Os07g0665300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0665300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.95 | 0.308 | 9.44 | -0.632 | 0.992 | -0.0972 | 0.144 | 0.949 | -0.173 | 12 | 20.9 | 643 | -- | -- |
| 44.58 | 0.311 | 9.45 | -0.759 | 0.996 | -0.389 | 0.00136 | -- | -0.2 | 11.9 | 18.2 | 2183 | -- | -- |
| 43.02 | 0.305 | 9.44 | -0.634 | 0.993 | -0.0908 | -- | 0.928 | -0.175 | 12 | 20.8 | 603 | -- | -- |
| 44.5 | 0.311 | 9.45 | -0.754 | 0.995 | -0.423 | -- | -- | -0.195 | 12 | 17.9 | 2326 | -- | -- |
| 101.48 | 0.469 | 9.45 | -0.608 | -- | -0.347 | -- | 0.765 | -0.128 | -- | 22.3 | 873 | -- | -- |
| 46.48 | 0.32 | 9.47 | -0.893 | 1.01 | -- | -0.0771 | -- | -0.259 | 12 | -- | -- | -- | -- |
| 46.51 | 0.319 | 9.47 | -0.896 | 1.01 | -- | -- | -- | -0.259 | 12 | -- | -- | -- | -- |
| 97.3 | 0.459 | 9.44 | -0.642 | -- | -0.571 | -- | -- | -0.0478 | -- | 25.6 | 912 | -- | -- |
| 45.85 | 0.315 | 9.39 | -- | 1.01 | -0.711 | -- | -- | 0.0333 | 11.9 | 18.5 | 46794 | -- | -- |
| 110.55 | 0.491 | 9.49 | -0.928 | -- | -- | -- | -- | -0.273 | -- | -- | -- | -- | -- |
| 67.69 | 0.385 | 9.45 | -- | 1.02 | -- | -- | -- | -0.159 | 12.1 | -- | -- | -- | -- |
| 108.33 | 0.485 | 9.43 | -- | -- | -0.832 | -- | -- | 0.0116 | -- | 17.83 | 47520 | -- | -- |
| 133.25 | 0.539 | 9.47 | -- | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.45 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 14 |
| 5 | 40.85 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 5 |
| 7 | 40.91 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 11 | 41.10 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 16 | 21 |
| 12 | 41.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 13 | 41.15 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 15 | 41.17 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 16 | 41.17 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 19 | 41.23 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 10 |
| 21 | 41.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 6 |
| 71 | 41.60 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 7 |
| 88 | 41.69 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 5 |
| 100 | 41.76 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 2 |
| 102 | 41.79 | humidity | 90.0 | 720 | < th | dose independent | rect. | 7 | 6 |
| 116 | 41.87 | temperature | 20.0 | 30 | > th | dose independent | rect. | 8 | 14 |
| 130 | 41.96 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 138 | 41.98 | temperature | 25.0 | 720 | < th | dose independent | rect. | 23 | 4 |
| 141 | 41.99 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 160 | 42.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 173 | 42.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 178 | 42.09 | temperature | 25.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 184 | 42.11 | humidity | 90.0 | 720 | < th | dose independent | rect. | 7 | 4 |
| 191 | 42.13 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 2 |
| 195 | 42.14 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 211 | 42.18 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 7 |
| 212 | 42.18 | temperature | 25.0 | 90 | > th | dose independent | rect. | 22 | 9 |
| 253 | 42.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 14 |
| 256 | 42.28 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 14 |
| 258 | 42.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 289 | 42.33 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 290 | 42.33 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 356 | 42.40 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 364 | 42.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 375 | 42.41 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 382 | 42.41 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 405 | 42.43 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 433 | 42.44 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 18 |
| 458 | 42.46 | wind | 5.0 | 90 | < th | dose independent | rect. | 22 | 10 |
| 471 | 42.47 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 473 | 42.47 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 515 | 42.50 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 517 | 42.50 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 5 |
| 521 | 42.50 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 533 | 42.51 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 1 |
| 598 | 42.54 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 24 | 7 |
| 601 | 42.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 11 |
| 619 | 42.56 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 624 | 42.56 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 649 | 42.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 652 | 42.58 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 665 | 42.59 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 679 | 42.59 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 684 | 42.59 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 693 | 42.60 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 14 |
| 711 | 42.61 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 721 | 42.61 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 743 | 42.62 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 758 | 42.63 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 18 |
| 779 | 42.63 | wind | 9.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 785 | 42.64 | wind | 3.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 815 | 42.66 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 820 | 42.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 836 | 42.67 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 14 |
| 848 | 42.68 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 850 | 42.68 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 852 | 42.68 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 862 | 42.69 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 865 | 42.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 866 | 42.69 | humidity | 80.0 | 270 | < th | dose independent | rect. | 16 | 19 |
| 883 | 42.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 904 | 42.71 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 914 | 42.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 925 | 42.71 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 18 |
| 938 | 42.72 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 944 | 42.72 | wind | 9.0 | 90 | < th | dose dependent | rect. | 22 | 10 |
| 951 | 42.73 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 953 | 42.73 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 991 | 42.74 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 998 | 42.74 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 11 |