BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0109900 Os03g0109900|AK071535
(149 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0109900 Peptidase, trypsin-like serine and cysteine do... 311 9e-86
Os06g0142000 Similar to Ribosome biogenesis regulatory prot... 179 8e-46
Os03g0846400 Peptidase, trypsin-like serine and cysteine do... 170 4e-43
Os01g0776500 Peptidase, trypsin-like serine and cysteine do... 159 5e-40
Os07g0665700 Peptidase, trypsin-like serine and cysteine do... 125 1e-29
Os06g0613800 Peptidase, trypsin-like serine and cysteine do... 115 1e-26
Os07g0665300 Peptidase, trypsin-like serine and cysteine do... 110 3e-25
Os10g0474300 Peptidase, trypsin-like serine and cysteine do... 109 7e-25
Os10g0474933 Peptidase, trypsin-like serine and cysteine do... 108 2e-24
Os09g0436700 Peptidase, trypsin-like serine and cysteine do... 99 9e-22
Os09g0436300 Peptidase, trypsin-like serine and cysteine do... 80 5e-16
Os12g0141600 Peptidase, trypsin-like serine and cysteine do... 77 6e-15
Os01g0278600 Peptidase, trypsin-like serine and cysteine do... 76 8e-15
>Os03g0109900 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 149
Score = 311 bits (798), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 SSLYHLQIEVLLPNKQRVEGMLQHCNLHYNVALVSVGYRALRPAHGQLDWWGKSSKVVAV 60
SSLYHLQIEVLLPNKQRVEGMLQHCNLHYNVALVSVGYRALRPAHGQLDWWGKSSKVVAV
Sbjct: 1 SSLYHLQIEVLLPNKQRVEGMLQHCNLHYNVALVSVGYRALRPAHGQLDWWGKSSKVVAV 60
Query: 61 GRCFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTR 120
GRCFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTR
Sbjct: 61 GRCFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTR 120
Query: 121 IGTPFLSWEVIVDIVASFEEKRWPVPMPY 149
IGTPFLSWEVIVDIVASFEEKRWPVPMPY
Sbjct: 121 IGTPFLSWEVIVDIVASFEEKRWPVPMPY 149
>Os06g0142000 Similar to Ribosome biogenesis regulatory protein homolog
Length = 679
Score = 179 bits (453), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 107/152 (70%), Gaps = 18/152 (11%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSVGYRALRPAHGQLDWWGKSSKVVAVGRCF 64
+L+I+V L N Q EG L+HCNLHYN+ALVSV YRALRP + D KSS+VVAVGRCF
Sbjct: 282 NLRIKVFL-NNQCKEGKLEHCNLHYNIALVSVKYRALRPLNTSFDC--KSSRVVAVGRCF 338
Query: 65 KSGALMAASGTVTPWTGTLDCDFLERSSCKITK---------------AGIGGPVVTLDG 109
SG LMA SG + PWTGTLDC FL S+CKITK AGIG P+V LDG
Sbjct: 339 NSGTLMATSGRLVPWTGTLDCQFLACSTCKITKLKYGHGKVLWNMNRTAGIGSPLVNLDG 398
Query: 110 DCIGMNFYDTRIGTPFLSWEVIVDIVASFEEK 141
+ IGMNFYDTRIGTPFL WE I I+ASFE K
Sbjct: 399 NVIGMNFYDTRIGTPFLLWEEICKILASFETK 430
>Os03g0846400 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 610
Score = 170 bits (430), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 113/176 (64%), Gaps = 32/176 (18%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSVGYRAL--RPAHGQLDWWGKSSKVVAVGR 62
+L+IEVLLPN+QR +G LQH +LHYNVALVSV RPA+ +LD +V A+GR
Sbjct: 405 NLRIEVLLPNEQRRQGTLQHYSLHYNVALVSVNDMDFHARPANMKLDNEC-PPQVAALGR 463
Query: 63 CFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTRIG 122
CF+SG +MA G + WTGTLDC+FL RSSCK TKAGIGGP++ LDG IGMNFYD +IG
Sbjct: 464 CFESGKIMAVCGDLVDWTGTLDCNFLIRSSCKTTKAGIGGPLIGLDGKVIGMNFYDKKIG 523
Query: 123 TPFLSWEVIVDIVASFEEK-----------------------------RWPVPMPY 149
TP++ W+VI+ I+A FE + RWPVP+PY
Sbjct: 524 TPYMPWDVILKILACFENESSAAEVGNGSDPSDAPGWKIPGDGSVKLNRWPVPLPY 579
>Os01g0776500 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 385
Score = 159 bits (403), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSV-GYRALRPAHGQLDWWGKSSKVVAVGRC 63
+L+IEVLLPNK+R EG L+HCNLHYNVA+VSV +RAL PA+ + V+AVGRC
Sbjct: 181 NLRIEVLLPNKKRTEGTLEHCNLHYNVAIVSVKDFRALCPANLHHEQESVCEDVLAVGRC 240
