Os09g0436700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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Os09g0436700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.24 | 0.227 | 11.1 | -1.41 | 0.534 | -1.52 | 0.18 | 0.549 | -0.281 | 8.68 | 28.83 | 1203 | -- | -- |
| 23.44 | 0.225 | 11.1 | -1.3 | 0.556 | -1.54 | 0.241 | -- | -0.258 | 8.75 | 28.38 | 1161 | -- | -- |
| 23.28 | 0.225 | 11.1 | -1.41 | 0.558 | -1.53 | -- | 0.604 | -0.287 | 8.66 | 28.78 | 1159 | -- | -- |
| 23.59 | 0.226 | 11 | -1.29 | 0.561 | -1.55 | -- | -- | -0.257 | 8.7 | 28.2 | 1153 | -- | -- |
| 36.33 | 0.281 | 11.1 | -1.4 | -- | -1.52 | -- | 0.428 | -0.278 | -- | 28 | 1407 | -- | -- |
| 58.35 | 0.358 | 11 | -0.828 | 0.503 | -- | -0.048 | -- | 0.0879 | 7.38 | -- | -- | -- | -- |
| 58.36 | 0.358 | 11 | -0.829 | 0.502 | -- | -- | -- | 0.0881 | 7.41 | -- | -- | -- | -- |
| 36.47 | 0.281 | 11.1 | -1.3 | -- | -1.54 | -- | -- | -0.254 | -- | 27.57 | 1412 | -- | -- |
| 60.55 | 0.362 | 11 | -- | 0.8 | -1.11 | -- | -- | 0.0152 | 7.15 | 30.9 | 494 | -- | -- |
| 71.81 | 0.396 | 11 | -0.821 | -- | -- | -- | -- | 0.0963 | -- | -- | -- | -- | -- |
| 76.47 | 0.409 | 11 | -- | 0.495 | -- | -- | -- | 0.18 | 7.52 | -- | -- | -- | -- |
| 74.52 | 0.402 | 11 | -- | -- | -0.9 | -- | -- | 0.0156 | -- | 29.3 | 1381 | -- | -- |
| 89.59 | 0.442 | 11 | -- | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 16 |
| 4 | 23.16 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 10 | 23.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 10 |
| 13 | 23.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 14 | 23.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 71 | 23.42 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 76 | 23.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 78 | 23.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 377 | 24.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 21 |
| 442 | 24.12 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 541 | 24.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 643 | 24.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 709 | 24.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 22 |