Os07g0269800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0269800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.48 | 0.601 | 2.95 | -0.263 | 0.157 | 0.093 | -1.67 | -1.21 | -0.0899 | 5.96 | 2.8 | 11 | -- | -- |
| 167.59 | 0.603 | 2.97 | -0.279 | 0.174 | 0.239 | -1.07 | -- | -0.107 | 6.9 | 6.5 | 17 | -- | -- |
| 164.78 | 0.602 | 2.95 | -0.272 | 0.155 | 0.07 | -- | -1 | -0.0987 | 8.32 | 2.8 | 11 | -- | -- |
| 169.27 | 0.61 | 2.98 | -0.26 | 0.124 | 0.419 | -- | -- | -0.102 | 9.56 | 7.6 | 2 | -- | -- |
| 166.03 | 0.603 | 2.95 | -0.283 | -- | 0.0397 | -- | -0.98 | -0.0961 | -- | 2.8 | 11 | -- | -- |
| 168.66 | 0.609 | 2.98 | -0.279 | 0.0974 | -- | -0.977 | -- | -0.12 | 7.26 | -- | -- | -- | -- |
| 170.75 | 0.612 | 2.98 | -0.296 | 0.126 | -- | -- | -- | -0.117 | 10.2 | -- | -- | -- | -- |
| 169.6 | 0.607 | 2.98 | -0.233 | -- | 0.584 | -- | -- | -0.0911 | -- | 7.587 | 2 | -- | -- |
| 170.22 | 0.608 | 2.98 | -- | 0.123 | 0.675 | -- | -- | -0.0822 | 9.99 | 7.582 | 3 | -- | -- |
| 171.71 | 0.612 | 2.98 | -0.298 | -- | -- | -- | -- | -0.117 | -- | -- | -- | -- | -- |
| 173.06 | 0.615 | 2.97 | -- | 0.127 | -- | -- | -- | -0.0836 | 10.4 | -- | -- | -- | -- |
| 170.95 | 0.609 | 2.97 | -- | -- | 0.739 | -- | -- | -0.0614 | -- | 7.51 | 4 | -- | -- |
| 174.05 | 0.616 | 2.97 | -- | -- | -- | -- | -- | -0.0837 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.52 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 14 |
| 4 | 149.53 | humidity | 70 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 7 | 149.69 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 26 | 150.13 | radiation | 30 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 107 | 150.21 | humidity | 80 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 108 | 150.22 | humidity | 80 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 111 | 150.23 | humidity | 80 | 90 | < th | dose independent | rect. | 6 | 1 |
| 112 | 150.23 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 115 | 150.23 | radiation | 20 | 90 | > th | dose independent | rect. | 6 | 1 |
| 202 | 150.23 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 693 | 155.48 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 782 | 157.05 | wind | 3 | 90 | > th | dose independent | rect. | 2 | 1 |
| 786 | 157.16 | humidity | 70 | 10 | < th | dose independent | sin | 10 | NA |
| 791 | 157.40 | humidity | 70 | 10 | > th | dose independent | sin | 10 | NA |
| 796 | 157.44 | radiation | 30 | 30 | < th | dose independent | sin | 11 | NA |
| 815 | 157.56 | wind | 1 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 823 | 158.00 | radiation | 30 | 30 | < th | dose independent | rect. | 21 | 14 |
| 824 | 158.02 | radiation | 20 | 720 | > th | dose dependent | rect. | 6 | 2 |
| 838 | 158.07 | humidity | 70 | 90 | > th | dose independent | rect. | 21 | 13 |
| 874 | 158.33 | humidity | 70 | 10 | > th | dose independent | rect. | 21 | 13 |
| 890 | 158.43 | radiation | 30 | 720 | > th | dose independent | rect. | 16 | 16 |
| 891 | 158.45 | humidity | 70 | 90 | > th | dose independent | rect. | 23 | 11 |
| 892 | 158.48 | radiation | 30 | 30 | < th | dose independent | rect. | 4 | 7 |
| 898 | 158.52 | wind | 3 | 10 | > th | dose independent | rect. | 3 | 5 |
| 908 | 158.57 | radiation | 30 | 720 | > th | dose independent | rect. | 7 | 1 |
| 924 | 158.63 | radiation | 30 | 30 | < th | dose independent | rect. | 23 | 12 |
| 949 | 158.78 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 11 | 1 |
| 955 | 158.88 | wind | 3 | 10 | > th | dose independent | rect. | 3 | 1 |
| 958 | 158.88 | wind | 3 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 987 | 159.17 | humidity | 70 | 30 | > th | dose independent | rect. | 4 | 7 |