Query: 64 FKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTRIGT 123
F+S LMAASG + W+GTLDC L ++ KITKAGIGGP++ DG +G+NF+D +GT
Sbjct: 241 FESDILMAASGHLVGWSGTLDCRMLRYANFKITKAGIGGPLIDFDGRYVGINFFDDIVGT 300
Query: 124 PFLSWEVIVDIVASFEEKR 142
PFLS VI+ +++ F+E+R
Sbjct: 301 PFLSCTVILHVLSRFDEER 319
>Os07g0665700 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 637
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 96/155 (61%), Gaps = 14/155 (9%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSV-GYRALRPAHGQLDWWGKSSKVVAVGRC 63
+L+I V LPNKQ+ G LQH +LHYNVA+VS+ G+R LR + +V++VGR
Sbjct: 461 NLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKGFRCLRTEEFHDPGLIERKEVLSVGRV 520
Query: 64 FKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTRIGT 123
FKS LMA SG +T LDC L+ S+C+I+KAGIGGP++ G+ +GMNFY R T
Sbjct: 521 FKSAKLMATSGILTDKPSKLDCKELKVSTCRISKAGIGGPLIDCHGNFVGMNFYG-RKET 579
Query: 124 PFLSWEVIVDIVASFE------------EKRWPVP 146
P+L + I+ +++ F+ + RWPVP
Sbjct: 580 PYLPRDTILKLLSYFDGEGDISPEIMDNQNRWPVP 614
Score = 106 bits (264), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 85/141 (60%), Gaps = 7/141 (4%)
Query: 6 LQIEVLLPNKQRVEGMLQHCNLHYNVALVSV----GYRALRPAHGQLDWWGKSSKVVAVG 61
+ IEV LP KQ G L +L YN+A++ G RA+ H QL + S KVVAVG
Sbjct: 137 VSIEVHLPKKQVAHGWLYKYDLQYNIAVIETKFFPGLRAINLEH-QLQFESHS-KVVAVG 194
Query: 62 RCFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTRI 121
RCFKSG LMA SG +T + L S+C+IT AG+GGP++ LDG+ +GMNFY +
Sbjct: 195 RCFKSGKLMATSGVLTDDPSGVYRKELMISTCEITMAGVGGPLIDLDGNFVGMNFY-AKK 253
Query: 122 GTPFLSWEVIVDIVASFEEKR 142
TPFL I + +A+F+ R
Sbjct: 254 RTPFLPRSTITECMANFKTYR 274
>Os06g0613800 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 499
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 92/139 (66%), Gaps = 7/139 (5%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSV-GYRALRPAHGQLDWWGK---SSKVVAV 60
+L+I+V LPNK+ G LQHCNL YN+A+VSV G+ LR A +LD + +VVA+
Sbjct: 363 NLKIKVYLPNKRIAVGELQHCNLSYNIAVVSVKGFCCLRTA--ELDKQMQIEPHREVVAI 420
Query: 61 GRCFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTR 120
GR F+SG LMA SG ++ LDC L S+CKITKAGIGGP++ DG+ +G+NFY T+
Sbjct: 421 GRIFESGKLMATSGILSDEESKLDCRELMISTCKITKAGIGGPLIDFDGNFVGINFYGTK 480
Query: 121 IGTPFLSWEVIVDIVASFE 139
T +L +I ++ F+
Sbjct: 481 -ETHYLPRLMIQRLLKDFD 498
>Os07g0665300 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 254
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSV-GYRALRPAHGQLDWWGKSSKVVAVGRC 63
+L+I V LPNKQ+ G LQH +LHYNVA+VS+ G+R LR K KV++VGR
Sbjct: 140 NLKIVVHLPNKQQTVGTLQHYHLHYNVAIVSIKGFRCLRTEEFHDPGQIKCKKVLSVGRV 199
Query: 64 FKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGM 114
FKSG LMA G +T LDC L S+C+ITKAGIGGP++ DG+ +GM
Sbjct: 200 FKSGKLMATGGILTDKPSKLDCKELMVSTCRITKAGIGGPLIDFDGNFVGM 250
>Os10g0474300 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 690
Score = 109 bits (273), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 34/175 (19%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSV--GYRALRPAHGQLDWWGK-----SSKV 57
+L IEV LP QR G L+ NL+YN+A+VS+ + A+R D + K S KV
Sbjct: 498 NLTIEVFLPPNQRCCGTLEFYNLNYNIAIVSLKKNFNAVRLE----DIFSKTVQEPSEKV 553
Query: 58 VAVGRCFKSGALMAASGTVTPWTG--TLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMN 115
VA+GR + G LMA G V LDC L+ S+CKI KAGIGGP++ DG +GMN
Sbjct: 554 VAIGRDTRLGPLMATIGNVKRGKKGCKLDCKDLKLSTCKIKKAGIGGPLINFDGSFVGMN 613
Query: 116 FYDTRIGTPFLSWEVIVDIVASF---------------------EEKRWPVPMPY 149
FYD TPFL IV++++ ++ RWPVP PY
Sbjct: 614 FYDGSEATPFLPRHKIVEVLSRVNDLPSESGCNNPMPIDIGEGTKKNRWPVPEPY 668
>Os10g0474933 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 800
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 88/141 (62%), Gaps = 10/141 (7%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSV--GYRALRPAH---GQLDWWGKSSKVVA 59
+L+IEV LP QR G+L+ +L+YN+A+VS+ + A+RP + G ++ S KVVA
Sbjct: 409 NLKIEVFLPPNQRGSGILEFYSLNYNIAIVSLKRNFNAVRPENIFSGTVEM--PSEKVVA 466
Query: 60 VGRCFKSGALMAASGTVTPWTGT---LDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNF 116
+GR G LMA G V LDC L+ S+CKITKAGIGGP++ DG +GMNF
Sbjct: 467 IGRDVTLGPLMATIGKVIQHGKNNCKLDCKDLKVSTCKITKAGIGGPLIKFDGSFVGMNF 526
Query: 117 YDTRIGTPFLSWEVIVDIVAS 137
YD TPFL + IV ++++
Sbjct: 527 YDGSRVTPFLPKDKIVKVLST 547
>Os09g0436700 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 489
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 85/143 (59%), Gaps = 8/143 (5%)
Query: 5 HLQIEVLLPNKQRVEGMLQHCNLHYNVALVSVG------YRALRPAHGQLDWWGKSSK-V 57
L+I V LP+ ++ EG + + +L+YN+ LV+V ++ G D +G SK V
Sbjct: 195 ELKINVWLPSGEKCEGFISNVDLYYNICLVTVHCTSNLPKKSFNDDTGFFDLYGNHSKDV 254
Query: 58 VAVGRCFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFY 117
VA+GR + +L ASG + P DC+ L SSCKITK G+GGP++ +G+ +GMNFY
Sbjct: 255 VALGRSCEPWSLKVASGKLIPRRHRFDCEELLVSSCKITKIGVGGPLMDFNGNIVGMNFY 314
Query: 118 DTRIGTPFLSWEVIVDIVASFEE 140
D + TPFL +++ + F+E
Sbjct: 315 DKK-ETPFLPSFIVLKCLQHFKE 336
>Os09g0436300 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 394
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 6 LQIEVLLPNKQRVEGMLQHCNLHYNVALVSVGYRALRPAHGQLD----WWGKSSKVVAVG 61
++IEVLL NK EG L C+L YN+A+V++ + P D + V+AV
Sbjct: 124 VKIEVLLHNKTITEGFLAMCSLQYNIAVVTIEPQFDLPLVKLHDVPVCYSMLCRPVIAVA 183
Query: 62 RCFKSGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTRI 121
R FKS L+ G +T LDCD L +C ++K IGG V+ L+ +G+ FYD +
Sbjct: 184 RNFKSKTLLVRCGEMTRERSELDCDELLVCTCPVSKVFIGGLVMDLERRILGITFYD-KD 242
Query: 122 GTPFLSWEVIVDIVASFEEKR 142
PFL E+ V + F+ R
Sbjct: 243 TVPFLPIEIAVRCLEHFKNFR 263
>Os12g0141600 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 133
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 53/109 (48%), Gaps = 29/109 (26%)
Query: 70 MAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTRI-GTPFLSW 128
MAA G P T DC FL S C TKAGIGGP++ DG +GMNFYD + GT FLSW
Sbjct: 1 MAARGQQFPTVVTHDCKFLSYSGCTTTKAGIGGPLLCFDGTFVGMNFYDEGVEGTAFLSW 60
Query: 129 EVIVDIVASFEEK----------------------------RWPVPMPY 149
I +I+ F+ K RWPVPMPY
Sbjct: 61 CEIREILKYFKTKGAVAEHSHGNPSDVLDWKIAGDDSVHPDRWPVPMPY 109
>Os01g0278600 Peptidase, trypsin-like serine and cysteine domain containing
protein
Length = 470
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 6 LQIEVLLPNKQRVEGMLQHCNLHYNVALVSVGYRALRPAHGQLDWWGKSSKVVAVGRCFK 65
+++EV LP+ + + H+N+ALV V L + V+A+GR ++
Sbjct: 186 VRVEVFLPSGDISICQISMVDFHHNIALVEVTSNFKLQEAVILKYIIDKGDVLALGRSYE 245
Query: 66 SGALMAASGTVTPWTGTLDCDFLERSSCKITKAGIGGPVVTLDGDCIGMNFYDTRIGTPF 125
G LM + G ++ +C L SSC+IT AG GGP+V +G +G+NF++ TPF
Sbjct: 246 GGLLMCSRGEISNRASIFECSELLVSSCEITMAGTGGPLVNYNGHVVGINFFEEN-QTPF 304
Query: 126 LSWEVI 131
LS ++
Sbjct: 305 LSMAIV 310
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.138 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,328,046
Number of extensions: 204825
Number of successful extensions: 415
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 398
Number of HSP's successfully gapped: 14
Length of query: 149
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 57
Effective length of database: 12,232,113
Effective search space: 697230441
Effective search space used: 697230441
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 151 (62.8 bits)