLQDYETEVWSLRYHVKLPV 295
M +P+ +L ++DG LG+ G + +WVLQDY+ E+WSL+Y V+LPV
Sbjct: 262 MRAPSDRMKCTLDSGNLFDMDGK-LGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPV 320
Query: 296 ARMRSIAREGFFSWK--IVCHRGEILVYIQSSVFLFLCDTKGNLREKI--HLDNMLPCAM 351
+R + G + W ++ G++LV + +LF DT+GNL + D + +
Sbjct: 321 PEIRGML-GGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGL 379
Query: 352 RHCLKESLVNHAFF 365
+ LK SLV HAFF
Sbjct: 380 K--LKPSLVQHAFF 391
>Os04g0191800 Cyclin-like F-box domain containing protein
Length = 400
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 190/398 (47%), Gaps = 65/398 (16%)
Query: 10 AAAGPVLPDELV-WEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQPPRPLVFG 68
+ G LP+ELV WEIL RLP + LLRC VCR WRRL ++ DFLLAHHRHQP PL+
Sbjct: 12 VSPGLPLPEELVVWEILVRLPPKPLLRCRLVCRAWRRLTSTRDFLLAHHRHQPSLPLIAA 71
Query: 69 CARWRSGXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIHSSCDGLLLFVSGRA 128
C L R R+ + Y + + SSCDGLLL
Sbjct: 72 C----DYADIMYLIDVLTLTLGRRRGAAARLHPVARYASTADY-LDSSCDGLLLISRNTG 126
Query: 129 ---FYICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKYP------------ 173
+ ICNP TRQ +P L G + LY H +GD YR+L ++
Sbjct: 127 PPQYSICNPTTRQFGDLP-LISGFMFLGLYQHSPTGD--YRILLYRAEKVVLEDLIPGHV 183
Query: 174 --DAVCILAVGSSEKPRRIGLPEAFLPPVFWIDEIGFLP-------PVLLHGC-LHWHLR 223
DA + +GS++ PRRIG E E+ L P LHG LHW+
Sbjct: 184 ERDASYVYTLGSNDMPRRIGWAEP---------EVSMLAGHSRRCRPAQLHGSLLHWY-H 233
Query: 224 KPEDAILVFDTVAESFRWMVSPNVDGYG--------AHLVEIDGGMLGIGIVT--QGMAK 273
+ ILVFDT AESFRWM +P +D A ++E+D LG+ + +
Sbjct: 234 SIKHMILVFDTTAESFRWMRAP-IDKTENELNRELWADVLEMD-STLGLYCCNHDKTIVN 291
Query: 274 LWVLQDYETEVWSLRYHVKLPVARMRSIAREGFFSWKIVCHRGE------ILVYIQSSVF 327
+W LQDYE EVWS++Y V+LPV +R G SW ++ + +LV SV
Sbjct: 292 IWALQDYEQEVWSIKYQVELPVTCIRGELDVG-DSWSVMVSSEDGDEVVVVLVDCGQSVL 350
Query: 328 LFLCDTKGNLREKIHLDNMLPCAMRHCLKESLVNHAFF 365
F DT G L ++ D R LK+SLV HAFF
Sbjct: 351 CF--DTDGKLLARLEHDGNDIMVTRMKLKQSLVPHAFF 386
>Os04g0194000 Cyclin-like F-box domain containing protein
Length = 370
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 193/384 (50%), Gaps = 47/384 (12%)
Query: 1 MAKRARLLSAAAGPVLPDELV-WEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRH 59
MA R+ L G LP+ELV WEIL RLP + LLRC VCR WRRL ++ FLLAHHRH
Sbjct: 1 MATRSALPPRRRG--LPEELVVWEILVRLPPKPLLRCRLVCRAWRRLTSTRGFLLAHHRH 58
Query: 60 QPPRPLV--FGCARWRSGXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIHSSC 117
QP PLV +GC L R A R R+ + F + +SC
Sbjct: 59 QPSLPLVVGYGCD---------GGSLLDILTLDRRDAARPRLHPVVRLKNAAHF-VSASC 108
Query: 118 DGLLLF---VSGRAFY-ICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKY- 172
DG+L+ G +Y +CNP TRQ +P LT G + Y H + GEYR+L +
Sbjct: 109 DGILILNMTNCGEFYYSVCNPTTRQFADLPMLT-GFFVMGFYQHRPT--GEYRLLLYYQF 165
Query: 173 -PD------AVCILAVGSSEKPRRIGLPEAFLPPVFWIDEIGFLPP-VLLHGCLHWHLRK 224
P+ A + +GSSE PR IG W++E+ VLLHG LHW+ K
Sbjct: 166 RPEGSEDRYACYVYTLGSSEMPRCIG----------WMEEVATCTAVVLLHGSLHWYNYK 215
Query: 225 PEDAILVFDTVAESFRWMVSPNVDGYGAHLVEIDGGMLGIGIVTQG--MAKLWVLQDYET 282
D IL+F+T +ESF W + G L EID G LGI + +WVLQDY+T
Sbjct: 216 -TDKILIFNTASESF-WSMRQADKMNGNDLFEID-GTLGIYFCNDDATIVDIWVLQDYKT 272
Query: 283 EVWSLRYHVKLPVARMRSIAREG-FFSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKI 341
E WSL++ ++LPV ++ +G +S ++ G++LV + +L T G L
Sbjct: 273 EFWSLKHRIELPVPDIKGKLDDGDDWSAMVLSEDGDVLVLVYYRQWLLYIGTDGKLLASF 332
Query: 342 HLDNMLPCAMRHCLKESLVNHAFF 365
D LK+SLV HAFF
Sbjct: 333 QHDVGCHYNTPLKLKQSLVPHAFF 356
>Os10g0391200 Cyclin-like F-box domain containing protein
Length = 492
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 188/367 (51%), Gaps = 38/367 (10%)
Query: 16 LPDELVW-EILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQPPRPLVFGCARWRS 74
L DE+V EIL RLPAR +LRC AVC WRRL + FL AHH Q PL++ +R
Sbjct: 145 LDDEMVLCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLIY----FRR 200
Query: 75 GXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIHSSCDGLLLFVSGRAFYICNP 134
G H A+ R V+ + + + +SCDGLLL SGR FYICNP
Sbjct: 201 GGSDRVGAIDL------HAAQLRPVVDHT--WPPLGYTVIASCDGLLLLSSGR-FYICNP 251
Query: 135 ATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKY-PDAVC---ILAVGSSEKPRRI 190
AT +P L + LYPH S GEYRVL ++ + C IL +GS E PR I
Sbjct: 252 ATNHWAEIPQLVDADF-LGLYPHNPS--GEYRVLYGEFHGEEECVYHILTLGSDE-PRCI 307
Query: 191 GLP------EAFLPPVFWIDEIGFLPPVLLHGCLHWHLRKPEDA--ILVFDTVAESFRWM 242
+ E L F + G VL+ G LHW+LR + I+VFDT +ESF+WM
Sbjct: 308 TMTMGSETVEQPLAREFLMHARGD-RSVLVRGNLHWYLRHRDGGCKIMVFDTASESFQWM 366
Query: 243 VSPNVDGYGAHLVEIDGGMLGIGIVTQGMAKLWVLQDYETEVWSLRYHVKLPVARMRSIA 302
P + G+ L+E+D ++ + LWVLQDYE W+ ++ ++LP+A++R
Sbjct: 367 RHPAIPGW-VSLLEMDSTLVFSAVECTTRIDLWVLQDYERSTWACKHRIELPMAQIRQFP 425
Query: 303 REGF----FSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKIHLDNMLPCAMRHCLKES 358
+S +V G++LV + S + CD KGN+ D LP H LKE+
Sbjct: 426 ECNLEHLGWSAMVVSVEGDVLV--RCSNRILHCDRKGNVLASFQFDGQLPMNCLHRLKEN 483
Query: 359 LVNHAFF 365
LV H FF
Sbjct: 484 LVVHPFF 490
>Os12g0128000 Cyclin-like F-box domain containing protein
Length = 399
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 191/397 (48%), Gaps = 27/397 (6%)
Query: 3 KRARLLSAAAGPVLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQPP 62
+R R L+ A+ LP+E++ EIL LP + +L+C AVC+ WR + + FLL HHR QPP
Sbjct: 13 QRRRPLTIAS---LPEEIMSEILLLLPPKSILQCRAVCKAWRDVTSDRAFLLTHHRRQPP 69
Query: 63 RPLVFGCARWRSGXXXXXXXXXXXXXLIRHPAERRRVLGFS--DYR---QHQSFKIHSSC 117
+ L+ S + + + + F+ DY + F +H+SC
Sbjct: 70 QRLLTFIRDVGSHHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVHASC 129
Query: 118 DGLLLFVSGRAFYICNPATRQ---VTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWK--- 171
DGLLL ++CNP TRQ V+P PAL V LY H EYRVL ++
Sbjct: 130 DGLLLMSYNNYLHLCNPTTRQWLWVSP-PALQHDKV-VGLYAH--GHPSEYRVLYYREFG 185
Query: 172 YPDAVCILAVGSSEKPRRIGLPEAFLPPVFWI----DEIGFLPPVLLHGCLHWHLRK-PE 226
I VGS K RRI + W+ ++ F P L HG LHW + +
Sbjct: 186 LGRTFYITTVGS-RKERRIWPHSSSESLRKWLTKGTEDTEFNKPFLFHGNLHWLPQSGRQ 244
Query: 227 DAILVFDTVAESFRWMVSPNVDGYGAHLVEIDGGM-LGIGIVTQGMAKLWVLQDYETEVW 285
+ I+VFDT+ E+FRW+ P + L+EI+G + + + LW+LQDY+ VW
Sbjct: 245 NKIVVFDTLDEAFRWLHVPFKMHNVSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVW 304
Query: 286 SLRYHVKLPVARMRSIAREGFFSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKIHLDN 345
+Y ++LPV +R + + + IV G++LV S + F D KGNL EK
Sbjct: 305 VHKYRIELPVIEIRRLVEDDVWFLHIVSQEGDVLV--DGSYWQFHYDMKGNLLEKFQCSG 362
Query: 346 MLPCAMRHCLKESLVNHAFFGRHGGAHVGQPQFFCGL 382
+ H L+ESLV H F P FF GL
Sbjct: 363 RMLNITPHILQESLVPHEVFQILDNESRHAPHFFRGL 399
>Os02g0543200 Cyclin-like F-box domain containing protein
Length = 493
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 176/412 (42%), Gaps = 44/412 (10%)
Query: 6 RLLSAAAGPVLPDEL-------VWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHR 58
R L AG P EL + ++L R+PA + RC VCR R L + F H R
Sbjct: 89 RDLPNVAGIRAPRELRRVEVDALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQR 148
Query: 59 HQP--PRPLVFGCARWRSGXXXXXXXXXXXXXLIRHPA-ERRRVLGFS----DYRQHQS- 110
H+ P PL F +R + A E V+ FS D R
Sbjct: 149 HRSRHPMPLFF----YRLDHWAFPDRVRVHLRAVDVAARETHPVICFSHADADLRSADPR 204
Query: 111 -FKIHSSCDGLLLFVSGRAFYICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLK 169
F I SCDG+LL Y CNP+TR+ +P L V Y H + + EYRVL
Sbjct: 205 VFTIEGSCDGILLLSYHTRLYACNPSTRRWRRLPPLHDDHVIVGFYGHGAIDEREYRVLY 264
Query: 170 WKYPDA----VCILAVGSSEKPRRIGLPEAFLPPVFWIDEIGF-----LPPVLLHGCLHW 220
V L+ + PR IG P A L V + G +PPV + LHW
Sbjct: 265 HTARPGCRYWVFSLSFFPDQPPRDIGRP-ADLEAVRAVLAEGISPSYEMPPVAIAHRLHW 323
Query: 221 HLRKPEDAILVFDTVAESFRWMVSPN-------VDGYGAHLVEIDGGMLGIGIVTQGMAK 273
+ +LVFDTVAESF W+ PN + G L+EI+ G L + +V+Q
Sbjct: 324 RAQAASLNVLVFDTVAESFGWIPPPNQQEGNQMIPVEGDQLLEIN-GRLAMTLVSQTTVD 382
Query: 274 LWVLQDYETEVWSLRYHVKLPVARMRSIA---REGFFSWKIVCHRGEILVYIQSSVFLFL 330
+WVLQ E E W Y + LPV + EGF S + E V Q +
Sbjct: 383 VWVLQ--EGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAAVFAVSQERNVLAQCPAMMLQ 440
Query: 331 CDTKGNLREKIHLDNMLPCAMRHCLKESLVNHAFFG-RHGGAHVGQPQFFCG 381
CDT+GN+ L L R+ L+ESL+ HAF R A G P FF G
Sbjct: 441 CDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQEDAIDGDPPFFQG 492
>Os11g0131300
Length = 389
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 176/377 (46%), Gaps = 27/377 (7%)
Query: 3 KRARLLSAAAGPVLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQPP 62
+R R L+ A LP+E++ EIL LP + +L+C AVC+ WR + + FLL HH QPP
Sbjct: 8 QRRRPLTIAN---LPEEILSEILLLLPPKSILQCRAVCKVWRDVTSDRAFLLPHHCRQPP 64
Query: 63 RPLV--FGCARWRSGXXXXXXXXXXXXXLIRHPAERRRVLGFSDYR---QHQSFKIHSSC 117
+ L+ R H + DY + F +H+SC
Sbjct: 65 QRLLTFIRDVGSRHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVHASC 124
Query: 118 DGLLLFVSGRAFYICNPATRQVTPV-PALTGGGSQVTLYPHPSSGDGEYRVLKWKY---- 172
DGLLL ++CNP TRQ V P + + LY H S EYRVL ++
Sbjct: 125 DGLLLMSYNNYLHLCNPTTRQWLWVFPPALQHDTVLGLYSHGHSS--EYRVLYYREIGLG 182
Query: 173 PDAVCILAVGSSEKPRRIGLPEAFLPPVFWI----DEIGFLPPVLLHGCLHW--HLRKPE 226
P+ +++ S K R I + W+ +E F P L HG LHW HL +
Sbjct: 183 PEFY--ISIVGSGKERSIWPHSSSASLRKWLAKGKEETQFNEPFLFHGNLHWLPHL-GGQ 239
Query: 227 DAILVFDTVAESFRWMVSPNVDGYGAHLVEIDGGM-LGIGIVTQGMAKLWVLQDYETEVW 285
+ I+VFDT+ E FRW+ P + L+EI+G + + + LW+LQDY+ VW
Sbjct: 240 NKIVVFDTLDEVFRWLHVPFKMHNMSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVW 299
Query: 286 SLRYHVKLPVARMRSIAREGFFSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKIHLDN 345
+Y ++LPV +R + + IV G++LV + F D KGNL EK
Sbjct: 300 VHKYRIELPVIEIRRFEEDDGWYLHIVSQEGDVLV--DGFDWQFHYDIKGNLLEKFQCSG 357
Query: 346 MLPCAMRHCLKESLVNH 362
+ H L+ESLV H
Sbjct: 358 RMLNITPHILQESLVPH 374
>Os04g0191600 F-box associated type 1 domain containing protein
Length = 239
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 101/203 (49%), Gaps = 27/203 (13%)
Query: 174 DAVCILAVGSSEKPRRIGLPEAFLPPVFWIDEIGFLPPVLLHGCLHWHLRKPEDAILVFD 233
+A + +GS + PR IG PEA + G VLLHG LHW+ ++ ED IL FD
Sbjct: 39 NACYVYTLGSGDLPRCIGWPEA--------EANG--ASVLLHGSLHWY-KRIEDMILAFD 87
Query: 234 TVAESFRWMVSPNVDGYGAH-------LVEIDGGMLGIGIVTQG--MAKLWVLQDYETEV 284
AESFRWM SP +G L EI+ MLG+ G +WVL+DYE EV
Sbjct: 88 ITAESFRWMRSP----FGKAVWRAFHGLFEINC-MLGMYCCDDGATFVDIWVLEDYEREV 142
Query: 285 WSLRYHVKLPVARMRS--IAREGFFSWKIVCHRGEILVYIQSSVFLFLCDTKGNLREKIH 342
WSL+Y V+LPV +R + +S + G++LV + + T G L +
Sbjct: 143 WSLKYRVELPVLEIRRELDVKRDLYSVMVSSEDGDVLVLVNCKRAMLYIGTDGKLLASLP 202
Query: 343 LDNMLPCAMRHCLKESLVNHAFF 365
DN L+ SLV HAFF
Sbjct: 203 HDNDGLSITPVKLRASLVPHAFF 225
>Os07g0269800 Cyclin-like F-box domain containing protein
Length = 754
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 132/329 (40%), Gaps = 43/329 (13%)
Query: 1 MAKRARLLSAAAGP--VLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFL---LA 55
M+ + R +S A+G VLP+E++ E+L LP +LR AVCR W +S F A
Sbjct: 4 MSCKRRKVSPASGATVVLPEEMMIEVLQWLPVESVLRFRAVCRSWATALSSDQFRGFHTA 63
Query: 56 HHRHQPPRPLVFGCARWRS-GXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIH 114
++ +P P +F ++ G + R + + R
Sbjct: 64 KNKIKPLPPKLFFVSQTAGFGSTSVHTSSPLSRSVPGGDNHRDLLFNLDNVRGDFMAMTP 123
Query: 115 SSCDGLLLF--VSGRAFYICNPATRQVTPVPALTGGGSQVTLYPHPSSG------DGEYR 166
+ C GL L G +Y+ N ATR ++ +P P S+G GEY+
Sbjct: 124 TPCHGLTLLHDAMGLEYYVLNAATRSISRLPP-------CQTVPSGSAGLGFDARTGEYK 176
Query: 167 VLKW------KYPDAVCILAV-----GSSEKPRRIGLPEAFLPPVFW---IDEIGFLPPV 212
V++ P C + G S +P G+P F + + L PV
Sbjct: 177 VVRLFREIISGEPHTKCQIYTLGGKHGDSWRPASGGVPFKFRTAGTYSISASQQHKLLPV 236
Query: 213 LLHGCLHW------HLRKPEDAILVFDTVAESFRWMVSPNVDGYGAHLVEIDGGMLGIGI 266
+ G LHW +P AIL F E+FR + SP G HLV++ G + +
Sbjct: 237 FVDGFLHWLTGSLFSFLRPHAAILSFSVTEETFRLVRSPPFQVSGVHLVDLSGNLCMVRD 296
Query: 267 V--TQGMAKLWVLQDYETEVWSLRYHVKL 293
+ ++W L D + WSL + + L
Sbjct: 297 LRRMSSTLEIWKLNDLYSSDWSLEHRIDL 325
>Os07g0268000 Cyclin-like F-box domain containing protein
Length = 738
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 130/326 (39%), Gaps = 42/326 (12%)
Query: 3 KRARLLSAAAGPV-LPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFL---LAHHR 58
KR ++ A+ PV LP+E++ E+L LP +L AVCR W +S F A ++
Sbjct: 7 KRRKVSPASGAPVVLPEEMMIEVLQWLPVESVLCFRAVCRSWATALSSDQFRGFHTAKNK 66
Query: 59 HQPPRPLVFGCARWRS-GXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSFKIHSSC 117
+P P +F ++ G ++ R + + R + C
Sbjct: 67 IKPLPPKLFFVSQTAGFGSTSVHASSPLSRSVLGGDDHRDLLFNLDNVRGDFMAMTPTPC 126
Query: 118 DGLLLF--VSGRAFYICNPATRQVTPVPALTGGGSQVTLYPHPSSG------DGEYRVLK 169
GL L G +Y+ N ATR ++ +P P S+G GEY+V++
Sbjct: 127 HGLTLLHDAMGLEYYVLNVATRSISRLPP-------CQTVPSGSAGLGFDARTGEYKVVR 179
Query: 170 W------KYPDAVCILAV-----GSSEKPRRIGLPEAFLPPVFW---IDEIGFLPPVLLH 215
P C + G S +P G+P F + + L PV +
Sbjct: 180 LFREIISGEPHTKCQIYTLGGKHGDSWRPASGGVPFKFRTAGTYSILASQQHKLLPVFVD 239
Query: 216 GCLHW------HLRKPEDAILVFDTVAESFRWMVSPNVDGYGAHLVEIDGGMLGIGIV-- 267
G LHW +P AIL F E+FR + SP G HLV++ G + + +
Sbjct: 240 GFLHWLTGSLFSFLRPHAAILSFSVTEETFRLVRSPPFQVSGVHLVDLSGNLCMVRDLRR 299
Query: 268 TQGMAKLWVLQDYETEVWSLRYHVKL 293
++W L D + WSL + + L
Sbjct: 300 MSSTLEIWKLNDLYSSDWSLEHRIDL 325
>Os10g0396100 Cyclin-like F-box domain containing protein
Length = 425
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 128/329 (38%), Gaps = 44/329 (13%)
Query: 10 AAAGPVLPDELVWEILARLPARGLLRCHAVCRDWRRLATSADFLLA-------------- 55
AA LPD+LV +IL RLPAR + R AVCR WR LAT F+LA
Sbjct: 5 AALRAYLPDDLVADILTRLPARSVCRFRAVCRSWRALATERQFVLAHAARDRAAAVPMNH 64
Query: 56 HHR--HQP--PRPLVFGCARWRSGXXXXXXXXXXXXXLIRHPAERRRVLGFSDYRQHQSF 111
HHR H P P P R G R+ +R L + R+ +
Sbjct: 65 HHRKVHPPFSPSP--------RRGGGEPTVMLAFVMICRRNEPDRSFYL---ESREDGAC 113
Query: 112 KIHSSCDGLLLFVSGRAFYICNPATRQVTPVPA--------LTGGGSQVTLYPHPSSGDG 163
K+ DG++ R C V P+ + GG + Y HP +
Sbjct: 114 KLLGCWDGMMCIDVRRDSPACRDGIVVVNPISMAYAVVRSPMPDGGEFIAGYAHPDTFAF 173
Query: 164 EYRVLKWKYPDAVCILAVGSSEKPRRIGLPEAFLPPVFWIDEIGFLPPVLLHGCLHWHLR 223
+ + + R I + + + D+ G + V LHG LHW LR
Sbjct: 174 HLMYCCHNQGKVIFQVIKAGDSQWREIAADRLAISGIDF-DKQG-ISSVALHGGLHWQLR 231
Query: 224 KPED--AILVFDTVAESFRWMVSPNVDGYGAHLVEIDGGMLGIGIVTQGM-AKLWVLQDY 280
+LV+D V E FR + +P + + G L ++ + M A++WVL+DY
Sbjct: 232 TNSGQWVMLVYDMVTEKFRSIAAPQCAITWVRGLSVLSGRLCSIVIPESMTAEIWVLEDY 291
Query: 281 -ETEVWSLRYHVKLPVARMRSIAREGFFS 308
E W + + + R I E F+
Sbjct: 292 HEHRSWHCIREIDMAASAER-INLENFWD 319
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.143 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,713,451
Number of extensions: 733239
Number of successful extensions: 2467
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 2432
Number of HSP's successfully gapped: 14
Length of query: 382
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 279
Effective length of database: 11,657,759
Effective search space: 3252514761
Effective search space used: 3252514761
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 157 (65.1 bits)