Os10g0396100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0396100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.42 | 0.413 | 6.46 | 0.831 | 0.825 | -0.808 | 0.185 | -1.55 | 0.382 | 2.68 | 25.01 | 106 | -- | -- |
| 80.35 | 0.421 | 6.49 | 0.606 | 0.808 | -0.651 | -0.305 | -- | 0.338 | 2.59 | 25.01 | 106 | -- | -- |
| 77.5 | 0.41 | 6.47 | 0.807 | 0.823 | -0.798 | -- | -1.43 | 0.377 | 2.69 | 25 | 107 | -- | -- |
| 80.68 | 0.421 | 6.49 | 0.613 | 0.807 | -0.653 | -- | -- | 0.339 | 2.57 | 25.01 | 106 | -- | -- |
| 105.6 | 0.479 | 6.46 | 0.864 | -- | -0.752 | -- | -1.47 | 0.399 | -- | 25.4 | 1089 | -- | -- |
| 86.66 | 0.436 | 6.46 | 0.758 | 0.686 | -- | -0.326 | -- | 0.465 | 2.83 | -- | -- | -- | -- |
| 87.02 | 0.437 | 6.46 | 0.766 | 0.684 | -- | -- | -- | 0.467 | 2.8 | -- | -- | -- | -- |
| 108.1 | 0.484 | 6.48 | 0.666 | -- | -0.621 | -- | -- | 0.333 | -- | 26.3 | 1070 | -- | -- |
| 89.71 | 0.444 | 6.52 | -- | 0.862 | -0.884 | -- | -- | 0.232 | 2.51 | 25.01 | 106 | -- | -- |
| 114.15 | 0.499 | 6.46 | 0.795 | -- | -- | -- | -- | 0.484 | -- | -- | -- | -- | -- |
| 102.48 | 0.474 | 6.48 | -- | 0.699 | -- | -- | -- | 0.381 | 2.81 | -- | -- | -- | -- |
| 116.35 | 0.502 | 6.52 | -- | -- | -0.904 | -- | -- | 0.223 | -- | 26.31 | 1079 | -- | -- |
| 130.81 | 0.534 | 6.48 | -- | -- | -- | -- | -- | 0.396 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 73.49 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 3 | 73.84 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 74.13 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 5 | 74.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 7 | 74.19 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 13 | 74.23 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 17 | 74.32 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 21 | 74.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 22 | 74.39 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 5 | 7 |
| 50 | 74.64 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 53 | 74.66 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 64 | 74.73 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 126 | 75.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 128 | 75.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 143 | 75.18 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 12 | 17 |
| 154 | 75.26 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 155 | 75.26 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 169 | 75.34 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 171 | 75.34 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 184 | 75.40 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 196 | 75.45 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 197 | 75.45 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 212 | 75.51 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 218 | 75.53 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 281 | 75.79 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 298 | 75.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 302 | 75.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 304 | 75.85 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 324 | 75.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 333 | 75.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 335 | 75.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 355 | 75.98 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 357 | 75.98 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 375 | 76.03 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 401 | 76.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 457 | 76.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 458 | 76.27 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 460 | 76.27 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 463 | 76.28 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 498 | 76.38 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 499 | 76.39 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 505 | 76.40 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 506 | 76.42 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 508 | 76.42 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 513 | 76.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 527 | 76.48 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 607 | 76.66 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 612 | 76.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 633 | 76.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 640 | 76.74 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 653 | 76.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 655 | 76.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 670 | 76.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 672 | 76.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 678 | 76.80 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 706 | 76.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 708 | 76.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 719 | 76.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 720 | 76.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 732 | 76.92 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 734 | 76.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 735 | 76.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 752 | 76.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 20 |
| 753 | 76.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 20 |
| 754 | 76.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 756 | 76.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 20 |
| 762 | 76.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 769 | 76.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 809 | 77.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 827 | 77.07 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 845 | 77.10 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 861 | 77.12 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 872 | 77.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 876 | 77.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 18 |
| 951 | 77.26 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 955 | 77.26 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 956 | 77.27 | temperature | 25.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 959 | 77.27 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 985 | 77.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |