Os12g0141600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0141600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.89 | 0.261 | 9.3 | 0.455 | 0.411 | 0.161 | -0.866 | 1.45 | 0.395 | 1.61 | 0.3089 | 3965 | -- | -- |
| 31.21 | 0.26 | 9.32 | 0.41 | 0.407 | 0.491 | -0.847 | -- | 0.402 | 1.61 | 0.5001 | 3775 | -- | -- |
| 33.84 | 0.271 | 9.29 | 0.507 | 0.411 | 0.0759 | -- | 1.62 | 0.393 | 1.75 | 0.376 | 3969 | -- | -- |
| 33.24 | 0.269 | 9.33 | 0.415 | 0.398 | 0.428 | -- | -- | 0.393 | 1.61 | 0.563 | 17179 | -- | -- |
| 43.86 | 0.308 | 9.28 | 0.561 | -- | -0.0179 | -- | 2.07 | 0.404 | -- | 0.4156 | 3682 | -- | -- |
| 36.12 | 0.282 | 9.33 | 0.559 | 0.422 | -- | -0.801 | -- | 0.366 | 1.62 | -- | -- | -- | -- |
| 38.66 | 0.291 | 9.33 | 0.585 | 0.423 | -- | -- | -- | 0.371 | 1.77 | -- | -- | -- | -- |
| 44.18 | 0.31 | 9.32 | 0.387 | -- | 0.477 | -- | -- | 0.416 | -- | 0.5 | 16636 | -- | -- |
| 35.37 | 0.277 | 9.33 | -- | 0.434 | 0.63 | -- | -- | 0.393 | 1.84 | 0.9276 | 21589 | -- | -- |
| 49.53 | 0.329 | 9.33 | 0.602 | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
| 47.69 | 0.323 | 9.35 | -- | 0.434 | -- | -- | -- | 0.306 | 1.81 | -- | -- | -- | -- |
| 46.84 | 0.319 | 9.32 | -- | -- | 0.625 | -- | -- | 0.413 | -- | 0.9208 | 21544 | -- | -- |
| 59.1 | 0.359 | 9.34 | -- | -- | -- | -- | -- | 0.313 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.72 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 18 |
| 2 | 29.75 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 18 |
| 3 | 29.75 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 18 |
| 10 | 29.83 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 18 |
| 11 | 29.87 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 3 | 15 |
| 12 | 29.87 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 3 | 15 |
| 14 | 29.89 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 3 | 15 |
| 19 | 29.93 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 3 | 15 |
| 40 | 30.09 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 41 | 30.10 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 3 | NA |
| 42 | 30.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 44 | 30.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 47 | 30.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 52 | 30.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 79 | 30.17 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 3 | NA |
| 86 | 30.17 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 3 | NA |
| 89 | 30.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 92 | 30.18 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 93 | 30.18 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 96 | 30.18 | precipitation | 0.1 | 1440 | > th | dose dependent | sin | 3 | NA |
| 97 | 30.18 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 105 | 30.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 124 | 30.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 130 | 30.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 142 | 30.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 160 | 30.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 175 | 30.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 21 |
| 176 | 30.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 182 | 30.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 202 | 30.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 207 | 30.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 5 |
| 209 | 30.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 215 | 30.29 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 238 | 30.31 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 248 | 30.31 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 270 | 30.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 360 | 30.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 361 | 30.39 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 364 | 30.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 392 | 30.42 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 395 | 30.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 410 | 30.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 423 | 30.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 444 | 30.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 493 | 30.48 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 4 | 9 |
| 546 | 30.52 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 573 | 30.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 597 | 30.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 598 | 30.55 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 9 |
| 635 | 30.57 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 742 | 30.62 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 748 | 30.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 784 | 30.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 847 | 30.68 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 3 | 13 |
| 873 | 30.71 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 892 | 30.72 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 902 | 30.72 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 922 | 30.74 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 931 | 30.74 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 956 | 30.76 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 980 | 30.77 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |