Os10g0124500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0124500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.07 | 0.345 | 10.1 | 2.61 | 1.02 | -0.694 | -0.33 | 0.755 | 0.618 | 23.4 | 24.99 | 1500 | -- | -- |
| 54.39 | 0.343 | 10.1 | 2.41 | 0.992 | -0.626 | -0.265 | -- | 0.573 | 23.3 | 24.91 | 1530 | -- | -- |
| 54.54 | 0.344 | 10.1 | 2.62 | 1.02 | -0.695 | -- | 0.734 | 0.617 | 23.3 | 25.02 | 1500 | -- | -- |
| 54.74 | 0.345 | 10.1 | 2.41 | 1.02 | -0.626 | -- | -- | 0.561 | 23.3 | 25.1 | 1520 | -- | -- |
| 99.52 | 0.467 | 10.1 | 2.55 | -- | -1.26 | -- | 1.62 | 0.623 | -- | 25.02 | 1500 | -- | -- |
| 70.22 | 0.393 | 10.2 | 2.17 | 0.986 | -- | -0.369 | -- | 0.484 | 23.3 | -- | -- | -- | -- |
| 70.8 | 0.394 | 10.2 | 2.19 | 0.988 | -- | -- | -- | 0.486 | 23.3 | -- | -- | -- | -- |
| 94.01 | 0.454 | 10.1 | 2.43 | -- | -1.23 | -- | -- | 0.671 | -- | 22.7 | 1592 | -- | -- |
| 195.27 | 0.651 | 10.2 | -- | 1.03 | -0.193 | -- | -- | 0.202 | 23.5 | 34 | 3217 | -- | -- |
| 131.92 | 0.537 | 10.1 | 2.21 | -- | -- | -- | -- | 0.495 | -- | -- | -- | -- | -- |
| 197.1 | 0.657 | 10.2 | -- | 1.01 | -- | -- | -- | 0.242 | 23.4 | -- | -- | -- | -- |
| 245.01 | 0.731 | 10.2 | -- | -- | -0.792 | -- | -- | 0.347 | -- | 22.7 | 1592 | -- | -- |
| 261.2 | 0.754 | 10.2 | -- | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.21 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 50.37 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 50.54 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 4 | 50.56 | wind | 9e+00 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 5 | 50.58 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 7 | 50.62 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 8 | 50.62 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 50.72 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 10 | 50.73 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 39 | 51.65 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 40 | 51.65 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 45 | 51.77 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 47 | 51.80 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 49 | 51.81 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 64 | 51.85 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 77 | 51.94 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 116 | 52.08 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 157 | 52.18 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 170 | 52.21 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 196 | 52.25 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 220 | 52.29 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 357 | 52.40 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 371 | 52.42 | atmosphere | 1e+03 | 43200 | < th | dose independent | sin | 8 | NA |
| 398 | 52.43 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 415 | 52.45 | atmosphere | 1e+03 | 43200 | > th | dose independent | sin | 8 | NA |
| 475 | 52.48 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 544 | 52.52 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 582 | 52.53 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 10 | 17 |
| 632 | 52.55 | atmosphere | 1e+03 | 43200 | < th | dose independent | no | NA | NA |
| 653 | 52.55 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 659 | 52.56 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 799 | 52.60 | atmosphere | 1e+03 | 43200 | > th | dose independent | no | NA | NA |
| 846 | 52.61 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 849 | 52.61 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 851 | 52.61 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 17 | 7 |