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Os04g0194000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.48 (0.0214) R2 : 0.466
β1 : 0.944 (0.0782) R2dD : 0.177 R2D : 0.126
β2 : 0.875 (0.0552) R2dC : 0.295 R2C : 0.266
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.272 (0.0456) R2dN8 : 0.0559 R2N8 : 0.00333
σ : 0.402
deviance : 73.58
__
_____
C
peak time of C : 16.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.82 0.375 7.48 0.812 0.812 0.518 -0.0513 1.32 0.287 17.1 61.11 1239 -- --
66.24 0.379 7.47 0.945 0.834 0.616 0.135 -- 0.333 16.8 64 1358 -- --
63.8 0.372 7.47 0.814 0.814 0.527 -- 1.37 0.292 17.1 63 1236 -- --
66.26 0.379 7.47 0.952 0.826 0.623 -- -- 0.331 16.9 64 1353 -- --
93.34 0.452 7.48 0.947 -- -0.596 -- -0.42 0.223 -- 63.41 1254 -- --
73.47 0.402 7.48 0.943 0.872 -- 0.213 -- 0.271 16.7 -- -- -- --
73.58 0.402 7.48 0.944 0.875 -- -- -- 0.272 16.7 -- -- -- --
93.92 0.453 7.48 0.932 -- -0.602 -- -- 0.218 -- 64 1353 -- --
87.55 0.436 7.47 -- 0.985 0.841 -- -- 0.322 17.2 81.14 2082 -- --
114.15 0.499 7.47 0.911 -- -- -- -- 0.249 -- -- -- -- --
97.08 0.461 7.5 -- 0.857 -- -- -- 0.167 16.7 -- -- -- --
116.35 0.504 7.51 -- -- -0.557 -- -- 0.0903 -- 73.3 2682 -- --
136.05 0.544 7.5 -- -- -- -- -- 0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.20 temperature 20.0 270 > th dose independent rect. 6 17
3 58.55 temperature 20.0 270 > th dose independent rect. 5 20
5 59.14 radiation 10.0 14400 < th dose dependent rect. 19 8
6 59.23 wind 9.0 270 < th dose dependent rect. 6 17
7 59.35 temperature 25.0 270 < th dose independent rect. 1 4
8 59.42 wind 9.0 270 < th dose dependent rect. 6 7
11 59.50 temperature 30.0 270 < th dose dependent rect. 1 4
14 59.65 temperature 25.0 90 < th dose independent rect. 2 6
16 59.66 temperature 30.0 270 < th dose dependent rect. 24 6
20 59.81 wind 9.0 270 < th dose dependent rect. 5 20
24 60.06 wind 5.0 270 < th dose independent rect. 6 17
27 60.12 precipitation 0.1 14400 > th dose independent rect. 17 1
39 60.35 wind 5.0 270 < th dose independent rect. 5 20
43 60.44 temperature 10.0 10 > th dose dependent rect. 6 20
45 60.49 wind 5.0 270 < th dose independent rect. 6 7
49 60.55 temperature 30.0 10 < th dose dependent rect. 2 7
88 60.99 radiation 10.0 14400 < th dose dependent rect. 22 5
95 61.03 precipitation 0.1 14400 < th dose independent rect. 17 1
96 61.03 precipitation 0.1 14400 < th dose dependent rect. 17 1
102 61.10 precipitation 0.1 14400 > th dose dependent rect. 17 1
108 61.17 precipitation 0.1 270 < th dose independent rect. 23 7
109 61.17 precipitation 0.1 270 < th dose dependent rect. 23 7
111 61.19 wind 1.0 43200 > th dose dependent rect. 24 4
117 61.27 wind 1.0 43200 > th dose dependent rect. 23 6
120 61.28 wind 1.0 270 > th dose independent rect. 13 15
129 61.37 temperature 15.0 270 > th dose independent rect. 5 8
131 61.38 wind 9.0 270 < th dose independent rect. 5 8
132 61.38 humidity 70.0 1440 > th dose dependent rect. 5 3
139 61.42 precipitation 0.1 270 < th dose independent rect. 6 17
