Os10g0391200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0391200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.49 | 0.406 | 8.1 | 0.86 | 0.727 | -0.989 | -0.0295 | -1.15 | 0.374 | 21.1 | 79.21 | 1364 | -- | -- |
| 75.03 | 0.403 | 8.1 | 0.969 | 0.746 | -1.07 | -0.0286 | -- | 0.378 | 21.1 | 79 | 1349 | -- | -- |
| 73.95 | 0.401 | 8.1 | 0.885 | 0.722 | -1.01 | -- | -1.1 | 0.367 | 21.2 | 78.99 | 1357 | -- | -- |
| 75.02 | 0.403 | 8.1 | 0.963 | 0.735 | -1.06 | -- | -- | 0.378 | 21.1 | 79 | 1353 | -- | -- |
| 103.31 | 0.473 | 8.09 | 0.909 | -- | -1.1 | -- | -0.854 | 0.353 | -- | 78.87 | 1435 | -- | -- |
| 89.33 | 0.443 | 8.11 | 0.919 | 0.736 | -- | -0.055 | -- | 0.333 | 20.7 | -- | -- | -- | -- |
| 89.34 | 0.443 | 8.11 | 0.92 | 0.736 | -- | -- | -- | 0.333 | 20.7 | -- | -- | -- | -- |
| 104.02 | 0.475 | 8.08 | 0.971 | -- | -1.17 | -- | -- | 0.378 | -- | 78.87 | 1442 | -- | -- |
| 98.27 | 0.462 | 8.11 | -- | 0.753 | -1.01 | -- | -- | 0.331 | 21.3 | 79.4 | 2769 | -- | -- |
| 120.06 | 0.512 | 8.09 | 0.919 | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
| 111.67 | 0.494 | 8.13 | -- | 0.734 | -- | -- | -- | 0.231 | 20.8 | -- | -- | -- | -- |
| 127.48 | 0.526 | 8.09 | -- | -- | -1.1 | -- | -- | 0.324 | -- | 79 | 2960 | -- | -- |
| 142.35 | 0.557 | 8.11 | -- | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.78 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 5 | 69.38 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 6 | 69.44 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 10 | 69.97 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 27 | 70.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 30 | 70.70 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 39 | 70.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 42 | 70.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 3 |
| 58 | 71.17 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 73 | 71.38 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 79 | 71.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 88 | 71.47 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 114 | 71.74 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 124 | 71.82 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 132 | 71.87 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 137 | 71.92 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 166 | 72.11 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 193 | 72.27 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 221 | 72.40 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 228 | 72.43 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 309 | 72.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 12 |
| 355 | 72.94 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 408 | 73.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 416 | 73.13 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 426 | 73.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 427 | 73.18 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 448 | 73.24 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 460 | 73.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 465 | 73.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 535 | 73.45 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 571 | 73.56 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 573 | 73.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 578 | 73.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 596 | 73.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 598 | 73.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 649 | 73.72 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 741 | 73.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 755 | 73.91 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 772 | 73.95 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 824 | 74.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 856 | 74.09 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 857 | 74.09 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 974 | 74.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 976 | 74.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |