Os10g0474300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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Os10g0474300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.9 | 0.311 | 1040 | -6320 | 0.107 | 197000 | -0.277 | -1200000 | 0.055 | 5.13 | 1 | 4 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 45.84 | 0.317 | 3 | -0.0777 | 0.0945 | -- | -0.429 | -- | 0.0511 | 6.78 | -- | -- | -- | -- |
| 46.3 | 0.319 | 3 | -0.0851 | 0.0934 | -- | -- | -- | 0.0521 | 6.61 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 46.76 | 0.32 | 3 | -0.0828 | -- | -- | -- | -- | 0.054 | -- | -- | -- | -- | -- |
| 46.5 | 0.319 | 3 | -- | 0.0923 | -- | -- | -- | 0.0616 | 6.66 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 46.94 | 0.32 | 3 | -- | -- | -- | -- | -- | 0.0632 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.59 | atmosphere | 995 | 90 | > th | dose independent | sin | 9 | NA |
| 6 | 42.66 | radiation | 30 | 30 | > th | dose dependent | rect. | 13 | 21 |
| 8 | 42.67 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 15 | 42.67 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 24 | 42.71 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 2 |
| 25 | 42.71 | wind | 9 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 26 | 42.72 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 39 | 42.72 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 52 | 42.73 | temperature | 30 | 10 | > th | dose independent | rect. | 17 | 1 |
| 60 | 42.77 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 127 | 42.84 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 153 | 42.84 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 215 | 42.89 | atmosphere | 995 | 90 | < th | dose independent | sin | 9 | NA |
| 216 | 42.89 | atmosphere | 995 | 90 | < th | dose dependent | sin | 9 | NA |
| 262 | 42.91 | atmosphere | 995 | 10 | < th | dose independent | sin | 8 | NA |
| 335 | 42.92 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 615 | 43.05 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 656 | 43.18 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 710 | 43.29 | radiation | 30 | 10 | > th | dose independent | rect. | 13 | 1 |
| 719 | 43.36 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 737 | 43.38 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 1 |
| 741 | 43.40 | radiation | 30 | 30 | > th | dose independent | rect. | 12 | 22 |
| 744 | 43.41 | radiation | 30 | 30 | > th | dose dependent | sin | 13 | NA |
| 748 | 43.44 | radiation | 30 | 10 | > th | dose dependent | rect. | 13 | 2 |
| 765 | 43.45 | atmosphere | 995 | 270 | > th | dose independent | rect. | 10 | 11 |
| 789 | 43.51 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 3 | 1 |
| 792 | 43.52 | humidity | 80 | 720 | > th | dose independent | rect. | 23 | 9 |
| 800 | 43.54 | atmosphere | 995 | 270 | > th | dose independent | sin | 2 | NA |
| 804 | 43.55 | atmosphere | 995 | 270 | > th | dose independent | sin | 4 | NA |
| 819 | 43.58 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 14 | 4 |
| 822 | 43.59 | atmosphere | 995 | 270 | > th | dose independent | sin | 23 | NA |
| 824 | 43.60 | radiation | 40 | 10 | < th | dose independent | sin | 13 | NA |
| 850 | 43.62 | radiation | 1 | 30 | > th | dose dependent | rect. | 12 | 19 |
| 871 | 43.65 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 877 | 43.67 | radiation | 30 | 90 | > th | dose independent | rect. | 12 | 2 |
| 879 | 43.68 | temperature | 30 | 10 | > th | dose independent | sin | 11 | NA |
| 882 | 43.68 | radiation | 10 | 30 | > th | dose independent | rect. | 12 | 19 |
| 895 | 43.70 | wind | 3 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 963 | 43.74 | humidity | 70 | 270 | > th | dose independent | rect. | 7 | 2 |