142 61.42 precipitation 0.1 270 < th dose dependent rect. 6 17
147 61.46 wind 9.0 270 < th dose independent rect. 6 17
148 61.46 humidity 90.0 1440 < th dose dependent rect. 5 3
151 61.49 wind 7.0 270 < th dose independent rect. 24 6
156 61.51 atmosphere 995.0 270 > th dose independent rect. 5 8
157 61.51 atmosphere 1015.0 270 < th dose independent rect. 5 8
158 61.51 temperature 10.0 270 > th dose independent rect. 13 16
167 61.55 precipitation 0.1 270 < th dose independent rect. 5 8
170 61.55 precipitation 0.1 270 < th dose dependent rect. 5 8
177 61.61 temperature 10.0 270 > th dose independent rect. 24 6
179 61.61 humidity 50.0 270 > th dose independent rect. 24 6
182 61.61 atmosphere 995.0 270 > th dose independent rect. 24 6
183 61.61 atmosphere 1015.0 270 < th dose independent rect. 24 6
184 61.61 radiation 20.0 270 < th dose independent rect. 24 6
202 61.62 wind 5.0 43200 < th dose dependent rect. 24 5
211 61.66 wind 9.0 270 < th dose independent rect. 13 16
218 61.68 radiation 40.0 1440 > th dose dependent rect. 14 19
232 61.75 temperature 20.0 10 > th dose independent rect. 6 8
237 61.76 radiation 40.0 270 < th dose dependent rect. 24 6
240 61.77 temperature 10.0 10 > th dose dependent rect. 6 8
249 61.80 precipitation 0.1 270 < th dose independent rect. 17 8
252 61.80 precipitation 0.1 270 < th dose dependent rect. 17 8
263 61.84 temperature 20.0 270 > th dose independent rect. 19 17
272 61.89 humidity 70.0 14400 < th dose independent rect. 11 1
274 61.89 precipitation 0.1 270 < th dose independent rect. 1 16
275 61.89 precipitation 0.1 270 < th dose dependent rect. 1 16
287 61.93 temperature 15.0 270 > th dose independent rect. 17 8
299 61.97 precipitation 0.1 270 < th dose independent rect. 13 16
301 61.97 precipitation 0.1 270 < th dose dependent rect. 13 16
344 62.10 radiation 20.0 270 < th dose independent rect. 17 8
347 62.10 temperature 10.0 270 > th dose independent rect. 1 16
348 62.10 atmosphere 1015.0 270 < th dose independent rect. 1 16
373 62.16 wind 9.0 270 < th dose independent rect. 17 8
378 62.18 temperature 20.0 10 > th dose independent rect. 6 20
390 62.21 humidity 50.0 270 > th dose independent rect. 17 8
392 62.21 radiation 40.0 270 < th dose dependent rect. 17 8
393 62.22 radiation 30.0 90 < th dose independent rect. 15 15
417 62.28 atmosphere 995.0 270 > th dose independent rect. 17 8
442 62.32 wind 3.0 43200 < th dose independent rect. 24 4
459 62.35 wind 5.0 43200 < th dose dependent rect. 2 1
471 62.38 temperature 10.0 10 > th dose dependent rect. 6 10
476 62.40 wind 1.0 270 > th dose independent rect. 1 3
484 62.41 atmosphere 995.0 270 > th dose independent rect. 13 16
485 62.41 radiation 40.0 1440 > th dose dependent rect. 14 1
490 62.42 wind 9.0 10 < th dose independent rect. 6 8
494 62.42 temperature 10.0 270 > th dose dependent rect. 19 16
497 62.43 radiation 40.0 270 < th dose dependent rect. 15 10
499 62.44 temperature 10.0 10 > th dose independent rect. 6 8
501 62.44 atmosphere 995.0 10 > th dose independent rect. 6 8
502 62.44 atmosphere 1015.0 10 < th dose independent rect. 6 8
503 62.44 temperature 10.0 10 > th dose independent rect. 14 16
508 62.45 precipitation 0.1 10 < th dose independent rect. 6 8
509 62.45 radiation 40.0 10 < th dose independent rect. 14 16
511 62.45 precipitation 0.1 10 < th dose dependent rect. 6 8
517 62.47 atmosphere 995.0 270 > th dose independent rect. 1 16
545 62.49 wind 9.0 270 < th dose independent rect. 1 16
548 62.50 wind 1.0 270 > th dose independent rect. 2 1
552 62.52 temperature 20.0 10 > th dose independent rect. 6 10
554 62.52 wind 3.0 43200 < th dose dependent rect. 4 1
558 62.53 wind 1.0 270 > th dose independent rect. 11 9
564 62.54 humidity 70.0 14400 > th dose independent rect. 11 1
590 62.60 wind 3.0 43200 > th dose independent rect. 24 4
603 62.62 temperature 10.0 1440 > th dose independent rect. 7 8
606 62.62 temperature 10.0 1440 > th dose independent rect. 15 16
622 62.64 radiation 40.0 1440 > th dose independent rect. 14 19
634 62.65 humidity 80.0 720 < th dose dependent rect. 18 14
647 62.67 wind 9.0 270 < th dose dependent rect. 24 6
657 62.69 wind 9.0 10 < th dose independent rect. 14 16
684 62.71 wind 5.0 270 < th dose independent rect. 19 17
700 62.74 temperature 25.0 14400 > th dose dependent rect. 1 1
735 62.79 wind 1.0 270 > th dose independent rect. 24 6
736 62.79 humidity 50.0 270 > th dose independent rect. 6 6
758 62.81 radiation 1.0 270 < th dose dependent sin 5 NA
802 62.87 wind 9.0 10 < th dose independent rect. 6 10
809 62.88 atmosphere 1015.0 270 < th dose independent rect. 13 16
838 62.90 precipitation 0.1 10 < th dose independent rect. 14 16
840 62.90 atmosphere 995.0 270 > th dose independent rect. 6 18
845 62.90 temperature 10.0 270 > th dose dependent rect. 18 7
847 62.90 radiation 40.0 10 < th dose dependent rect. 14 16
848 62.90 precipitation 0.1 10 < th dose dependent rect. 14 16
852 62.91 radiation 1.0 10 > th dose independent rect. 6 8
862 62.92 humidity 50.0 270 > th dose independent rect. 13 17
866 62.92 radiation 1.0 270 < th dose dependent rect. 1 10
867 62.92 temperature 10.0 10 > th dose dependent rect. 22 14
879 62.94 radiation 1.0 270 < th dose dependent rect. 11 14
881 62.95 wind 5.0 270 < th dose independent rect. 20 15
907 62.98 humidity 50.0 30 > th dose independent rect. 14 16
909 62.98 wind 1.0 43200 > th dose dependent rect. 4 1
916 62.99 radiation 1.0 270 > th dose independent rect. 6 6
924 62.99 radiation 1.0 90 < th dose dependent rect. 6 20
926 63.00 atmosphere 995.0 10 > th dose independent rect. 14 16
959 63.02 temperature 10.0 10 > th dose independent rect. 6 10
961 63.02 atmosphere 1015.0 10 < th dose independent rect. 6 10
962 63.02 temperature 10.0 10 > th dose independent rect. 16 14
965 63.02 atmosphere 1015.0 270 < th dose independent rect. 6 17
967 63.02 humidity 70.0 1440 > th dose dependent sin 6 NA
972 63.03 atmosphere 1005.0 14400 < th dose independent rect. 16 1
975 63.03 precipitation 0.1 10 < th dose independent rect. 6 10
979 63.03 precipitation 0.1 10 < th dose dependent rect. 6 10
981 63.04 atmosphere 995.0 90 > th dose independent rect. 15 15